Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0516:0598
Extra
PDB:
ATOM 1 O3' U A 515 11.412 145.762 91.656 1.00 56.51 O
ATOM 2 P G A 516 11.357 145.232 93.172 1.00 57.34 P
ATOM 3 OP1 G A 516 9.982 145.504 93.666 1.00 56.45 O
ATOM 4 OP2 G A 516 12.524 145.783 93.911 1.00 57.43 O
ATOM 5 O5' G A 516 11.558 143.658 93.042 1.00 54.06 O
ATOM 6 C5' G A 516 10.540 142.843 92.451 1.00 54.75 C
ATOM 7 C4' G A 516 11.011 141.417 92.325 1.00 55.46 C
ATOM 8 O4' G A 516 12.112 141.344 91.383 1.00 57.33 O
ATOM 9 C3' G A 516 11.579 140.786 93.582 1.00 55.74 C
ATOM 10 O3' G A 516 10.572 140.337 94.467 1.00 56.02 O
ATOM 11 C2' G A 516 12.388 139.635 93.007 1.00 56.29 C
ATOM 12 O2' G A 516 11.567 138.557 92.607 1.00 56.97 O
ATOM 13 C1' G A 516 13.002 140.304 91.774 1.00 56.34 C
ATOM 14 N9 G A 516 14.313 140.884 92.066 1.00 54.87 N
ATOM 15 C8 G A 516 14.620 142.207 92.301 1.00 54.12 C
ATOM 16 N7 G A 516 15.886 142.402 92.549 1.00 52.48 N
ATOM 17 C5 G A 516 16.450 141.137 92.467 1.00 52.56 C
ATOM 18 C6 G A 516 17.792 140.716 92.635 1.00 51.65 C
ATOM 19 O6 G A 516 18.787 141.402 92.895 1.00 49.70 O
ATOM 20 N1 G A 516 17.919 139.340 92.468 1.00 51.31 N
ATOM 21 C2 G A 516 16.887 138.479 92.177 1.00 51.14 C
ATOM 22 N2 G A 516 17.203 137.185 92.047 1.00 51.10 N
ATOM 23 N3 G A 516 15.636 138.858 92.022 1.00 51.70 N
ATOM 24 C4 G A 516 15.490 140.190 92.174 1.00 53.13 C
ATOM 25 P G A 517 10.759 140.543 96.048 1.00 56.69 P
ATOM 26 OP1 G A 517 9.430 140.292 96.657 1.00 58.36 O
ATOM 27 OP2 G A 517 11.442 141.844 96.292 1.00 56.78 O
ATOM 28 O5' G A 517 11.746 139.369 96.479 1.00 54.70 O
TER
ATOM 1 O3' U B 597 14.549 128.967 85.563 1.00 52.75 O
ATOM 2 P G B 598 15.642 128.784 86.735 1.00 53.95 P
ATOM 3 OP1 G B 598 16.977 128.756 86.070 1.00 53.53 O
ATOM 4 OP2 G B 598 15.231 127.644 87.601 1.00 54.29 O
ATOM 5 O5' G B 598 15.523 130.129 87.585 1.00 49.16 O
ATOM 6 C5' G B 598 15.933 131.379 87.014 1.00 46.53 C
ATOM 7 C4' G B 598 15.690 132.508 87.976 1.00 44.19 C
ATOM 8 O4' G B 598 14.271 132.678 88.169 1.00 43.48 O
ATOM 9 C3' G B 598 16.210 132.316 89.383 1.00 45.08 C
ATOM 10 O3' G B 598 17.600 132.575 89.485 1.00 46.68 O
ATOM 11 C2' G B 598 15.386 133.329 90.155 1.00 45.12 C
ATOM 12 O2' G B 598 15.856 134.647 89.993 1.00 48.34 O
ATOM 13 C1' G B 598 14.032 133.187 89.465 1.00 43.22 C
ATOM 14 N9 G B 598 13.167 132.261 90.179 1.00 42.19 N
ATOM 15 C8 G B 598 12.837 130.972 89.833 1.00 42.37 C
ATOM 16 N7 G B 598 12.051 130.395 90.702 1.00 43.49 N
ATOM 17 C5 G B 598 11.847 131.365 91.677 1.00 44.15 C
ATOM 18 C6 G B 598 11.078 131.329 92.883 1.00 43.92 C
ATOM 19 O6 G B 598 10.407 130.397 93.350 1.00 43.00 O
ATOM 20 N1 G B 598 11.145 132.540 93.565 1.00 43.79 N
ATOM 21 C2 G B 598 11.860 133.644 93.152 1.00 43.88 C
ATOM 22 N2 G B 598 11.800 134.724 93.945 1.00 44.01 N
ATOM 23 N3 G B 598 12.581 133.687 92.043 1.00 42.80 N
ATOM 24 C4 G B 598 12.528 132.523 91.361 1.00 43.30 C
