Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1O9M:A14:A15
Extra
PDB:
ATOM 1 O3' G A 13 12.424 -4.846 24.091 1.00 66.81 O
ATOM 2 P A A 14 13.697 -5.808 24.327 1.00 70.48 P
ATOM 3 OP1 A A 14 14.744 -5.007 25.022 1.00 68.62 O
ATOM 4 OP2 A A 14 14.023 -6.507 23.046 1.00 68.91 O
ATOM 5 O5' A A 14 13.173 -6.878 25.381 1.00 68.74 O
ATOM 6 C5' A A 14 11.934 -7.550 25.195 1.00 69.98 C
ATOM 7 C4' A A 14 12.017 -8.931 25.789 1.00 70.33 C
ATOM 8 O4' A A 14 12.502 -8.807 27.149 1.00 69.06 O
ATOM 9 C3' A A 14 10.707 -9.686 25.924 1.00 71.78 C
ATOM 10 O3' A A 14 10.220 -10.222 24.676 1.00 75.17 O
ATOM 11 C2' A A 14 10.962 -10.642 27.092 1.00 70.84 C
ATOM 12 O2' A A 14 11.541 -11.891 26.767 1.00 73.66 O
ATOM 13 C1' A A 14 11.965 -9.848 27.938 1.00 67.09 C
ATOM 14 N9 A A 14 11.499 -9.302 29.218 1.00 61.41 N
ATOM 15 C8 A A 14 12.114 -9.487 30.438 1.00 58.41 C
ATOM 16 N7 A A 14 11.488 -8.926 31.438 1.00 56.10 N
ATOM 17 C5 A A 14 10.388 -8.322 30.844 1.00 56.35 C
ATOM 18 C6 A A 14 9.327 -7.564 31.376 1.00 56.08 C
ATOM 19 N6 A A 14 9.194 -7.292 32.683 1.00 53.41 N
ATOM 20 N1 A A 14 8.394 -7.097 30.510 1.00 54.01 N
ATOM 21 C2 A A 14 8.529 -7.386 29.211 1.00 53.45 C
ATOM 22 N3 A A 14 9.476 -8.095 28.595 1.00 54.88 N
ATOM 23 C4 A A 14 10.386 -8.539 29.476 1.00 57.00 C
ATOM 24 P A A 15 11.019 -11.392 23.880 1.00 77.94 P
ATOM 25 OP1 A A 15 12.081 -12.005 24.717 1.00 77.75 O
ATOM 26 OP2 A A 15 11.385 -10.841 22.547 1.00 79.00 O
ATOM 27 O5' A A 15 9.892 -12.488 23.612 1.00 77.55 O
TER
ATOM 1 O3' A B 14 10.220 -10.222 24.676 1.00 75.17 O
ATOM 2 P A B 15 11.019 -11.392 23.880 1.00 77.94 P
ATOM 3 OP1 A B 15 12.081 -12.005 24.717 1.00 77.75 O
ATOM 4 OP2 A B 15 11.385 -10.841 22.547 1.00 79.00 O
ATOM 5 O5' A B 15 9.892 -12.488 23.612 1.00 77.55 O
ATOM 6 C5' A B 15 9.214 -13.105 24.697 1.00 80.07 C
ATOM 7 C4' A B 15 7.782 -13.426 24.324 1.00 81.45 C
ATOM 8 O4' A B 15 6.975 -12.220 24.217 1.00 82.88 O
ATOM 9 C3' A B 15 7.549 -14.093 22.985 1.00 81.39 C
ATOM 10 O3' A B 15 7.929 -15.462 23.017 1.00 81.37 O
ATOM 11 C2' A B 15 6.043 -13.899 22.823 1.00 82.11 C
ATOM 12 O2' A B 15 5.275 -14.803 23.594 1.00 81.85 O
ATOM 13 C1' A B 15 5.863 -12.475 23.362 1.00 83.10 C
ATOM 14 N9 A B 15 5.867 -11.505 22.265 1.00 84.18 N
ATOM 15 C8 A B 15 5.305 -11.693 21.028 1.00 84.47 C
ATOM 16 N7 A B 15 5.485 -10.691 20.205 1.00 85.18 N
ATOM 17 C5 A B 15 6.205 -9.771 20.952 1.00 85.27 C
ATOM 18 C6 A B 15 6.719 -8.502 20.642 1.00 86.01 C
ATOM 19 N6 A B 15 6.606 -7.931 19.439 1.00 86.08 N
ATOM 20 N1 A B 15 7.373 -7.834 21.619 1.00 86.37 N
ATOM 21 C2 A B 15 7.504 -8.418 22.817 1.00 85.92 C
ATOM 22 N3 A B 15 7.078 -9.613 23.224 1.00 85.49 N
ATOM 23 C4 A B 15 6.429 -10.249 22.232 1.00 84.90 C
