Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0565:0566
Extra
PDB:
ATOM 1 O3' C A 564 1.777 81.482 134.186 1.00 90.89 O
ATOM 2 P G A 565 2.405 82.109 135.521 1.00 89.60 P
ATOM 3 OP1 G A 565 3.099 81.009 136.247 1.00 89.18 O
ATOM 4 OP2 G A 565 1.358 82.913 136.219 1.00 87.91 O
ATOM 5 O5' G A 565 3.500 83.115 134.954 1.00 88.97 O
ATOM 6 C5' G A 565 4.554 82.651 134.085 1.00 86.33 C
ATOM 7 C4' G A 565 5.436 83.804 133.666 1.00 84.30 C
ATOM 8 O4' G A 565 4.718 84.678 132.750 1.00 83.23 O
ATOM 9 C3' G A 565 5.876 84.740 134.780 1.00 83.18 C
ATOM 10 O3' G A 565 6.941 84.215 135.574 1.00 81.50 O
ATOM 11 C2' G A 565 6.258 85.984 133.990 1.00 83.49 C
ATOM 12 O2' G A 565 7.504 85.842 133.330 1.00 83.88 O
ATOM 13 C1' G A 565 5.137 86.022 132.948 1.00 82.93 C
ATOM 14 N9 G A 565 3.988 86.811 133.397 1.00 82.58 N
ATOM 15 C8 G A 565 2.781 86.336 133.851 1.00 82.28 C
ATOM 16 N7 G A 565 1.960 87.283 134.216 1.00 82.21 N
ATOM 17 C5 G A 565 2.660 88.457 133.983 1.00 81.89 C
ATOM 18 C6 G A 565 2.284 89.806 134.200 1.00 81.50 C
ATOM 19 O6 G A 565 1.227 90.242 134.662 1.00 81.22 O
ATOM 20 N1 G A 565 3.294 90.688 133.826 1.00 81.80 N
ATOM 21 C2 G A 565 4.514 90.318 133.316 1.00 82.44 C
ATOM 22 N2 G A 565 5.360 91.312 133.019 1.00 81.31 N
ATOM 23 N3 G A 565 4.879 89.062 133.112 1.00 83.39 N
ATOM 24 C4 G A 565 3.910 88.189 133.467 1.00 82.65 C
ATOM 25 P C A 566 6.823 84.238 137.184 1.00 78.85 P
ATOM 26 OP1 C A 566 8.135 83.862 137.759 1.00 79.73 O
ATOM 27 OP2 C A 566 5.617 83.463 137.560 1.00 79.91 O
ATOM 28 O5' C A 566 6.554 85.767 137.548 1.00 77.95 O
TER
ATOM 1 O3' G B 565 6.941 84.215 135.574 1.00 81.50 O
ATOM 2 P C B 566 6.823 84.238 137.184 1.00 78.85 P
ATOM 3 OP1 C B 566 8.135 83.862 137.759 1.00 79.73 O
ATOM 4 OP2 C B 566 5.617 83.463 137.560 1.00 79.91 O
ATOM 5 O5' C B 566 6.554 85.767 137.548 1.00 77.95 O
ATOM 6 C5' C B 566 6.096 86.140 138.866 1.00 76.96 C
ATOM 7 C4' C B 566 6.901 87.305 139.408 1.00 75.93 C
ATOM 8 O4' C B 566 8.305 86.943 139.482 1.00 75.42 O
ATOM 9 C3' C B 566 6.905 88.563 138.555 1.00 75.49 C
ATOM 10 O3' C B 566 5.733 89.332 138.798 1.00 73.56 O
ATOM 11 C2' C B 566 8.163 89.287 139.031 1.00 75.01 C
ATOM 12 O2' C B 566 7.947 90.042 140.202 1.00 75.58 O
ATOM 13 C1' C B 566 9.094 88.115 139.361 1.00 74.58 C
ATOM 14 N1 C B 566 10.191 87.868 138.408 1.00 73.53 N
ATOM 15 C2 C B 566 11.350 88.655 138.495 1.00 73.87 C
ATOM 16 O2 C B 566 11.413 89.547 139.353 1.00 74.47 O
ATOM 17 N3 C B 566 12.373 88.421 137.645 1.00 73.85 N
ATOM 18 C4 C B 566 12.275 87.449 136.736 1.00 74.16 C
ATOM 19 N4 C B 566 13.318 87.244 135.932 1.00 74.15 N
ATOM 20 C5 C B 566 11.105 86.641 136.616 1.00 74.01 C
ATOM 21 C6 C B 566 10.096 86.885 137.461 1.00 73.55 C
