ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:12716:12717

Extra

PDB:
ATOM 1 O3' C A2715 1.862 -15.739 75.698 1.00 41.36 O
ATOM 2 P G A2716 1.449 -16.461 77.053 1.00 49.07 P
ATOM 3 OP1 G A2716 1.192 -17.863 76.732 1.00 49.15 O
ATOM 4 OP2 G A2716 0.374 -15.641 77.680 1.00 49.27 O
ATOM 5 O5' G A2716 2.743 -16.355 77.924 1.00 48.88 O
ATOM 6 C5' G A2716 3.846 -17.183 77.672 1.00 48.71 C
ATOM 7 C4' G A2716 4.992 -16.808 78.538 1.00 48.55 C
ATOM 8 O4' G A2716 5.315 -15.406 78.370 1.00 48.45 O
ATOM 9 C3' G A2716 4.762 -16.913 80.011 1.00 48.68 C
ATOM 10 O3' G A2716 4.684 -18.251 80.461 1.00 48.77 O
ATOM 11 C2' G A2716 5.947 -16.104 80.544 1.00 48.50 C
ATOM 12 O2' G A2716 7.181 -16.817 80.406 1.00 48.33 O
ATOM 13 C1' G A2716 5.966 -14.945 79.541 1.00 48.41 C
ATOM 14 N9 G A2716 5.242 -13.804 80.068 1.00 48.53 N
ATOM 15 C8 G A2716 3.965 -13.500 79.784 1.00 48.72 C
ATOM 16 N7 G A2716 3.550 -12.484 80.469 1.00 48.82 N
ATOM 17 C5 G A2716 4.618 -12.140 81.257 1.00 48.70 C
ATOM 18 C6 G A2716 4.711 -11.121 82.206 1.00 48.75 C
ATOM 19 O6 G A2716 3.852 -10.308 82.516 1.00 48.92 O
ATOM 20 N1 G A2716 5.966 -11.084 82.804 1.00 48.60 N
ATOM 21 C2 G A2716 7.014 -11.938 82.503 1.00 48.42 C
ATOM 22 N2 G A2716 8.188 -11.732 83.176 1.00 48.30 N
ATOM 23 N3 G A2716 6.883 -12.919 81.584 1.00 48.37 N
ATOM 24 C4 G A2716 5.666 -12.957 81.025 1.00 48.52 C
ATOM 25 P U A2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 26 OP1 U A2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 27 OP2 U A2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 28 O5' U A2717 3.605 -17.836 82.654 1.00 43.39 O
TER

ATOM 1 O3' G B2716 4.684 -18.251 80.461 1.00 48.77 O
ATOM 2 P U B2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 3 OP1 U B2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 4 OP2 U B2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 5 O5' U B2717 3.605 -17.836 82.654 1.00 43.39 O
ATOM 6 C5' U B2717 2.678 -17.899 83.711 1.00 43.63 C
ATOM 7 C4' U B2717 3.360 -17.890 85.053 1.00 43.64 C
ATOM 8 O4' U B2717 4.119 -19.100 85.223 1.00 43.58 O
ATOM 9 C3' U B2717 4.365 -16.787 85.307 1.00 43.46 C
ATOM 10 O3' U B2717 3.756 -15.578 85.665 1.00 43.56 O
ATOM 11 C2' U B2717 5.196 -17.369 86.430 1.00 43.46 C
ATOM 12 O2' U B2717 4.521 -17.219 87.657 1.00 43.69 O
ATOM 13 C1' U B2717 5.209 -18.855 86.072 1.00 43.48 C
ATOM 14 N1 U B2717 6.421 -19.222 85.361 1.00 43.25 N
ATOM 15 C2 U B2717 7.560 -19.474 86.108 1.00 43.17 C
ATOM 16 O2 U B2717 7.598 -19.419 87.323 1.00 43.29 O
ATOM 17 N3 U B2717 8.649 -19.791 85.361 1.00 42.96 N
ATOM 18 C4 U B2717 8.641 -19.877 84.000 1.00 42.84 C
ATOM 19 O4 U B2717 9.669 -20.186 83.445 1.00 42.67 O
ATOM 20 C5 U B2717 7.428 -19.605 83.322 1.00 42.94 C
ATOM 21 C6 U B2717 6.366 -19.291 84.002 1.00 43.14 C
ATOM 22 P G B2718 4.187 -14.219 84.954 1.00 39.06 P
ATOM 23 OP1 G B2718 3.272 -13.173 85.444 1.00 39.25 O
ATOM 24 OP2 G B2718 4.258 -14.483 83.510 1.00 38.93 O
ATOM 25 O5' G B2718 5.624 -13.961 85.521 1.00 38.89 O
TER

Atoms:
OP1: (1.192,-17.863,76.732)
OP2: (0.374,-15.641,77.680)
C3': (4.762,-16.913,80.011)
C1': (5.966,-14.945,79.541)
C5': (3.846,-17.183,77.672)
O6: (3.852,-10.308,82.516)
O4': (5.315,-15.406,78.370)
C8: (3.965,-13.500,79.784)
C2: (7.014,-11.938,82.503)
C6: (4.711,-11.121,82.206)
C5: (4.618,-12.140,81.257)
C4: (5.666,-12.957,81.025)
P: (1.449,-16.461,77.053)
C4': (4.992,-16.808,78.538)
C2': (5.947,-16.104,80.544)
O2': (7.181,-16.817,80.406)
N1: (5.966,-11.084,82.804)
N2: (8.188,-11.732,83.176)
N3: (6.883,-12.919,81.584)
N7: (3.550,-12.484,80.469)
N9: (5.242,-13.804,80.068)
O5': (2.743,-16.355,77.924)
O3': (4.684,-18.251,80.461)
C4: (8.641,-19.877,84.000)
N3: (8.649,-19.791,85.361)
OP1: (3.653,-20.176,81.697)
OP2: (2.177,-18.344,80.635)
C2: (7.560,-19.474,86.108)
C1': (5.209,-18.855,86.072)
C3': (4.365,-16.787,85.307)
O5': (3.605,-17.836,82.654)
O4': (4.119,-19.100,85.223)
C5': (2.678,-17.899,83.711)
P: (3.430,-18.733,81.355)
C4': (3.360,-17.890,85.053)
C2': (5.196,-17.369,86.430)
O2': (4.521,-17.219,87.657)
N1: (6.421,-19.222,85.361)
O4: (9.669,-20.186,83.445)
O2: (7.598,-19.419,87.323)
C6: (6.366,-19.291,84.002)
C5: (7.428,-19.605,83.322)
O3': (3.756,-15.578,85.665)
Image (generated by PyMOL):
PyMOL image
show in jmol