ATOM 24 P G B 16 8.677 -16.108 21.750 1.00 79.98 P
ATOM 25 OP1 G B 16 8.932 -17.536 22.073 1.00 80.56 O
ATOM 26 OP2 G B 16 9.810 -15.226 21.365 1.00 80.08 O
ATOM 27 O5' G B 16 7.574 -16.043 20.605 1.00 79.34 O
TER
ATOM 2 P A A 14 13.697 -5.808 24.327 1.00 70.48 P
ATOM 3 OP1 A A 14 14.744 -5.007 25.022 1.00 68.62 O
ATOM 4 OP2 A A 14 14.023 -6.507 23.046 1.00 68.91 O
ATOM 5 O5' A A 14 13.173 -6.878 25.381 1.00 68.74 O
ATOM 6 C5' A A 14 11.934 -7.550 25.195 1.00 69.98 C
ATOM 7 C4' A A 14 12.017 -8.931 25.789 1.00 70.33 C
ATOM 8 O4' A A 14 12.502 -8.807 27.149 1.00 69.06 O
ATOM 9 C3' A A 14 10.707 -9.686 25.924 1.00 71.78 C
ATOM 10 O3' A A 14 10.220 -10.222 24.676 1.00 75.17 O
ATOM 11 C2' A A 14 10.962 -10.642 27.092 1.00 70.84 C
ATOM 12 O2' A A 14 11.541 -11.891 26.767 1.00 73.66 O
ATOM 13 C1' A A 14 11.965 -9.848 27.938 1.00 67.09 C
ATOM 14 N9 A A 14 11.499 -9.302 29.218 1.00 61.41 N
ATOM 15 C8 A A 14 12.114 -9.487 30.438 1.00 58.41 C
ATOM 16 N7 A A 14 11.488 -8.926 31.438 1.00 56.10 N
ATOM 17 C5 A A 14 10.388 -8.322 30.844 1.00 56.35 C
ATOM 18 C6 A A 14 9.327 -7.564 31.376 1.00 56.08 C
ATOM 19 N6 A A 14 9.194 -7.292 32.683 1.00 53.41 N
ATOM 20 N1 A A 14 8.394 -7.097 30.510 1.00 54.01 N
ATOM 21 C2 A A 14 8.529 -7.386 29.211 1.00 53.45 C
ATOM 22 N3 A A 14 9.476 -8.095 28.595 1.00 54.88 N
ATOM 23 C4 A A 14 10.386 -8.539 29.476 1.00 57.00 C
ATOM 24 P A A 15 11.019 -11.392 23.880 1.00 77.94 P
ATOM 25 OP1 A A 15 12.081 -12.005 24.717 1.00 77.75 O
ATOM 26 OP2 A A 15 11.385 -10.841 22.547 1.00 79.00 O
ATOM 27 O5' A A 15 9.892 -12.488 23.612 1.00 77.55 O
TER
ATOM 1 O3' A B 14 10.220 -10.222 24.676 1.00 75.17 O
ATOM 2 P A B 15 11.019 -11.392 23.880 1.00 77.94 P
ATOM 3 OP1 A B 15 12.081 -12.005 24.717 1.00 77.75 O
ATOM 4 OP2 A B 15 11.385 -10.841 22.547 1.00 79.00 O
ATOM 5 O5' A B 15 9.892 -12.488 23.612 1.00 77.55 O
ATOM 6 C5' A B 15 9.214 -13.105 24.697 1.00 80.07 C
ATOM 7 C4' A B 15 7.782 -13.426 24.324 1.00 81.45 C
ATOM 8 O4' A B 15 6.975 -12.220 24.217 1.00 82.88 O
ATOM 9 C3' A B 15 7.549 -14.093 22.985 1.00 81.39 C
ATOM 10 O3' A B 15 7.929 -15.462 23.017 1.00 81.37 O
ATOM 11 C2' A B 15 6.043 -13.899 22.823 1.00 82.11 C
ATOM 12 O2' A B 15 5.275 -14.803 23.594 1.00 81.85 O
ATOM 13 C1' A B 15 5.863 -12.475 23.362 1.00 83.10 C
ATOM 14 N9 A B 15 5.867 -11.505 22.265 1.00 84.18 N
ATOM 15 C8 A B 15 5.305 -11.693 21.028 1.00 84.47 C
ATOM 16 N7 A B 15 5.485 -10.691 20.205 1.00 85.18 N
ATOM 17 C5 A B 15 6.205 -9.771 20.952 1.00 85.27 C
ATOM 18 C6 A B 15 6.719 -8.502 20.642 1.00 86.01 C
ATOM 19 N6 A B 15 6.606 -7.931 19.439 1.00 86.08 N
ATOM 20 N1 A B 15 7.373 -7.834 21.619 1.00 86.37 N
ATOM 21 C2 A B 15 7.504 -8.418 22.817 1.00 85.92 C
