Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A521:A552
Extra
PDB:
ATOM 1 O3' U A 520 -35.153 122.729 223.532 1.00 0.01 O
ATOM 2 P A A 521 -36.372 121.712 223.294 1.00 0.01 P
ATOM 3 OP1 A A 521 -36.654 121.075 224.583 1.00 0.01 O
ATOM 4 OP2 A A 521 -36.005 120.860 222.141 1.00 0.01 O
ATOM 5 O5' A A 521 -37.588 122.668 222.901 1.00 0.01 O
ATOM 6 C5' A A 521 -38.354 123.319 223.897 1.00 0.01 C
ATOM 7 C4' A A 521 -39.629 123.880 223.332 1.00 0.01 C
ATOM 8 O4' A A 521 -39.313 124.875 222.346 1.00 0.01 O
ATOM 9 C3' A A 521 -40.505 122.896 222.597 1.00 0.01 C
ATOM 10 O3' A A 521 -41.345 122.168 223.452 1.00 0.01 O
ATOM 11 C2' A A 521 -41.265 123.764 221.621 1.00 0.01 C
ATOM 12 O2' A A 521 -42.357 124.404 222.261 1.00 0.01 O
ATOM 13 C1' A A 521 -40.210 124.796 221.264 1.00 0.01 C
ATOM 14 N9 A A 521 -39.436 124.415 220.058 1.00 0.01 N
ATOM 15 C8 A A 521 -38.237 123.747 220.055 1.00 0.01 C
ATOM 16 N7 A A 521 -37.735 123.561 218.865 1.00 0.01 N
ATOM 17 C5 A A 521 -38.664 124.146 218.025 1.00 0.01 C
ATOM 18 C6 A A 521 -38.689 124.276 216.633 1.00 0.01 C
ATOM 19 N6 A A 521 -37.717 123.776 215.855 1.00 0.01 N
ATOM 20 N1 A A 521 -39.741 124.929 216.089 1.00 0.01 N
ATOM 21 C2 A A 521 -40.686 125.399 216.898 1.00 0.01 C
ATOM 22 N3 A A 521 -40.759 125.333 218.218 1.00 0.01 N
ATOM 23 C4 A A 521 -39.710 124.689 218.731 1.00 0.01 C
ATOM 24 P C A 522 -41.726 120.666 223.068 1.00 0.01 P
ATOM 25 OP1 C A 522 -42.411 120.075 224.248 1.00 0.01 O
ATOM 26 OP2 C A 522 -40.480 120.014 222.548 1.00 0.01 O
ATOM 27 O5' C A 522 -42.761 120.870 221.890 1.00 0.01 O
TER
ATOM 1 O3' U B 551 -47.238 135.196 219.309 1.00 19.32 O
ATOM 2 P G B 552 -47.601 134.293 218.031 1.00 9.26 P
ATOM 3 OP1 G B 552 -47.085 135.023 216.831 1.00 9.26 O
ATOM 4 OP2 G B 552 -49.058 133.972 218.100 1.00 9.26 O
ATOM 5 O5' G B 552 -46.740 132.973 218.272 1.00 9.26 O
ATOM 6 C5' G B 552 -45.395 132.903 217.841 1.00 9.26 C
ATOM 7 C4' G B 552 -44.770 131.605 218.231 1.00 9.26 C
ATOM 8 O4' G B 552 -45.065 131.327 219.618 1.00 9.26 O
ATOM 9 C3' G B 552 -45.297 130.369 217.545 1.00 9.26 C
ATOM 10 O3' G B 552 -44.879 130.227 216.222 1.00 9.26 O
ATOM 11 C2' G B 552 -44.798 129.289 218.473 1.00 9.26 C
ATOM 12 O2' G B 552 -43.389 129.173 218.405 1.00 9.26 O
ATOM 13 C1' G B 552 -45.153 129.924 219.803 1.00 9.26 C
ATOM 14 N9 G B 552 -46.528 129.578 220.196 1.00 9.12 N
ATOM 15 C8 G B 552 -47.699 130.281 220.120 1.00 9.12 C
ATOM 16 N7 G B 552 -48.730 129.587 220.536 1.00 9.12 N
ATOM 17 C5 G B 552 -48.205 128.356 220.882 1.00 9.12 C
ATOM 18 C6 G B 552 -48.818 127.190 221.385 1.00 9.12 C
ATOM 19 O6 G B 552 -50.011 126.992 221.656 1.00 9.12 O
ATOM 20 N1 G B 552 -47.874 126.186 221.565 1.00 9.12 N
ATOM 21 C2 G B 552 -46.519 126.284 221.313 1.00 9.12 C
ATOM 22 N2 G B 552 -45.738 125.216 221.562 1.00 9.12 N
ATOM 23 N3 G B 552 -45.949 127.368 220.849 1.00 9.12 N
ATOM 24 C4 G B 552 -46.853 128.343 220.666 1.00 9.12 C
ATOM 25 P U B 553 -45.968 129.903 215.107 1.00 7.62 P