ATOM 22 P G B 567 4.837 89.820 137.565 1.00 72.38 P
ATOM 23 OP1 G B 567 3.616 90.461 138.111 1.00 71.78 O
ATOM 24 OP2 G B 567 4.715 88.675 136.626 1.00 72.34 O
ATOM 25 O5' G B 567 5.724 90.946 136.869 1.00 73.36 O
TER
ATOM 2 P G A 565 2.405 82.109 135.521 1.00 89.60 P
ATOM 3 OP1 G A 565 3.099 81.009 136.247 1.00 89.18 O
ATOM 4 OP2 G A 565 1.358 82.913 136.219 1.00 87.91 O
ATOM 5 O5' G A 565 3.500 83.115 134.954 1.00 88.97 O
ATOM 6 C5' G A 565 4.554 82.651 134.085 1.00 86.33 C
ATOM 7 C4' G A 565 5.436 83.804 133.666 1.00 84.30 C
ATOM 8 O4' G A 565 4.718 84.678 132.750 1.00 83.23 O
ATOM 9 C3' G A 565 5.876 84.740 134.780 1.00 83.18 C
ATOM 10 O3' G A 565 6.941 84.215 135.574 1.00 81.50 O
ATOM 11 C2' G A 565 6.258 85.984 133.990 1.00 83.49 C
ATOM 12 O2' G A 565 7.504 85.842 133.330 1.00 83.88 O
ATOM 13 C1' G A 565 5.137 86.022 132.948 1.00 82.93 C
ATOM 14 N9 G A 565 3.988 86.811 133.397 1.00 82.58 N
ATOM 15 C8 G A 565 2.781 86.336 133.851 1.00 82.28 C
ATOM 16 N7 G A 565 1.960 87.283 134.216 1.00 82.21 N
ATOM 17 C5 G A 565 2.660 88.457 133.983 1.00 81.89 C
ATOM 18 C6 G A 565 2.284 89.806 134.200 1.00 81.50 C
ATOM 19 O6 G A 565 1.227 90.242 134.662 1.00 81.22 O
ATOM 20 N1 G A 565 3.294 90.688 133.826 1.00 81.80 N
ATOM 21 C2 G A 565 4.514 90.318 133.316 1.00 82.44 C
ATOM 22 N2 G A 565 5.360 91.312 133.019 1.00 81.31 N
ATOM 23 N3 G A 565 4.879 89.062 133.112 1.00 83.39 N
ATOM 24 C4 G A 565 3.910 88.189 133.467 1.00 82.65 C
ATOM 25 P C A 566 6.823 84.238 137.184 1.00 78.85 P
ATOM 26 OP1 C A 566 8.135 83.862 137.759 1.00 79.73 O
ATOM 27 OP2 C A 566 5.617 83.463 137.560 1.00 79.91 O
ATOM 28 O5' C A 566 6.554 85.767 137.548 1.00 77.95 O
TER
ATOM 1 O3' G B 565 6.941 84.215 135.574 1.00 81.50 O
ATOM 2 P C B 566 6.823 84.238 137.184 1.00 78.85 P
ATOM 3 OP1 C B 566 8.135 83.862 137.759 1.00 79.73 O
ATOM 4 OP2 C B 566 5.617 83.463 137.560 1.00 79.91 O
ATOM 5 O5' C B 566 6.554 85.767 137.548 1.00 77.95 O
ATOM 6 C5' C B 566 6.096 86.140 138.866 1.00 76.96 C
ATOM 7 C4' C B 566 6.901 87.305 139.408 1.00 75.93 C
ATOM 8 O4' C B 566 8.305 86.943 139.482 1.00 75.42 O
ATOM 9 C3' C B 566 6.905 88.563 138.555 1.00 75.49 C
ATOM 10 O3' C B 566 5.733 89.332 138.798 1.00 73.56 O
ATOM 11 C2' C B 566 8.163 89.287 139.031 1.00 75.01 C
ATOM 12 O2' C B 566 7.947 90.042 140.202 1.00 75.58 O
ATOM 13 C1' C B 566 9.094 88.115 139.361 1.00 74.58 C
ATOM 14 N1 C B 566 10.191 87.868 138.408 1.00 73.53 N
ATOM 15 C2 C B 566 11.350 88.655 138.495 1.00 73.87 C
ATOM 16 O2 C B 566 11.413 89.547 139.353 1.00 74.47 O
ATOM 17 N3 C B 566 12.373 88.421 137.645 1.00 73.85 N
ATOM 18 C4 C B 566 12.275 87.449 136.736 1.00 74.16 C
ATOM 19 N4 C B 566 13.318 87.244 135.932 1.00 74.15 N
