Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A498:A546
Extra
PDB:
ATOM 1 O3' A A 497 -102.206 19.222 -72.456 1.00 30.20 O
ATOM 2 P G A 498 -102.974 17.919 -71.881 1.00 24.28 P
ATOM 3 OP1 G A 498 -103.135 16.963 -73.001 1.00 24.28 O
ATOM 4 OP2 G A 498 -104.188 18.396 -71.176 1.00 24.28 O
ATOM 5 O5' G A 498 -101.938 17.343 -70.825 1.00 24.28 O
ATOM 6 C5' G A 498 -100.847 16.546 -71.245 1.00 24.28 C
ATOM 7 C4' G A 498 -99.653 16.750 -70.364 1.00 24.28 C
ATOM 8 O4' G A 498 -98.916 17.912 -70.805 1.00 24.28 O
ATOM 9 C3' G A 498 -99.951 17.032 -68.909 1.00 24.28 C
ATOM 10 O3' G A 498 -100.239 15.857 -68.173 1.00 24.28 O
ATOM 11 C2' G A 498 -98.693 17.761 -68.463 1.00 24.28 C
ATOM 12 O2' G A 498 -97.624 16.858 -68.282 1.00 24.28 O
ATOM 13 C1' G A 498 -98.396 18.599 -69.695 1.00 24.28 C
ATOM 14 N9 G A 498 -99.044 19.915 -69.630 1.00 24.63 N
ATOM 15 C8 G A 498 -100.311 20.249 -70.069 1.00 24.63 C
ATOM 16 N7 G A 498 -100.584 21.508 -69.866 1.00 24.63 N
ATOM 17 C5 G A 498 -99.424 22.026 -69.265 1.00 24.63 C
ATOM 18 C6 G A 498 -99.099 23.334 -68.807 1.00 24.63 C
ATOM 19 O6 G A 498 -99.784 24.358 -68.835 1.00 24.63 O
ATOM 20 N1 G A 498 -97.830 23.416 -68.259 1.00 24.63 N
ATOM 21 C2 G A 498 -96.953 22.367 -68.164 1.00 24.63 C
ATOM 22 N2 G A 498 -95.766 22.660 -67.606 1.00 24.63 N
ATOM 23 N3 G A 498 -97.226 21.136 -68.586 1.00 24.63 N
ATOM 24 C4 G A 498 -98.465 21.050 -69.119 1.00 24.63 C
ATOM 25 P C A 499 -100.332 15.899 -66.568 1.00 15.47 P
ATOM 26 OP1 C A 499 -100.710 14.545 -66.120 1.00 15.47 O
ATOM 27 OP2 C A 499 -101.198 17.049 -66.196 1.00 15.47 O
ATOM 28 O5' C A 499 -98.835 16.210 -66.149 1.00 15.47 O
TER
ATOM 1 O3' A B 545 -89.369 19.802 -73.026 1.00 23.18 O
ATOM 2 P G B 546 -87.838 20.212 -72.824 1.00 16.20 P
ATOM 3 OP1 G B 546 -87.357 20.728 -74.128 1.00 16.20 O
ATOM 4 OP2 G B 546 -87.144 19.054 -72.200 1.00 16.20 O
ATOM 5 O5' G B 546 -87.935 21.383 -71.769 1.00 16.20 O
ATOM 6 C5' G B 546 -88.228 21.106 -70.409 1.00 16.20 C
ATOM 7 C4' G B 546 -89.703 21.210 -70.119 1.00 16.20 C
ATOM 8 O4' G B 546 -90.376 20.020 -70.608 1.00 16.20 O
ATOM 9 C3' G B 546 -90.072 21.276 -68.647 1.00 16.20 C
ATOM 10 O3' G B 546 -90.001 22.586 -68.115 1.00 16.20 O
ATOM 11 C2' G B 546 -91.468 20.662 -68.610 1.00 16.20 C
ATOM 12 O2' G B 546 -92.460 21.599 -69.001 1.00 16.20 O
ATOM 13 C1' G B 546 -91.360 19.596 -69.689 1.00 16.20 C
ATOM 14 N9 G B 546 -90.951 18.285 -69.142 1.00 16.17 N
ATOM 15 C8 G B 546 -89.728 17.707 -69.365 1.00 16.17 C
ATOM 16 N7 G B 546 -89.607 16.547 -68.787 1.00 16.17 N
ATOM 17 C5 G B 546 -90.817 16.331 -68.140 1.00 16.17 C
ATOM 18 C6 G B 546 -91.259 15.229 -67.347 1.00 16.17 C
ATOM 19 O6 G B 546 -90.665 14.186 -67.038 1.00 16.17 O
ATOM 20 N1 G B 546 -92.554 15.419 -66.894 1.00 16.17 N
ATOM 21 C2 G B 546 -93.325 16.516 -67.157 1.00 16.17 C
ATOM 22 N2 G B 546 -94.546 16.503 -66.604 1.00 16.17 N
ATOM 23 N3 G B 546 -92.924 17.542 -67.884 1.00 16.17 N
ATOM 24 C4 G B 546 -91.666 17.397 -68.351 1.00 16.17 C