ATOM 25 P U B 599 18.494 131.701 90.489 1.00 47.14 P
ATOM 26 OP1 U B 599 19.907 131.943 90.131 1.00 46.02 O
ATOM 27 OP2 U B 599 17.968 130.307 90.497 1.00 48.99 O
ATOM 28 O5' U B 599 18.187 132.324 91.917 1.00 45.88 O
TER
ATOM 2 P G A 516 11.357 145.232 93.172 1.00 57.34 P
ATOM 3 OP1 G A 516 9.982 145.504 93.666 1.00 56.45 O
ATOM 4 OP2 G A 516 12.524 145.783 93.911 1.00 57.43 O
ATOM 5 O5' G A 516 11.558 143.658 93.042 1.00 54.06 O
ATOM 6 C5' G A 516 10.540 142.843 92.451 1.00 54.75 C
ATOM 7 C4' G A 516 11.011 141.417 92.325 1.00 55.46 C
ATOM 8 O4' G A 516 12.112 141.344 91.383 1.00 57.33 O
ATOM 9 C3' G A 516 11.579 140.786 93.582 1.00 55.74 C
ATOM 10 O3' G A 516 10.572 140.337 94.467 1.00 56.02 O
ATOM 11 C2' G A 516 12.388 139.635 93.007 1.00 56.29 C
ATOM 12 O2' G A 516 11.567 138.557 92.607 1.00 56.97 O
ATOM 13 C1' G A 516 13.002 140.304 91.774 1.00 56.34 C
ATOM 14 N9 G A 516 14.313 140.884 92.066 1.00 54.87 N
ATOM 15 C8 G A 516 14.620 142.207 92.301 1.00 54.12 C
ATOM 16 N7 G A 516 15.886 142.402 92.549 1.00 52.48 N
ATOM 17 C5 G A 516 16.450 141.137 92.467 1.00 52.56 C
ATOM 18 C6 G A 516 17.792 140.716 92.635 1.00 51.65 C
ATOM 19 O6 G A 516 18.787 141.402 92.895 1.00 49.70 O
ATOM 20 N1 G A 516 17.919 139.340 92.468 1.00 51.31 N
ATOM 21 C2 G A 516 16.887 138.479 92.177 1.00 51.14 C
ATOM 22 N2 G A 516 17.203 137.185 92.047 1.00 51.10 N
ATOM 23 N3 G A 516 15.636 138.858 92.022 1.00 51.70 N
ATOM 24 C4 G A 516 15.490 140.190 92.174 1.00 53.13 C
ATOM 25 P G A 517 10.759 140.543 96.048 1.00 56.69 P
ATOM 26 OP1 G A 517 9.430 140.292 96.657 1.00 58.36 O
ATOM 27 OP2 G A 517 11.442 141.844 96.292 1.00 56.78 O
ATOM 28 O5' G A 517 11.746 139.369 96.479 1.00 54.70 O
TER
ATOM 1 O3' U B 597 14.549 128.967 85.563 1.00 52.75 O
ATOM 2 P G B 598 15.642 128.784 86.735 1.00 53.95 P
ATOM 3 OP1 G B 598 16.977 128.756 86.070 1.00 53.53 O
ATOM 4 OP2 G B 598 15.231 127.644 87.601 1.00 54.29 O
ATOM 5 O5' G B 598 15.523 130.129 87.585 1.00 49.16 O
ATOM 6 C5' G B 598 15.933 131.379 87.014 1.00 46.53 C
ATOM 7 C4' G B 598 15.690 132.508 87.976 1.00 44.19 C
ATOM 8 O4' G B 598 14.271 132.678 88.169 1.00 43.48 O
ATOM 9 C3' G B 598 16.210 132.316 89.383 1.00 45.08 C
ATOM 10 O3' G B 598 17.600 132.575 89.485 1.00 46.68 O
ATOM 11 C2' G B 598 15.386 133.329 90.155 1.00 45.12 C
ATOM 12 O2' G B 598 15.856 134.647 89.993 1.00 48.34 O
ATOM 13 C1' G B 598 14.032 133.187 89.465 1.00 43.22 C
ATOM 14 N9 G B 598 13.167 132.261 90.179 1.00 42.19 N
ATOM 15 C8 G B 598 12.837 130.972 89.833 1.00 42.37 C
ATOM 16 N7 G B 598 12.051 130.395 90.702 1.00 43.49 N
ATOM 17 C5 G B 598 11.847 131.365 91.677 1.00 44.15 C
ATOM 18 C6 G B 598 11.078 131.329 92.883 1.00 43.92 C
ATOM 19 O6 G B 598 10.407 130.397 93.350 1.00 43.00 O
ATOM 20 N1 G B 598 11.145 132.540 93.565 1.00 43.79 N
ATOM 21 C2 G B 598 11.860 133.644 93.152 1.00 43.88 C
ATOM 22 N2 G B 598 11.800 134.724 93.945 1.00 44.01 N
