ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0649:0734

Extra

PDB:
ATOM 1 O3' A A 648 36.693 77.119 34.145 1.00 44.37 O
ATOM 2 P G A 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 3 OP1 G A 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 4 OP2 G A 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 5 O5' G A 649 34.959 78.784 33.394 1.00 43.92 O
ATOM 6 C5' G A 649 35.228 80.182 33.566 1.00 44.12 C
ATOM 7 C4' G A 649 35.444 80.508 35.028 1.00 43.46 C
ATOM 8 O4' G A 649 36.692 79.925 35.489 1.00 42.77 O
ATOM 9 C3' G A 649 35.626 81.989 35.288 1.00 42.51 C
ATOM 10 O3' G A 649 34.370 82.633 35.388 1.00 43.47 O
ATOM 11 C2' G A 649 36.398 81.998 36.593 1.00 42.73 C
ATOM 12 O2' G A 649 35.578 81.762 37.714 1.00 45.70 O
ATOM 13 C1' G A 649 37.339 80.814 36.380 1.00 41.65 C
ATOM 14 N9 G A 649 38.599 81.237 35.776 1.00 42.72 N
ATOM 15 C8 G A 649 39.073 80.944 34.519 1.00 42.63 C
ATOM 16 N7 G A 649 40.235 81.485 34.272 1.00 41.92 N
ATOM 17 C5 G A 649 40.547 82.175 35.434 1.00 42.34 C
ATOM 18 C6 G A 649 41.686 82.946 35.769 1.00 42.51 C
ATOM 19 O6 G A 649 42.669 83.209 35.075 1.00 42.02 O
ATOM 20 N1 G A 649 41.605 83.438 37.064 1.00 43.37 N
ATOM 21 C2 G A 649 40.558 83.230 37.927 1.00 44.07 C
ATOM 22 N2 G A 649 40.663 83.777 39.150 1.00 43.27 N
ATOM 23 N3 G A 649 39.486 82.532 37.620 1.00 44.64 N
ATOM 24 C4 G A 649 39.549 82.030 36.371 1.00 43.25 C
ATOM 25 P U A 650 34.099 83.974 34.556 1.00 43.70 P
ATOM 26 OP1 U A 650 32.637 84.197 34.504 1.00 40.56 O
ATOM 27 OP2 U A 650 34.882 83.890 33.298 1.00 41.69 O
ATOM 28 O5' U A 650 34.737 85.111 35.459 1.00 43.09 O
TER

ATOM 1 O3' A B 733 37.218 79.357 46.942 1.00 43.55 O
ATOM 2 P G B 734 38.278 80.001 47.967 1.00 43.36 P
ATOM 3 OP1 G B 734 39.167 78.920 48.455 1.00 42.10 O
ATOM 4 OP2 G B 734 37.537 80.836 48.949 1.00 41.59 O
ATOM 5 O5' G B 734 39.142 80.956 47.024 1.00 41.27 O
ATOM 6 C5' G B 734 40.115 80.402 46.117 1.00 40.09 C
ATOM 7 C4' G B 734 39.825 80.819 44.689 1.00 41.14 C
ATOM 8 O4' G B 734 38.485 80.413 44.292 1.00 40.37 O
ATOM 9 C3' G B 734 39.828 82.302 44.386 1.00 41.44 C
ATOM 10 O3' G B 734 41.152 82.793 44.275 1.00 42.73 O
ATOM 11 C2' G B 734 39.082 82.344 43.058 1.00 40.54 C
ATOM 12 O2' G B 734 39.859 81.906 41.961 1.00 41.77 O
ATOM 13 C1' G B 734 37.993 81.304 43.302 1.00 38.84 C
ATOM 14 N9 G B 734 36.764 81.913 43.790 1.00 37.07 N
ATOM 15 C8 G B 734 36.285 81.902 45.074 1.00 37.72 C
ATOM 16 N7 G B 734 35.155 82.538 45.204 1.00 36.68 N
ATOM 17 C5 G B 734 34.873 82.995 43.927 1.00 34.30 C
ATOM 18 C6 G B 734 33.783 83.739 43.455 1.00 32.54 C
ATOM 19 O6 G B 734 32.815 84.150 44.087 1.00 32.27 O
ATOM 20 N1 G B 734 33.886 83.994 42.095 1.00 32.43 N
ATOM 21 C2 G B 734 34.914 83.572 41.293 1.00 34.69 C
ATOM 22 N2 G B 734 34.841 83.912 39.996 1.00 35.43 N
ATOM 23 N3 G B 734 35.941 82.866 41.727 1.00 34.47 N
ATOM 24 C4 G B 734 35.856 82.618 43.045 1.00 35.01 C
ATOM 25 P C B 735 41.523 84.212 44.921 1.00 43.20 P
ATOM 26 OP1 C B 735 42.989 84.223 45.101 1.00 41.93 O
ATOM 27 OP2 C B 735 40.629 84.462 46.085 1.00 40.82 O
ATOM 28 O5' C B 735 41.119 85.263 43.801 1.00 41.81 O
TER

Atoms:
OP1: (35.403,76.752,32.019)
OP2: (37.157,78.619,32.223)
C3': (35.626,81.989,35.288)
C1': (37.339,80.814,36.380)
C5': (35.228,80.182,33.566)
O6: (42.669,83.209,35.075)
O4': (36.692,79.925,35.489)
C8: (39.073,80.944,34.519)
C2: (40.558,83.230,37.927)
C6: (41.686,82.946,35.769)
C5: (40.547,82.175,35.434)
C4: (39.549,82.030,36.371)
P: (36.077,77.803,32.828)
C4': (35.444,80.508,35.028)
C2': (36.398,81.998,36.593)
O2': (35.578,81.762,37.714)
N1: (41.605,83.438,37.064)
N2: (40.663,83.777,39.150)
N3: (39.486,82.532,37.620)
N7: (40.235,81.485,34.272)
N9: (38.599,81.237,35.776)
O5': (34.959,78.784,33.394)
O3': (34.370,82.633,35.388)
OP1: (39.167,78.920,48.455)
OP2: (37.537,80.836,48.949)
C3': (39.828,82.302,44.386)
C1': (37.993,81.304,43.302)
C5': (40.115,80.402,46.117)
O6: (32.815,84.150,44.087)
O4': (38.485,80.413,44.292)
C8: (36.285,81.902,45.074)
C2: (34.914,83.572,41.293)
C6: (33.783,83.739,43.455)
C5: (34.873,82.995,43.927)
C4: (35.856,82.618,43.045)
P: (38.278,80.001,47.967)
C4': (39.825,80.819,44.689)
C2': (39.082,82.344,43.058)
O2': (39.859,81.906,41.961)
N1: (33.886,83.994,42.095)
N2: (34.841,83.912,39.996)
N3: (35.941,82.866,41.727)
N7: (35.155,82.538,45.204)
N9: (36.764,81.913,43.790)
O5': (39.142,80.956,47.024)
O3': (41.152,82.793,44.275)
Image (generated by PyMOL):
PyMOL image
show in jmol