Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A535:A562
Extra
PDB:
ATOM 1 O3' G A 534 62.776-114.383 -4.519 1.00 44.56 O
ATOM 2 P G A 535 63.901-114.285 -3.381 1.00 59.18 P
ATOM 3 OP1 G A 535 63.807-115.483 -2.511 1.00 55.33 O
ATOM 4 OP2 G A 535 63.802-112.930 -2.778 1.00 48.89 O
ATOM 5 O5' G A 535 65.267-114.406 -4.185 1.00 53.87 O
ATOM 6 C5' G A 535 65.788-115.678 -4.561 1.00 54.10 C
ATOM 7 C4' G A 535 67.133-115.503 -5.228 1.00 57.80 C
ATOM 8 O4' G A 535 66.951-114.614 -6.365 1.00 53.58 O
ATOM 9 C3' G A 535 68.210-114.811 -4.394 1.00 53.91 C
ATOM 10 O3' G A 535 68.924-115.668 -3.504 1.00 49.51 O
ATOM 11 C2' G A 535 69.104-114.197 -5.462 1.00 55.32 C
ATOM 12 O2' G A 535 70.010-115.118 -6.050 1.00 53.47 O
ATOM 13 C1' G A 535 68.065-113.749 -6.485 1.00 53.78 C
ATOM 14 N9 G A 535 67.635-112.388 -6.178 1.00 50.73 N
ATOM 15 C8 G A 535 66.469-111.989 -5.571 1.00 57.69 C
ATOM 16 N7 G A 535 66.406-110.699 -5.381 1.00 58.80 N
ATOM 17 C5 G A 535 67.597-110.218 -5.908 1.00 55.61 C
ATOM 18 C6 G A 535 68.098-108.898 -5.991 1.00 51.85 C
ATOM 19 O6 G A 535 67.580-107.850 -5.598 1.00 47.75 O
ATOM 20 N1 G A 535 69.341-108.863 -6.604 1.00 52.71 N
ATOM 21 C2 G A 535 70.020-109.958 -7.080 1.00 54.28 C
ATOM 22 N2 G A 535 71.215-109.726 -7.644 1.00 57.07 N
ATOM 23 N3 G A 535 69.566-111.190 -7.008 1.00 54.09 N
ATOM 24 C4 G A 535 68.358-111.247 -6.414 1.00 52.07 C
ATOM 25 P C A 536 69.435-115.099 -2.074 1.00 55.91 P
ATOM 26 OP1 C A 536 69.977-116.262 -1.317 1.00 50.58 O
ATOM 27 OP2 C A 536 68.384-114.237 -1.452 1.00 51.76 O
ATOM 28 O5' C A 536 70.666-114.148 -2.439 1.00 56.13 O
TER
ATOM 1 O3' G B 561 77.575-112.319 -16.045 1.00 68.23 O
ATOM 2 P G B 562 78.314-111.053 -15.398 1.00 62.61 P
ATOM 3 OP1 G B 562 78.195-109.895 -16.321 1.00 52.65 O
ATOM 4 OP2 G B 562 79.658-111.529 -14.977 1.00 63.58 O
ATOM 5 O5' G B 562 77.435-110.746 -14.108 1.00 57.38 O
ATOM 6 C5' G B 562 76.038-110.510 -14.246 1.00 60.38 C
ATOM 7 C4' G B 562 75.318-110.677 -12.930 1.00 55.88 C
ATOM 8 O4' G B 562 75.308-112.060 -12.499 1.00 58.15 O
ATOM 9 C3' G B 562 75.806-109.906 -11.718 1.00 54.65 C
ATOM 10 O3' G B 562 75.340-108.573 -11.763 1.00 50.22 O
ATOM 11 C2' G B 562 75.132-110.656 -10.574 1.00 58.04 C
ATOM 12 O2' G B 562 73.802-110.217 -10.387 1.00 60.49 O
ATOM 13 C1' G B 562 75.112-112.095 -11.098 1.00 56.51 C
ATOM 14 N9 G B 562 76.150-112.907 -10.479 1.00 56.86 N
ATOM 15 C8 G B 562 77.353-113.307 -11.014 1.00 62.96 C
ATOM 16 N7 G B 562 78.077-113.999 -10.178 1.00 62.84 N
ATOM 17 C5 G B 562 77.301-114.071 -9.030 1.00 65.18 C
ATOM 18 C6 G B 562 77.558-114.696 -7.776 1.00 63.20 C
ATOM 19 O6 G B 562 78.560-115.340 -7.422 1.00 59.38 O
ATOM 20 N1 G B 562 76.504-114.512 -6.887 1.00 59.58 N
ATOM 21 C2 G B 562 75.353-113.811 -7.161 1.00 58.10 C
ATOM 22 N2 G B 562 74.462-113.720 -6.157 1.00 57.48 N
ATOM 23 N3 G B 562 75.097-113.235 -8.327 1.00 58.55 N
ATOM 24 C4 G B 562 76.107-113.404 -9.206 1.00 60.89 C
ATOM 25 P U B 563 76.109-107.445 -10.941 1.00 50.90 P
