ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ET8:A14:A15

Extra

PDB:
ATOM 1 O3' G A 13 3.525 -5.741 19.059 1.00 70.95 O
ATOM 2 P A A 14 2.234 -6.671 18.924 1.00 73.00 P
ATOM 3 OP1 A A 14 1.281 -5.991 18.006 1.00 73.20 O
ATOM 4 OP2 A A 14 1.798 -7.039 20.304 1.00 72.53 O
ATOM 5 O5' A A 14 2.797 -7.959 18.187 1.00 71.83 O
ATOM 6 C5' A A 14 4.150 -8.347 18.351 1.00 71.77 C
ATOM 7 C4' A A 14 4.323 -9.759 17.883 1.00 71.76 C
ATOM 8 O4' A A 14 3.938 -9.834 16.485 1.00 70.46 O
ATOM 9 C3' A A 14 5.739 -10.298 17.930 1.00 72.53 C
ATOM 10 O3' A A 14 6.141 -10.652 19.275 1.00 76.66 O
ATOM 11 C2' A A 14 5.723 -11.365 16.833 1.00 70.86 C
ATOM 12 O2' A A 14 5.110 -12.586 17.197 1.00 70.93 O
ATOM 13 C1' A A 14 4.800 -10.718 15.798 1.00 68.70 C
ATOM 14 N9 A A 14 5.407 -10.004 14.663 1.00 65.92 N
ATOM 15 C8 A A 14 4.894 -9.971 13.388 1.00 63.89 C
ATOM 16 N7 A A 14 5.621 -9.288 12.539 1.00 61.83 N
ATOM 17 C5 A A 14 6.685 -8.834 13.299 1.00 61.18 C
ATOM 18 C6 A A 14 7.806 -8.053 12.974 1.00 60.15 C
ATOM 19 N6 A A 14 8.056 -7.588 11.750 1.00 57.83 N
ATOM 20 N1 A A 14 8.675 -7.762 13.962 1.00 60.43 N
ATOM 21 C2 A A 14 8.427 -8.234 15.188 1.00 62.52 C
ATOM 22 N3 A A 14 7.411 -8.989 15.618 1.00 63.14 N
ATOM 23 C4 A A 14 6.565 -9.259 14.614 1.00 63.08 C
ATOM 24 P A A 15 5.302 -11.735 20.160 1.00 80.67 P
ATOM 25 OP1 A A 15 4.041 -12.147 19.488 1.00 80.73 O
ATOM 26 OP2 A A 15 5.247 -11.225 21.553 1.00 80.45 O
ATOM 27 O5' A A 15 6.248 -13.004 20.187 1.00 82.60 O
TER

ATOM 1 O3' A B 14 6.141 -10.652 19.275 1.00 76.66 O
ATOM 2 P A B 15 5.302 -11.735 20.160 1.00 80.67 P
ATOM 3 OP1 A B 15 4.041 -12.147 19.488 1.00 80.73 O
ATOM 4 OP2 A B 15 5.247 -11.225 21.553 1.00 80.45 O
ATOM 5 O5' A B 15 6.248 -13.004 20.187 1.00 82.60 O
ATOM 6 C5' A B 15 6.865 -13.447 18.998 1.00 88.28 C
ATOM 7 C4' A B 15 8.331 -13.674 19.231 1.00 92.01 C
ATOM 8 O4' A B 15 9.068 -12.423 19.363 1.00 93.70 O
ATOM 9 C3' A B 15 8.657 -14.388 20.518 1.00 93.97 C
ATOM 10 O3' A B 15 8.240 -15.753 20.434 1.00 95.02 O
ATOM 11 C2' A B 15 10.161 -14.115 20.611 1.00 94.40 C
ATOM 12 O2' A B 15 10.940 -14.912 19.733 1.00 93.77 O
ATOM 13 C1' A B 15 10.222 -12.641 20.171 1.00 93.91 C
ATOM 14 N9 A B 15 10.177 -11.726 21.319 1.00 94.54 N
ATOM 15 C8 A B 15 10.894 -11.853 22.489 1.00 95.08 C
ATOM 16 N7 A B 15 10.613 -10.939 23.388 1.00 94.70 N
ATOM 17 C5 A B 15 9.658 -10.146 22.768 1.00 94.42 C
ATOM 18 C6 A B 15 8.932 -9.028 23.211 1.00 93.71 C
ATOM 19 N6 A B 15 9.038 -8.518 24.436 1.00 92.80 N
ATOM 20 N1 A B 15 8.069 -8.456 22.345 1.00 93.91 N
ATOM 21 C2 A B 15 7.937 -8.993 21.125 1.00 94.53 C
ATOM 22 N3 A B 15 8.546 -10.057 20.598 1.00 94.74 N
ATOM 23 C4 A B 15 9.402 -10.598 21.480 1.00 94.61 C
ATOM 24 P G B 16 7.249 -16.358 21.564 1.00 95.84 P
ATOM 25 OP1 G B 16 6.600 -17.568 20.988 1.00 96.08 O
ATOM 26 OP2 G B 16 6.405 -15.277 22.152 1.00 94.75 O
ATOM 27 O5' G B 16 8.269 -16.832 22.683 1.00 92.82 O
TER

Atoms:
OP1: (1.281,-5.991,18.006)
OP2: (1.798,-7.039,20.304)
C3': (5.739,-10.298,17.930)
C1': (4.800,-10.718,15.798)
C5': (4.150,-8.347,18.351)
O4': (3.938,-9.834,16.485)
C8: (4.894,-9.971,13.388)
O2': (5.110,-12.586,17.197)
C6: (7.806,-8.053,12.974)
C5: (6.685,-8.834,13.299)
C4: (6.565,-9.259,14.614)
P: (2.234,-6.671,18.924)
C4': (4.323,-9.759,17.883)
C2': (5.723,-11.365,16.833)
C2: (8.427,-8.234,15.188)
N1: (8.675,-7.762,13.962)
N3: (7.411,-8.989,15.618)
N6: (8.056,-7.588,11.750)
N7: (5.621,-9.288,12.539)
N9: (5.407,-10.004,14.663)
O5': (2.797,-7.959,18.187)
O3': (6.141,-10.652,19.275)
OP1: (4.041,-12.147,19.488)
OP2: (5.247,-11.225,21.553)
C3': (8.657,-14.388,20.518)
C1': (10.222,-12.641,20.171)
C5': (6.865,-13.447,18.998)
O4': (9.068,-12.423,19.363)
C8: (10.894,-11.853,22.489)
O2': (10.940,-14.912,19.733)
C6: (8.932,-9.028,23.211)
C5: (9.658,-10.146,22.768)
C4: (9.402,-10.598,21.480)
P: (5.302,-11.735,20.160)
C4': (8.331,-13.674,19.231)
C2': (10.161,-14.115,20.611)
C2: (7.937,-8.993,21.125)
N1: (8.069,-8.456,22.345)
N3: (8.546,-10.057,20.598)
N6: (9.038,-8.518,24.436)
N7: (10.613,-10.939,23.388)
N9: (10.177,-11.726,21.319)
O5': (6.248,-13.004,20.187)
O3': (8.240,-15.753,20.434)
Image (generated by PyMOL):
PyMOL image
show in jmol