ATOM 25 P C B 547 -89.745 22.808 -66.546 1.00 18.16 P
ATOM 26 OP1 C B 547 -89.843 24.245 -66.287 1.00 18.16 O
ATOM 27 OP2 C B 547 -88.483 22.101 -66.203 1.00 18.16 O
ATOM 28 O5' C B 547 -90.971 22.076 -65.890 1.00 18.16 O
TER
ATOM 2 P G A 498 -102.974 17.919 -71.881 1.00 24.28 P
ATOM 3 OP1 G A 498 -103.135 16.963 -73.001 1.00 24.28 O
ATOM 4 OP2 G A 498 -104.188 18.396 -71.176 1.00 24.28 O
ATOM 5 O5' G A 498 -101.938 17.343 -70.825 1.00 24.28 O
ATOM 6 C5' G A 498 -100.847 16.546 -71.245 1.00 24.28 C
ATOM 7 C4' G A 498 -99.653 16.750 -70.364 1.00 24.28 C
ATOM 8 O4' G A 498 -98.916 17.912 -70.805 1.00 24.28 O
ATOM 9 C3' G A 498 -99.951 17.032 -68.909 1.00 24.28 C
ATOM 10 O3' G A 498 -100.239 15.857 -68.173 1.00 24.28 O
ATOM 11 C2' G A 498 -98.693 17.761 -68.463 1.00 24.28 C
ATOM 12 O2' G A 498 -97.624 16.858 -68.282 1.00 24.28 O
ATOM 13 C1' G A 498 -98.396 18.599 -69.695 1.00 24.28 C
ATOM 14 N9 G A 498 -99.044 19.915 -69.630 1.00 24.63 N
ATOM 15 C8 G A 498 -100.311 20.249 -70.069 1.00 24.63 C
ATOM 16 N7 G A 498 -100.584 21.508 -69.866 1.00 24.63 N
ATOM 17 C5 G A 498 -99.424 22.026 -69.265 1.00 24.63 C
ATOM 18 C6 G A 498 -99.099 23.334 -68.807 1.00 24.63 C
ATOM 19 O6 G A 498 -99.784 24.358 -68.835 1.00 24.63 O
ATOM 20 N1 G A 498 -97.830 23.416 -68.259 1.00 24.63 N
ATOM 21 C2 G A 498 -96.953 22.367 -68.164 1.00 24.63 C
ATOM 22 N2 G A 498 -95.766 22.660 -67.606 1.00 24.63 N
ATOM 23 N3 G A 498 -97.226 21.136 -68.586 1.00 24.63 N
ATOM 24 C4 G A 498 -98.465 21.050 -69.119 1.00 24.63 C
ATOM 25 P C A 499 -100.332 15.899 -66.568 1.00 15.47 P
ATOM 26 OP1 C A 499 -100.710 14.545 -66.120 1.00 15.47 O
ATOM 27 OP2 C A 499 -101.198 17.049 -66.196 1.00 15.47 O
ATOM 28 O5' C A 499 -98.835 16.210 -66.149 1.00 15.47 O
TER
ATOM 1 O3' A B 545 -89.369 19.802 -73.026 1.00 23.18 O
ATOM 2 P G B 546 -87.838 20.212 -72.824 1.00 16.20 P
ATOM 3 OP1 G B 546 -87.357 20.728 -74.128 1.00 16.20 O
ATOM 4 OP2 G B 546 -87.144 19.054 -72.200 1.00 16.20 O
ATOM 5 O5' G B 546 -87.935 21.383 -71.769 1.00 16.20 O
ATOM 6 C5' G B 546 -88.228 21.106 -70.409 1.00 16.20 C
ATOM 7 C4' G B 546 -89.703 21.210 -70.119 1.00 16.20 C
ATOM 8 O4' G B 546 -90.376 20.020 -70.608 1.00 16.20 O
ATOM 9 C3' G B 546 -90.072 21.276 -68.647 1.00 16.20 C
ATOM 10 O3' G B 546 -90.001 22.586 -68.115 1.00 16.20 O
ATOM 11 C2' G B 546 -91.468 20.662 -68.610 1.00 16.20 C
ATOM 12 O2' G B 546 -92.460 21.599 -69.001 1.00 16.20 O
ATOM 13 C1' G B 546 -91.360 19.596 -69.689 1.00 16.20 C
ATOM 14 N9 G B 546 -90.951 18.285 -69.142 1.00 16.17 N
ATOM 15 C8 G B 546 -89.728 17.707 -69.365 1.00 16.17 C
ATOM 16 N7 G B 546 -89.607 16.547 -68.787 1.00 16.17 N
ATOM 17 C5 G B 546 -90.817 16.331 -68.140 1.00 16.17 C
ATOM 18 C6 G B 546 -91.259 15.229 -67.347 1.00 16.17 C
ATOM 19 O6 G B 546 -90.665 14.186 -67.038 1.00 16.17 O
ATOM 20 N1 G B 546 -92.554 15.419 -66.894 1.00 16.17 N
ATOM 21 C2 G B 546 -93.325 16.516 -67.157 1.00 16.17 C
ATOM 22 N2 G B 546 -94.546 16.503 -66.604 1.00 16.17 N
ATOM 23 N3 G B 546 -92.924 17.542 -67.884 1.00 16.17 N