ATOM 26 OP1 U B 563 75.386-106.187 -11.161 1.00 46.58 O
ATOM 27 OP2 U B 563 77.553-107.540 -11.285 1.00 54.75 O
ATOM 28 O5' U B 563 75.908-107.858 -9.414 1.00 50.48 O
TER
ATOM 2 P G A 535 63.901-114.285 -3.381 1.00 59.18 P
ATOM 3 OP1 G A 535 63.807-115.483 -2.511 1.00 55.33 O
ATOM 4 OP2 G A 535 63.802-112.930 -2.778 1.00 48.89 O
ATOM 5 O5' G A 535 65.267-114.406 -4.185 1.00 53.87 O
ATOM 6 C5' G A 535 65.788-115.678 -4.561 1.00 54.10 C
ATOM 7 C4' G A 535 67.133-115.503 -5.228 1.00 57.80 C
ATOM 8 O4' G A 535 66.951-114.614 -6.365 1.00 53.58 O
ATOM 9 C3' G A 535 68.210-114.811 -4.394 1.00 53.91 C
ATOM 10 O3' G A 535 68.924-115.668 -3.504 1.00 49.51 O
ATOM 11 C2' G A 535 69.104-114.197 -5.462 1.00 55.32 C
ATOM 12 O2' G A 535 70.010-115.118 -6.050 1.00 53.47 O
ATOM 13 C1' G A 535 68.065-113.749 -6.485 1.00 53.78 C
ATOM 14 N9 G A 535 67.635-112.388 -6.178 1.00 50.73 N
ATOM 15 C8 G A 535 66.469-111.989 -5.571 1.00 57.69 C
ATOM 16 N7 G A 535 66.406-110.699 -5.381 1.00 58.80 N
ATOM 17 C5 G A 535 67.597-110.218 -5.908 1.00 55.61 C
ATOM 18 C6 G A 535 68.098-108.898 -5.991 1.00 51.85 C
ATOM 19 O6 G A 535 67.580-107.850 -5.598 1.00 47.75 O
ATOM 20 N1 G A 535 69.341-108.863 -6.604 1.00 52.71 N
ATOM 21 C2 G A 535 70.020-109.958 -7.080 1.00 54.28 C
ATOM 22 N2 G A 535 71.215-109.726 -7.644 1.00 57.07 N
ATOM 23 N3 G A 535 69.566-111.190 -7.008 1.00 54.09 N
ATOM 24 C4 G A 535 68.358-111.247 -6.414 1.00 52.07 C
ATOM 25 P C A 536 69.435-115.099 -2.074 1.00 55.91 P
ATOM 26 OP1 C A 536 69.977-116.262 -1.317 1.00 50.58 O
ATOM 27 OP2 C A 536 68.384-114.237 -1.452 1.00 51.76 O
ATOM 28 O5' C A 536 70.666-114.148 -2.439 1.00 56.13 O
TER
ATOM 1 O3' G B 561 77.575-112.319 -16.045 1.00 68.23 O
ATOM 2 P G B 562 78.314-111.053 -15.398 1.00 62.61 P
ATOM 3 OP1 G B 562 78.195-109.895 -16.321 1.00 52.65 O
ATOM 4 OP2 G B 562 79.658-111.529 -14.977 1.00 63.58 O
ATOM 5 O5' G B 562 77.435-110.746 -14.108 1.00 57.38 O
ATOM 6 C5' G B 562 76.038-110.510 -14.246 1.00 60.38 C
ATOM 7 C4' G B 562 75.318-110.677 -12.930 1.00 55.88 C
ATOM 8 O4' G B 562 75.308-112.060 -12.499 1.00 58.15 O
ATOM 9 C3' G B 562 75.806-109.906 -11.718 1.00 54.65 C
ATOM 10 O3' G B 562 75.340-108.573 -11.763 1.00 50.22 O
ATOM 11 C2' G B 562 75.132-110.656 -10.574 1.00 58.04 C
ATOM 12 O2' G B 562 73.802-110.217 -10.387 1.00 60.49 O
ATOM 13 C1' G B 562 75.112-112.095 -11.098 1.00 56.51 C
ATOM 14 N9 G B 562 76.150-112.907 -10.479 1.00 56.86 N
ATOM 15 C8 G B 562 77.353-113.307 -11.014 1.00 62.96 C
ATOM 16 N7 G B 562 78.077-113.999 -10.178 1.00 62.84 N
ATOM 17 C5 G B 562 77.301-114.071 -9.030 1.00 65.18 C
ATOM 18 C6 G B 562 77.558-114.696 -7.776 1.00 63.20 C
ATOM 19 O6 G B 562 78.560-115.340 -7.422 1.00 59.38 O
ATOM 20 N1 G B 562 76.504-114.512 -6.887 1.00 59.58 N
ATOM 21 C2 G B 562 75.353-113.811 -7.161 1.00 58.10 C
ATOM 22 N2 G B 562 74.462-113.720 -6.157 1.00 57.48 N
ATOM 23 N3 G B 562 75.097-113.235 -8.327 1.00 58.55 N
ATOM 24 C4 G B 562 76.107-113.404 -9.206 1.00 60.89 C