ATOM 26 OP1 U B 553 -45.443 130.402 213.827 1.00 7.62 O
ATOM 27 OP2 U B 553 -47.252 130.416 215.589 1.00 7.62 O
ATOM 28 O5' U B 553 -46.014 128.323 215.101 1.00 7.62 O
TER
ATOM 2 P A A 521 -36.372 121.712 223.294 1.00 0.01 P
ATOM 3 OP1 A A 521 -36.654 121.075 224.583 1.00 0.01 O
ATOM 4 OP2 A A 521 -36.005 120.860 222.141 1.00 0.01 O
ATOM 5 O5' A A 521 -37.588 122.668 222.901 1.00 0.01 O
ATOM 6 C5' A A 521 -38.354 123.319 223.897 1.00 0.01 C
ATOM 7 C4' A A 521 -39.629 123.880 223.332 1.00 0.01 C
ATOM 8 O4' A A 521 -39.313 124.875 222.346 1.00 0.01 O
ATOM 9 C3' A A 521 -40.505 122.896 222.597 1.00 0.01 C
ATOM 10 O3' A A 521 -41.345 122.168 223.452 1.00 0.01 O
ATOM 11 C2' A A 521 -41.265 123.764 221.621 1.00 0.01 C
ATOM 12 O2' A A 521 -42.357 124.404 222.261 1.00 0.01 O
ATOM 13 C1' A A 521 -40.210 124.796 221.264 1.00 0.01 C
ATOM 14 N9 A A 521 -39.436 124.415 220.058 1.00 0.01 N
ATOM 15 C8 A A 521 -38.237 123.747 220.055 1.00 0.01 C
ATOM 16 N7 A A 521 -37.735 123.561 218.865 1.00 0.01 N
ATOM 17 C5 A A 521 -38.664 124.146 218.025 1.00 0.01 C
ATOM 18 C6 A A 521 -38.689 124.276 216.633 1.00 0.01 C
ATOM 19 N6 A A 521 -37.717 123.776 215.855 1.00 0.01 N
ATOM 20 N1 A A 521 -39.741 124.929 216.089 1.00 0.01 N
ATOM 21 C2 A A 521 -40.686 125.399 216.898 1.00 0.01 C
ATOM 22 N3 A A 521 -40.759 125.333 218.218 1.00 0.01 N
ATOM 23 C4 A A 521 -39.710 124.689 218.731 1.00 0.01 C
ATOM 24 P C A 522 -41.726 120.666 223.068 1.00 0.01 P
ATOM 25 OP1 C A 522 -42.411 120.075 224.248 1.00 0.01 O
ATOM 26 OP2 C A 522 -40.480 120.014 222.548 1.00 0.01 O
ATOM 27 O5' C A 522 -42.761 120.870 221.890 1.00 0.01 O
TER
ATOM 1 O3' U B 551 -47.238 135.196 219.309 1.00 19.32 O
ATOM 2 P G B 552 -47.601 134.293 218.031 1.00 9.26 P
ATOM 3 OP1 G B 552 -47.085 135.023 216.831 1.00 9.26 O
ATOM 4 OP2 G B 552 -49.058 133.972 218.100 1.00 9.26 O
ATOM 5 O5' G B 552 -46.740 132.973 218.272 1.00 9.26 O
ATOM 6 C5' G B 552 -45.395 132.903 217.841 1.00 9.26 C
ATOM 7 C4' G B 552 -44.770 131.605 218.231 1.00 9.26 C
ATOM 8 O4' G B 552 -45.065 131.327 219.618 1.00 9.26 O
ATOM 9 C3' G B 552 -45.297 130.369 217.545 1.00 9.26 C
ATOM 10 O3' G B 552 -44.879 130.227 216.222 1.00 9.26 O
ATOM 11 C2' G B 552 -44.798 129.289 218.473 1.00 9.26 C
ATOM 12 O2' G B 552 -43.389 129.173 218.405 1.00 9.26 O
ATOM 13 C1' G B 552 -45.153 129.924 219.803 1.00 9.26 C
ATOM 14 N9 G B 552 -46.528 129.578 220.196 1.00 9.12 N
ATOM 15 C8 G B 552 -47.699 130.281 220.120 1.00 9.12 C
ATOM 16 N7 G B 552 -48.730 129.587 220.536 1.00 9.12 N
ATOM 17 C5 G B 552 -48.205 128.356 220.882 1.00 9.12 C
ATOM 18 C6 G B 552 -48.818 127.190 221.385 1.00 9.12 C
ATOM 19 O6 G B 552 -50.011 126.992 221.656 1.00 9.12 O
ATOM 20 N1 G B 552 -47.874 126.186 221.565 1.00 9.12 N
ATOM 21 C2 G B 552 -46.519 126.284 221.313 1.00 9.12 C
ATOM 22 N2 G B 552 -45.738 125.216 221.562 1.00 9.12 N
ATOM 23 N3 G B 552 -45.949 127.368 220.849 1.00 9.12 N
ATOM 24 C4 G B 552 -46.853 128.343 220.666 1.00 9.12 C