ATOM 22 N3 A B 15 7.078 -9.613 23.224 1.00 85.49 N
ATOM 23 C4 A B 15 6.429 -10.249 22.232 1.00 84.90 C
ATOM 24 P G B 16 8.677 -16.108 21.750 1.00 79.98 P
ATOM 25 OP1 G B 16 8.932 -17.536 22.073 1.00 80.56 O
ATOM 26 OP2 G B 16 9.810 -15.226 21.365 1.00 80.08 O
ATOM 27 O5' G B 16 7.574 -16.043 20.605 1.00 79.34 O
TER
Atoms:
OP1: (14.744,-5.007,25.022)
OP2: (14.023,-6.507,23.046)
C3': (10.707,-9.686,25.924)
C1': (11.965,-9.848,27.938)
C5': (11.934,-7.550,25.195)
O4': (12.502,-8.807,27.149)
C8: (12.114,-9.487,30.438)
O2': (11.541,-11.891,26.767)
C6: (9.327,-7.564,31.376)
C5: (10.388,-8.322,30.844)
C4: (10.386,-8.539,29.476)
P: (13.697,-5.808,24.327)
C4': (12.017,-8.931,25.789)
C2': (10.962,-10.642,27.092)
C2: (8.529,-7.386,29.211)
N1: (8.394,-7.097,30.510)
N3: (9.476,-8.095,28.595)
N6: (9.194,-7.292,32.683)
N7: (11.488,-8.926,31.438)
N9: (11.499,-9.302,29.218)
O5': (13.173,-6.878,25.381)
O3': (10.220,-10.222,24.676)
OP2: (14.023,-6.507,23.046)
C3': (10.707,-9.686,25.924)
C1': (11.965,-9.848,27.938)
C5': (11.934,-7.550,25.195)
O4': (12.502,-8.807,27.149)
C8: (12.114,-9.487,30.438)
O2': (11.541,-11.891,26.767)
C6: (9.327,-7.564,31.376)
C5: (10.388,-8.322,30.844)
C4: (10.386,-8.539,29.476)
P: (13.697,-5.808,24.327)
C4': (12.017,-8.931,25.789)
C2': (10.962,-10.642,27.092)
C2: (8.529,-7.386,29.211)
N1: (8.394,-7.097,30.510)
N3: (9.476,-8.095,28.595)
N6: (9.194,-7.292,32.683)
N7: (11.488,-8.926,31.438)
N9: (11.499,-9.302,29.218)
O5': (13.173,-6.878,25.381)
O3': (10.220,-10.222,24.676)
OP1: (12.081,-12.005,24.717)
OP2: (11.385,-10.841,22.547)
C3': (7.549,-14.093,22.985)
C1': (5.863,-12.475,23.362)
C5': (9.214,-13.105,24.697)
O4': (6.975,-12.220,24.217)
C8: (5.305,-11.693,21.028)
O2': (5.275,-14.803,23.594)
C6: (6.719,-8.502,20.642)
C5: (6.205,-9.771,20.952)
C4: (6.429,-10.249,22.232)
P: (11.019,-11.392,23.880)
C4': (7.782,-13.426,24.324)
C2': (6.043,-13.899,22.823)
C2: (7.504,-8.418,22.817)
N1: (7.373,-7.834,21.619)
N3: (7.078,-9.613,23.224)
N6: (6.606,-7.931,19.439)
N7: (5.485,-10.691,20.205)
N9: (5.867,-11.505,22.265)
O5': (9.892,-12.488,23.612)
O3': (7.929,-15.462,23.017)
OP2: (11.385,-10.841,22.547)
C3': (7.549,-14.093,22.985)
C1': (5.863,-12.475,23.362)
C5': (9.214,-13.105,24.697)
O4': (6.975,-12.220,24.217)
C8: (5.305,-11.693,21.028)
O2': (5.275,-14.803,23.594)
C6: (6.719,-8.502,20.642)
C5: (6.205,-9.771,20.952)
C4: (6.429,-10.249,22.232)
P: (11.019,-11.392,23.880)
C4': (7.782,-13.426,24.324)
C2': (6.043,-13.899,22.823)
C2: (7.504,-8.418,22.817)
N1: (7.373,-7.834,21.619)
N3: (7.078,-9.613,23.224)
N6: (6.606,-7.931,19.439)
N7: (5.485,-10.691,20.205)
N9: (5.867,-11.505,22.265)
O5': (9.892,-12.488,23.612)
O3': (7.929,-15.462,23.017)
Image (generated by PyMOL):