ATOM 25 P U B 563 76.109-107.445 -10.941 1.00 50.90 P
ATOM 26 OP1 U B 563 75.386-106.187 -11.161 1.00 46.58 O
ATOM 27 OP2 U B 563 77.553-107.540 -11.285 1.00 54.75 O
ATOM 28 O5' U B 563 75.908-107.858 -9.414 1.00 50.48 O
TER
Atoms:
OP1: (63.807,-115.483,-2.511)
OP2: (63.802,-112.930,-2.778)
C3': (68.210,-114.811,-4.394)
C1': (68.065,-113.749,-6.485)
C5': (65.788,-115.678,-4.561)
O6: (67.580,-107.850,-5.598)
O4': (66.951,-114.614,-6.365)
C8: (66.469,-111.989,-5.571)
C2: (70.020,-109.958,-7.080)
C6: (68.098,-108.898,-5.991)
C5: (67.597,-110.218,-5.908)
C4: (68.358,-111.247,-6.414)
P: (63.901,-114.285,-3.381)
C4': (67.133,-115.503,-5.228)
C2': (69.104,-114.197,-5.462)
O2': (70.010,-115.118,-6.050)
N1: (69.341,-108.863,-6.604)
N2: (71.215,-109.726,-7.644)
N3: (69.566,-111.190,-7.008)
N7: (66.406,-110.699,-5.381)
N9: (67.635,-112.388,-6.178)
O5': (65.267,-114.406,-4.185)
O3': (68.924,-115.668,-3.504)
OP2: (63.802,-112.930,-2.778)
C3': (68.210,-114.811,-4.394)
C1': (68.065,-113.749,-6.485)
C5': (65.788,-115.678,-4.561)
O6: (67.580,-107.850,-5.598)
O4': (66.951,-114.614,-6.365)
C8: (66.469,-111.989,-5.571)
C2: (70.020,-109.958,-7.080)
C6: (68.098,-108.898,-5.991)
C5: (67.597,-110.218,-5.908)
C4: (68.358,-111.247,-6.414)
P: (63.901,-114.285,-3.381)
C4': (67.133,-115.503,-5.228)
C2': (69.104,-114.197,-5.462)
O2': (70.010,-115.118,-6.050)
N1: (69.341,-108.863,-6.604)
N2: (71.215,-109.726,-7.644)
N3: (69.566,-111.190,-7.008)
N7: (66.406,-110.699,-5.381)
N9: (67.635,-112.388,-6.178)
O5': (65.267,-114.406,-4.185)
O3': (68.924,-115.668,-3.504)
OP1: (78.195,-109.895,-16.321)
OP2: (79.658,-111.529,-14.977)
C3': (75.806,-109.906,-11.718)
C1': (75.112,-112.095,-11.098)
C5': (76.038,-110.510,-14.246)
O6: (78.560,-115.340,-7.422)
O4': (75.308,-112.060,-12.499)
C8: (77.353,-113.307,-11.014)
C2: (75.353,-113.811,-7.161)
C6: (77.558,-114.696,-7.776)
C5: (77.301,-114.071,-9.030)
C4: (76.107,-113.404,-9.206)
P: (78.314,-111.053,-15.398)
C4': (75.318,-110.677,-12.930)
C2': (75.132,-110.656,-10.574)
O2': (73.802,-110.217,-10.387)
N1: (76.504,-114.512,-6.887)
N2: (74.462,-113.720,-6.157)
N3: (75.097,-113.235,-8.327)
N7: (78.077,-113.999,-10.178)
N9: (76.150,-112.907,-10.479)
O5': (77.435,-110.746,-14.108)
O3': (75.340,-108.573,-11.763)
OP2: (79.658,-111.529,-14.977)
C3': (75.806,-109.906,-11.718)
C1': (75.112,-112.095,-11.098)
C5': (76.038,-110.510,-14.246)
O6: (78.560,-115.340,-7.422)
O4': (75.308,-112.060,-12.499)
C8: (77.353,-113.307,-11.014)
C2: (75.353,-113.811,-7.161)
C6: (77.558,-114.696,-7.776)
C5: (77.301,-114.071,-9.030)
C4: (76.107,-113.404,-9.206)
P: (78.314,-111.053,-15.398)
C4': (75.318,-110.677,-12.930)
C2': (75.132,-110.656,-10.574)
O2': (73.802,-110.217,-10.387)
N1: (76.504,-114.512,-6.887)
N2: (74.462,-113.720,-6.157)
N3: (75.097,-113.235,-8.327)
N7: (78.077,-113.999,-10.178)
N9: (76.150,-112.907,-10.479)
O5': (77.435,-110.746,-14.108)
O3': (75.340,-108.573,-11.763)
Image (generated by PyMOL):