ATOM 25 P U B 553 -45.968 129.903 215.107 1.00 7.62 P
ATOM 26 OP1 U B 553 -45.443 130.402 213.827 1.00 7.62 O
ATOM 27 OP2 U B 553 -47.252 130.416 215.589 1.00 7.62 O
ATOM 28 O5' U B 553 -46.014 128.323 215.101 1.00 7.62 O
TER
Atoms:
OP1: (-36.654,121.075,224.583)
OP2: (-36.005,120.860,222.141)
C3': (-40.505,122.896,222.597)
C1': (-40.210,124.796,221.264)
C5': (-38.354,123.319,223.897)
O4': (-39.313,124.875,222.346)
C8: (-38.237,123.747,220.055)
O2': (-42.357,124.404,222.261)
C6: (-38.689,124.276,216.633)
C5: (-38.664,124.146,218.025)
C4: (-39.710,124.689,218.731)
P: (-36.372,121.712,223.294)
C4': (-39.629,123.880,223.332)
C2': (-41.265,123.764,221.621)
C2: (-40.686,125.399,216.898)
N1: (-39.741,124.929,216.089)
N3: (-40.759,125.333,218.218)
N6: (-37.717,123.776,215.855)
N7: (-37.735,123.561,218.865)
N9: (-39.436,124.415,220.058)
O5': (-37.588,122.668,222.901)
O3': (-41.345,122.168,223.452)
OP2: (-36.005,120.860,222.141)
C3': (-40.505,122.896,222.597)
C1': (-40.210,124.796,221.264)
C5': (-38.354,123.319,223.897)
O4': (-39.313,124.875,222.346)
C8: (-38.237,123.747,220.055)
O2': (-42.357,124.404,222.261)
C6: (-38.689,124.276,216.633)
C5: (-38.664,124.146,218.025)
C4: (-39.710,124.689,218.731)
P: (-36.372,121.712,223.294)
C4': (-39.629,123.880,223.332)
C2': (-41.265,123.764,221.621)
C2: (-40.686,125.399,216.898)
N1: (-39.741,124.929,216.089)
N3: (-40.759,125.333,218.218)
N6: (-37.717,123.776,215.855)
N7: (-37.735,123.561,218.865)
N9: (-39.436,124.415,220.058)
O5': (-37.588,122.668,222.901)
O3': (-41.345,122.168,223.452)
OP1: (-47.085,135.023,216.831)
OP2: (-49.058,133.972,218.100)
C3': (-45.297,130.369,217.545)
C1': (-45.153,129.924,219.803)
C5': (-45.395,132.903,217.841)
O6: (-50.011,126.992,221.656)
O4': (-45.065,131.327,219.618)
C8: (-47.699,130.281,220.120)
C2: (-46.519,126.284,221.313)
C6: (-48.818,127.190,221.385)
C5: (-48.205,128.356,220.882)
C4: (-46.853,128.343,220.666)
P: (-47.601,134.293,218.031)
C4': (-44.770,131.605,218.231)
C2': (-44.798,129.289,218.473)
O2': (-43.389,129.173,218.405)
N1: (-47.874,126.186,221.565)
N2: (-45.738,125.216,221.562)
N3: (-45.949,127.368,220.849)
N7: (-48.730,129.587,220.536)
N9: (-46.528,129.578,220.196)
O5': (-46.740,132.973,218.272)
O3': (-44.879,130.227,216.222)
OP2: (-49.058,133.972,218.100)
C3': (-45.297,130.369,217.545)
C1': (-45.153,129.924,219.803)
C5': (-45.395,132.903,217.841)
O6: (-50.011,126.992,221.656)
O4': (-45.065,131.327,219.618)
C8: (-47.699,130.281,220.120)
C2: (-46.519,126.284,221.313)
C6: (-48.818,127.190,221.385)
C5: (-48.205,128.356,220.882)
C4: (-46.853,128.343,220.666)
P: (-47.601,134.293,218.031)
C4': (-44.770,131.605,218.231)
C2': (-44.798,129.289,218.473)
O2': (-43.389,129.173,218.405)
N1: (-47.874,126.186,221.565)
N2: (-45.738,125.216,221.562)
N3: (-45.949,127.368,220.849)
N7: (-48.730,129.587,220.536)
N9: (-46.528,129.578,220.196)
O5': (-46.740,132.973,218.272)
O3': (-44.879,130.227,216.222)
Image (generated by PyMOL):