ATOM 20 C5 C B 566 11.105 86.641 136.616 1.00 74.01 C
ATOM 21 C6 C B 566 10.096 86.885 137.461 1.00 73.55 C
ATOM 22 P G B 567 4.837 89.820 137.565 1.00 72.38 P
ATOM 23 OP1 G B 567 3.616 90.461 138.111 1.00 71.78 O
ATOM 24 OP2 G B 567 4.715 88.675 136.626 1.00 72.34 O
ATOM 25 O5' G B 567 5.724 90.946 136.869 1.00 73.36 O
TER
Atoms:
OP1: (3.099,81.009,136.247)
OP2: (1.358,82.913,136.219)
C3': (5.876,84.740,134.780)
C1': (5.137,86.022,132.948)
C5': (4.554,82.651,134.085)
O6: (1.227,90.242,134.662)
O4': (4.718,84.678,132.750)
C8: (2.781,86.336,133.851)
C2: (4.514,90.318,133.316)
C6: (2.284,89.806,134.200)
C5: (2.660,88.457,133.983)
C4: (3.910,88.189,133.467)
P: (2.405,82.109,135.521)
C4': (5.436,83.804,133.666)
C2': (6.258,85.984,133.990)
O2': (7.504,85.842,133.330)
N1: (3.294,90.688,133.826)
N2: (5.360,91.312,133.019)
N3: (4.879,89.062,133.112)
N7: (1.960,87.283,134.216)
N9: (3.988,86.811,133.397)
O5': (3.500,83.115,134.954)
O3': (6.941,84.215,135.574)
OP2: (1.358,82.913,136.219)
C3': (5.876,84.740,134.780)
C1': (5.137,86.022,132.948)
C5': (4.554,82.651,134.085)
O6: (1.227,90.242,134.662)
O4': (4.718,84.678,132.750)
C8: (2.781,86.336,133.851)
C2: (4.514,90.318,133.316)
C6: (2.284,89.806,134.200)
C5: (2.660,88.457,133.983)
C4: (3.910,88.189,133.467)
P: (2.405,82.109,135.521)
C4': (5.436,83.804,133.666)
C2': (6.258,85.984,133.990)
O2': (7.504,85.842,133.330)
N1: (3.294,90.688,133.826)
N2: (5.360,91.312,133.019)
N3: (4.879,89.062,133.112)
N7: (1.960,87.283,134.216)
N9: (3.988,86.811,133.397)
O5': (3.500,83.115,134.954)
O3': (6.941,84.215,135.574)
C2: (11.350,88.655,138.495)
OP1: (8.135,83.862,137.759)
OP2: (5.617,83.463,137.560)
C4: (12.275,87.449,136.736)
O5': (6.554,85.767,137.548)
C3': (6.905,88.563,138.555)
C1': (9.094,88.115,139.361)
O4': (8.305,86.943,139.482)
C5': (6.096,86.140,138.866)
P: (6.823,84.238,137.184)
O2: (11.413,89.547,139.353)
C4': (6.901,87.305,139.408)
C2': (8.163,89.287,139.031)
O2': (7.947,90.042,140.202)
N1: (10.191,87.868,138.408)
N3: (12.373,88.421,137.645)
N4: (13.318,87.244,135.932)
C6: (10.096,86.885,137.461)
C5: (11.105,86.641,136.616)
O3': (5.733,89.332,138.798)
OP1: (8.135,83.862,137.759)
OP2: (5.617,83.463,137.560)
C4: (12.275,87.449,136.736)
O5': (6.554,85.767,137.548)
C3': (6.905,88.563,138.555)
C1': (9.094,88.115,139.361)
O4': (8.305,86.943,139.482)
C5': (6.096,86.140,138.866)
P: (6.823,84.238,137.184)
O2: (11.413,89.547,139.353)
C4': (6.901,87.305,139.408)
C2': (8.163,89.287,139.031)
O2': (7.947,90.042,140.202)
N1: (10.191,87.868,138.408)
N3: (12.373,88.421,137.645)
N4: (13.318,87.244,135.932)
C6: (10.096,86.885,137.461)
C5: (11.105,86.641,136.616)
O3': (5.733,89.332,138.798)
Image (generated by PyMOL):