Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A521:A552
Extra
PDB:
ATOM 1 O3' U A 520 -51.063-113.917 -0.819 1.00 0.01 O
ATOM 2 P A A 521 -51.876-113.781 -2.162 1.00 0.01 P
ATOM 3 OP1 A A 521 -51.533-114.948 -2.987 1.00 0.01 O
ATOM 4 OP2 A A 521 -51.606-112.458 -2.689 1.00 0.01 O
ATOM 5 O5' A A 521 -53.382-113.874 -1.669 1.00 0.01 O
ATOM 6 C5' A A 521 -53.819-114.969 -0.884 1.00 0.01 C
ATOM 7 C4' A A 521 -55.256-114.818 -0.461 1.00 0.01 C
ATOM 8 O4' A A 521 -55.343-113.890 0.642 1.00 0.01 O
ATOM 9 C3' A A 521 -56.196-114.244 -1.493 1.00 0.01 C
ATOM 10 O3' A A 521 -56.652-115.203 -2.409 1.00 0.01 O
ATOM 11 C2' A A 521 -57.299-113.661 -0.634 1.00 0.01 C
ATOM 12 O2' A A 521 -58.143-114.669 -0.141 1.00 0.01 O
ATOM 13 C1' A A 521 -56.506-113.110 0.526 1.00 0.01 C
ATOM 14 N9 A A 521 -56.100-111.730 0.284 1.00 0.01 N
ATOM 15 C8 A A 521 -54.945-111.433 -0.308 1.00 0.01 C
ATOM 16 N7 A A 521 -54.785-110.167 -0.413 1.00 0.01 N
ATOM 17 C5 A A 521 -55.903-109.587 0.134 1.00 0.01 C
ATOM 18 C6 A A 521 -56.271-108.245 0.294 1.00 0.01 C
ATOM 19 N6 A A 521 -55.506-107.218 -0.094 1.00 0.01 N
ATOM 20 N1 A A 521 -57.451-108.002 0.870 1.00 0.01 N
ATOM 21 C2 A A 521 -58.174-109.043 1.267 1.00 0.01 C
ATOM 22 N3 A A 521 -57.923-110.342 1.174 1.00 0.01 N
ATOM 23 C4 A A 521 -56.744-110.553 0.577 1.00 0.01 C
ATOM 24 P C A 522 -57.111-114.765 -3.878 1.00 0.01 P
ATOM 25 OP1 C A 522 -57.490-115.986 -4.584 1.00 0.01 O
ATOM 26 OP2 C A 522 -56.049-113.919 -4.447 1.00 0.01 O
ATOM 27 O5' C A 522 -58.388-113.876 -3.603 1.00 0.01 O
TER
ATOM 1 O3' U B 551 -65.775-113.686 9.496 1.00 4.35 O
ATOM 2 P G B 552 -66.312-112.501 8.586 1.00 0.01 P
ATOM 3 OP1 G B 552 -66.364-111.297 9.463 1.00 0.01 O
ATOM 4 OP2 G B 552 -67.569-112.984 7.939 1.00 0.01 O
ATOM 5 O5' G B 552 -65.168-112.351 7.486 1.00 0.01 O
ATOM 6 C5' G B 552 -63.875-111.915 7.846 1.00 0.01 C
ATOM 7 C4' G B 552 -62.973-111.811 6.651 1.00 0.01 C
ATOM 8 O4' G B 552 -62.714-113.129 6.123 1.00 0.01 O
ATOM 9 C3' G B 552 -63.521-111.068 5.459 1.00 0.01 C
ATOM 10 O3' G B 552 -63.477-109.673 5.598 1.00 0.01 O
ATOM 11 C2' G B 552 -62.649-111.592 4.345 1.00 0.01 C
ATOM 12 O2' G B 552 -61.357-111.023 4.416 1.00 0.01 O
ATOM 13 C1' G B 552 -62.544-113.058 4.730 1.00 0.01 C
ATOM 14 N9 G B 552 -63.592-113.846 4.098 1.00 0.01 N
ATOM 15 C8 G B 552 -64.771-114.201 4.650 1.00 0.01 C
ATOM 16 N7 G B 552 -65.516-114.864 3.830 1.00 0.01 N
ATOM 17 C5 G B 552 -64.781-114.936 2.665 1.00 0.01 C
ATOM 18 C6 G B 552 -65.081-115.531 1.413 1.00 0.01 C
ATOM 19 O6 G B 552 -66.088-116.163 1.050 1.00 0.01 O
ATOM 20 N1 G B 552 -64.035-115.351 0.525 1.00 0.01 N
ATOM 21 C2 G B 552 -62.875-114.684 0.804 1.00 0.01 C
ATOM 22 N2 G B 552 -61.987-114.621 -0.187 1.00 0.01 N
ATOM 23 N3 G B 552 -62.601-114.122 1.961 1.00 0.01 N
ATOM 24 C4 G B 552 -63.592-114.298 2.833 1.00 0.01 C
ATOM 25 P U B 553 -64.602-108.787 4.912 1.00 0.01 P