ATOM 24 C4 G B 546 -91.666 17.397 -68.351 1.00 16.17 C
ATOM 25 P C B 547 -89.745 22.808 -66.546 1.00 18.16 P
ATOM 26 OP1 C B 547 -89.843 24.245 -66.287 1.00 18.16 O
ATOM 27 OP2 C B 547 -88.483 22.101 -66.203 1.00 18.16 O
ATOM 28 O5' C B 547 -90.971 22.076 -65.890 1.00 18.16 O
TER
Atoms:
OP1: (-103.135,16.963,-73.001)
OP2: (-104.188,18.396,-71.176)
C3': (-99.951,17.032,-68.909)
C1': (-98.396,18.599,-69.695)
C5': (-100.847,16.546,-71.245)
O6: (-99.784,24.358,-68.835)
O4': (-98.916,17.912,-70.805)
C8: (-100.311,20.249,-70.069)
C2: (-96.953,22.367,-68.164)
C6: (-99.099,23.334,-68.807)
C5: (-99.424,22.026,-69.265)
C4: (-98.465,21.050,-69.119)
P: (-102.974,17.919,-71.881)
C4': (-99.653,16.750,-70.364)
C2': (-98.693,17.761,-68.463)
O2': (-97.624,16.858,-68.282)
N1: (-97.830,23.416,-68.259)
N2: (-95.766,22.660,-67.606)
N3: (-97.226,21.136,-68.586)
N7: (-100.584,21.508,-69.866)
N9: (-99.044,19.915,-69.630)
O5': (-101.938,17.343,-70.825)
O3': (-100.239,15.857,-68.173)
OP2: (-104.188,18.396,-71.176)
C3': (-99.951,17.032,-68.909)
C1': (-98.396,18.599,-69.695)
C5': (-100.847,16.546,-71.245)
O6: (-99.784,24.358,-68.835)
O4': (-98.916,17.912,-70.805)
C8: (-100.311,20.249,-70.069)
C2: (-96.953,22.367,-68.164)
C6: (-99.099,23.334,-68.807)
C5: (-99.424,22.026,-69.265)
C4: (-98.465,21.050,-69.119)
P: (-102.974,17.919,-71.881)
C4': (-99.653,16.750,-70.364)
C2': (-98.693,17.761,-68.463)
O2': (-97.624,16.858,-68.282)
N1: (-97.830,23.416,-68.259)
N2: (-95.766,22.660,-67.606)
N3: (-97.226,21.136,-68.586)
N7: (-100.584,21.508,-69.866)
N9: (-99.044,19.915,-69.630)
O5': (-101.938,17.343,-70.825)
O3': (-100.239,15.857,-68.173)
OP1: (-87.357,20.728,-74.128)
OP2: (-87.144,19.054,-72.200)
C3': (-90.072,21.276,-68.647)
C1': (-91.360,19.596,-69.689)
C5': (-88.228,21.106,-70.409)
O6: (-90.665,14.186,-67.038)
O4': (-90.376,20.020,-70.608)
C8: (-89.728,17.707,-69.365)
C2: (-93.325,16.516,-67.157)
C6: (-91.259,15.229,-67.347)
C5: (-90.817,16.331,-68.140)
C4: (-91.666,17.397,-68.351)
P: (-87.838,20.212,-72.824)
C4': (-89.703,21.210,-70.119)
C2': (-91.468,20.662,-68.610)
O2': (-92.460,21.599,-69.001)
N1: (-92.554,15.419,-66.894)
N2: (-94.546,16.503,-66.604)
N3: (-92.924,17.542,-67.884)
N7: (-89.607,16.547,-68.787)
N9: (-90.951,18.285,-69.142)
O5': (-87.935,21.383,-71.769)
O3': (-90.001,22.586,-68.115)
OP2: (-87.144,19.054,-72.200)
C3': (-90.072,21.276,-68.647)
C1': (-91.360,19.596,-69.689)
C5': (-88.228,21.106,-70.409)
O6: (-90.665,14.186,-67.038)
O4': (-90.376,20.020,-70.608)
C8: (-89.728,17.707,-69.365)
C2: (-93.325,16.516,-67.157)
C6: (-91.259,15.229,-67.347)
C5: (-90.817,16.331,-68.140)
C4: (-91.666,17.397,-68.351)
P: (-87.838,20.212,-72.824)
C4': (-89.703,21.210,-70.119)
C2': (-91.468,20.662,-68.610)
O2': (-92.460,21.599,-69.001)
N1: (-92.554,15.419,-66.894)
N2: (-94.546,16.503,-66.604)
N3: (-92.924,17.542,-67.884)
N7: (-89.607,16.547,-68.787)
N9: (-90.951,18.285,-69.142)
O5': (-87.935,21.383,-71.769)
O3': (-90.001,22.586,-68.115)
Image (generated by PyMOL):