ATOM 23 N3 G B 598 12.581 133.687 92.043 1.00 42.80 N
ATOM 24 C4 G B 598 12.528 132.523 91.361 1.00 43.30 C
ATOM 25 P U B 599 18.494 131.701 90.489 1.00 47.14 P
ATOM 26 OP1 U B 599 19.907 131.943 90.131 1.00 46.02 O
ATOM 27 OP2 U B 599 17.968 130.307 90.497 1.00 48.99 O
ATOM 28 O5' U B 599 18.187 132.324 91.917 1.00 45.88 O
TER
Atoms:
OP1: (9.982,145.504,93.666)
OP2: (12.524,145.783,93.911)
C3': (11.579,140.786,93.582)
C1': (13.002,140.304,91.774)
C5': (10.540,142.843,92.451)
O6: (18.787,141.402,92.895)
O4': (12.112,141.344,91.383)
C8: (14.620,142.207,92.301)
C2: (16.887,138.479,92.177)
C6: (17.792,140.716,92.635)
C5: (16.450,141.137,92.467)
C4: (15.490,140.190,92.174)
P: (11.357,145.232,93.172)
C4': (11.011,141.417,92.325)
C2': (12.388,139.635,93.007)
O2': (11.567,138.557,92.607)
N1: (17.919,139.340,92.468)
N2: (17.203,137.185,92.047)
N3: (15.636,138.858,92.022)
N7: (15.886,142.402,92.549)
N9: (14.313,140.884,92.066)
O5': (11.558,143.658,93.042)
O3': (10.572,140.337,94.467)
OP2: (12.524,145.783,93.911)
C3': (11.579,140.786,93.582)
C1': (13.002,140.304,91.774)
C5': (10.540,142.843,92.451)
O6: (18.787,141.402,92.895)
O4': (12.112,141.344,91.383)
C8: (14.620,142.207,92.301)
C2: (16.887,138.479,92.177)
C6: (17.792,140.716,92.635)
C5: (16.450,141.137,92.467)
C4: (15.490,140.190,92.174)
P: (11.357,145.232,93.172)
C4': (11.011,141.417,92.325)
C2': (12.388,139.635,93.007)
O2': (11.567,138.557,92.607)
N1: (17.919,139.340,92.468)
N2: (17.203,137.185,92.047)
N3: (15.636,138.858,92.022)
N7: (15.886,142.402,92.549)
N9: (14.313,140.884,92.066)
O5': (11.558,143.658,93.042)
O3': (10.572,140.337,94.467)
OP1: (16.977,128.756,86.070)
OP2: (15.231,127.644,87.601)
C3': (16.210,132.316,89.383)
C1': (14.032,133.187,89.465)
C5': (15.933,131.379,87.014)
O6: (10.407,130.397,93.350)
O4': (14.271,132.678,88.169)
C8: (12.837,130.972,89.833)
C2: (11.860,133.644,93.152)
C6: (11.078,131.329,92.883)
C5: (11.847,131.365,91.677)
C4: (12.528,132.523,91.361)
P: (15.642,128.784,86.735)
C4': (15.690,132.508,87.976)
C2': (15.386,133.329,90.155)
O2': (15.856,134.647,89.993)
N1: (11.145,132.540,93.565)
N2: (11.800,134.724,93.945)
N3: (12.581,133.687,92.043)
N7: (12.051,130.395,90.702)
N9: (13.167,132.261,90.179)
O5': (15.523,130.129,87.585)
O3': (17.600,132.575,89.485)
OP2: (15.231,127.644,87.601)
C3': (16.210,132.316,89.383)
C1': (14.032,133.187,89.465)
C5': (15.933,131.379,87.014)
O6: (10.407,130.397,93.350)
O4': (14.271,132.678,88.169)
C8: (12.837,130.972,89.833)
C2: (11.860,133.644,93.152)
C6: (11.078,131.329,92.883)
C5: (11.847,131.365,91.677)
C4: (12.528,132.523,91.361)
P: (15.642,128.784,86.735)
C4': (15.690,132.508,87.976)
C2': (15.386,133.329,90.155)
O2': (15.856,134.647,89.993)
N1: (11.145,132.540,93.565)
N2: (11.800,134.724,93.945)
N3: (12.581,133.687,92.043)
N7: (12.051,130.395,90.702)
N9: (13.167,132.261,90.179)
O5': (15.523,130.129,87.585)
O3': (17.600,132.575,89.485)
Image (generated by PyMOL):