ATOM 26 OP1 U B 553 -64.414-107.412 5.350 1.00 0.01 O
ATOM 27 OP2 U B 553 -65.885-109.443 5.168 1.00 0.01 O
ATOM 28 O5' U B 553 -64.248-108.911 3.407 1.00 0.01 O
TER
ATOM 2 P A A 521 -51.876-113.781 -2.162 1.00 0.01 P
ATOM 3 OP1 A A 521 -51.533-114.948 -2.987 1.00 0.01 O
ATOM 4 OP2 A A 521 -51.606-112.458 -2.689 1.00 0.01 O
ATOM 5 O5' A A 521 -53.382-113.874 -1.669 1.00 0.01 O
ATOM 6 C5' A A 521 -53.819-114.969 -0.884 1.00 0.01 C
ATOM 7 C4' A A 521 -55.256-114.818 -0.461 1.00 0.01 C
ATOM 8 O4' A A 521 -55.343-113.890 0.642 1.00 0.01 O
ATOM 9 C3' A A 521 -56.196-114.244 -1.493 1.00 0.01 C
ATOM 10 O3' A A 521 -56.652-115.203 -2.409 1.00 0.01 O
ATOM 11 C2' A A 521 -57.299-113.661 -0.634 1.00 0.01 C
ATOM 12 O2' A A 521 -58.143-114.669 -0.141 1.00 0.01 O
ATOM 13 C1' A A 521 -56.506-113.110 0.526 1.00 0.01 C
ATOM 14 N9 A A 521 -56.100-111.730 0.284 1.00 0.01 N
ATOM 15 C8 A A 521 -54.945-111.433 -0.308 1.00 0.01 C
ATOM 16 N7 A A 521 -54.785-110.167 -0.413 1.00 0.01 N
ATOM 17 C5 A A 521 -55.903-109.587 0.134 1.00 0.01 C
ATOM 18 C6 A A 521 -56.271-108.245 0.294 1.00 0.01 C
ATOM 19 N6 A A 521 -55.506-107.218 -0.094 1.00 0.01 N
ATOM 20 N1 A A 521 -57.451-108.002 0.870 1.00 0.01 N
ATOM 21 C2 A A 521 -58.174-109.043 1.267 1.00 0.01 C
ATOM 22 N3 A A 521 -57.923-110.342 1.174 1.00 0.01 N
ATOM 23 C4 A A 521 -56.744-110.553 0.577 1.00 0.01 C
ATOM 24 P C A 522 -57.111-114.765 -3.878 1.00 0.01 P
ATOM 25 OP1 C A 522 -57.490-115.986 -4.584 1.00 0.01 O
ATOM 26 OP2 C A 522 -56.049-113.919 -4.447 1.00 0.01 O
ATOM 27 O5' C A 522 -58.388-113.876 -3.603 1.00 0.01 O
TER
ATOM 1 O3' U B 551 -65.775-113.686 9.496 1.00 4.35 O
ATOM 2 P G B 552 -66.312-112.501 8.586 1.00 0.01 P
ATOM 3 OP1 G B 552 -66.364-111.297 9.463 1.00 0.01 O
ATOM 4 OP2 G B 552 -67.569-112.984 7.939 1.00 0.01 O
ATOM 5 O5' G B 552 -65.168-112.351 7.486 1.00 0.01 O
ATOM 6 C5' G B 552 -63.875-111.915 7.846 1.00 0.01 C
ATOM 7 C4' G B 552 -62.973-111.811 6.651 1.00 0.01 C
ATOM 8 O4' G B 552 -62.714-113.129 6.123 1.00 0.01 O
ATOM 9 C3' G B 552 -63.521-111.068 5.459 1.00 0.01 C
ATOM 10 O3' G B 552 -63.477-109.673 5.598 1.00 0.01 O
ATOM 11 C2' G B 552 -62.649-111.592 4.345 1.00 0.01 C
ATOM 12 O2' G B 552 -61.357-111.023 4.416 1.00 0.01 O
ATOM 13 C1' G B 552 -62.544-113.058 4.730 1.00 0.01 C
ATOM 14 N9 G B 552 -63.592-113.846 4.098 1.00 0.01 N
ATOM 15 C8 G B 552 -64.771-114.201 4.650 1.00 0.01 C
ATOM 16 N7 G B 552 -65.516-114.864 3.830 1.00 0.01 N
ATOM 17 C5 G B 552 -64.781-114.936 2.665 1.00 0.01 C
ATOM 18 C6 G B 552 -65.081-115.531 1.413 1.00 0.01 C
ATOM 19 O6 G B 552 -66.088-116.163 1.050 1.00 0.01 O
ATOM 20 N1 G B 552 -64.035-115.351 0.525 1.00 0.01 N
ATOM 21 C2 G B 552 -62.875-114.684 0.804 1.00 0.01 C
ATOM 22 N2 G B 552 -61.987-114.621 -0.187 1.00 0.01 N
ATOM 23 N3 G B 552 -62.601-114.122 1.961 1.00 0.01 N
ATOM 24 C4 G B 552 -63.592-114.298 2.833 1.00 0.01 C
ATOM 25 P U B 553 -64.602-108.787 4.912 1.00 0.01 P
ATOM 26 OP1 U B 553 -64.414-107.412 5.350 1.00 0.01 O
ATOM 27 OP2 U B 553 -65.885-109.443 5.168 1.00 0.01 O
ATOM 28 O5' U B 553 -64.248-108.911 3.407 1.00 0.01 O
TER
Atoms:
OP1: (-51.533,-114.948,-2.987)
OP2: (-51.606,-112.458,-2.689)
C3': (-56.196,-114.244,-1.493)
C1': (-56.506,-113.110,0.526)
C5': (-53.819,-114.969,-0.884)
O4': (-55.343,-113.890,0.642)
C8: (-54.945,-111.433,-0.308)
O2': (-58.143,-114.669,-0.141)
C6: (-56.271,-108.245,0.294)
C5: (-55.903,-109.587,0.134)
C4: (-56.744,-110.553,0.577)
P: (-51.876,-113.781,-2.162)
C4': (-55.256,-114.818,-0.461)
C2': (-57.299,-113.661,-0.634)
C2: (-58.174,-109.043,1.267)
N1: (-57.451,-108.002,0.870)
N3: (-57.923,-110.342,1.174)
N6: (-55.506,-107.218,-0.094)
N7: (-54.785,-110.167,-0.413)
N9: (-56.100,-111.730,0.284)
O5': (-53.382,-113.874,-1.669)
O3': (-56.652,-115.203,-2.409)
OP2: (-51.606,-112.458,-2.689)
C3': (-56.196,-114.244,-1.493)
C1': (-56.506,-113.110,0.526)
C5': (-53.819,-114.969,-0.884)
O4': (-55.343,-113.890,0.642)
C8: (-54.945,-111.433,-0.308)
O2': (-58.143,-114.669,-0.141)
C6: (-56.271,-108.245,0.294)
C5: (-55.903,-109.587,0.134)
C4: (-56.744,-110.553,0.577)
P: (-51.876,-113.781,-2.162)
C4': (-55.256,-114.818,-0.461)
C2': (-57.299,-113.661,-0.634)
C2: (-58.174,-109.043,1.267)
N1: (-57.451,-108.002,0.870)
N3: (-57.923,-110.342,1.174)
N6: (-55.506,-107.218,-0.094)
N7: (-54.785,-110.167,-0.413)
N9: (-56.100,-111.730,0.284)
O5': (-53.382,-113.874,-1.669)
O3': (-56.652,-115.203,-2.409)
OP1: (-66.364,-111.297,9.463)
OP2: (-67.569,-112.984,7.939)
C3': (-63.521,-111.068,5.459)
C1': (-62.544,-113.058,4.730)
C5': (-63.875,-111.915,7.846)
O6: (-66.088,-116.163,1.050)
O4': (-62.714,-113.129,6.123)
C8: (-64.771,-114.201,4.650)
C2: (-62.875,-114.684,0.804)
C6: (-65.081,-115.531,1.413)
C5: (-64.781,-114.936,2.665)
C4: (-63.592,-114.298,2.833)
P: (-66.312,-112.501,8.586)
C4': (-62.973,-111.811,6.651)
C2': (-62.649,-111.592,4.345)
O2': (-61.357,-111.023,4.416)
N1: (-64.035,-115.351,0.525)
N2: (-61.987,-114.621,-0.187)
N3: (-62.601,-114.122,1.961)
N7: (-65.516,-114.864,3.830)
N9: (-63.592,-113.846,4.098)
O5': (-65.168,-112.351,7.486)
O3': (-63.477,-109.673,5.598)
OP2: (-67.569,-112.984,7.939)
C3': (-63.521,-111.068,5.459)
C1': (-62.544,-113.058,4.730)
C5': (-63.875,-111.915,7.846)
O6: (-66.088,-116.163,1.050)
O4': (-62.714,-113.129,6.123)
C8: (-64.771,-114.201,4.650)
C2: (-62.875,-114.684,0.804)
C6: (-65.081,-115.531,1.413)
C5: (-64.781,-114.936,2.665)
C4: (-63.592,-114.298,2.833)
P: (-66.312,-112.501,8.586)
C4': (-62.973,-111.811,6.651)
C2': (-62.649,-111.592,4.345)
O2': (-61.357,-111.023,4.416)
N1: (-64.035,-115.351,0.525)
N2: (-61.987,-114.621,-0.187)
N3: (-62.601,-114.122,1.961)
N7: (-65.516,-114.864,3.830)
N9: (-63.592,-113.846,4.098)
O5': (-65.168,-112.351,7.486)
O3': (-63.477,-109.673,5.598)
Image (generated by PyMOL):