Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P108:P109
Extra
PDB:
ATOM 1 O3' G A 107 -10.819 -11.948 28.152 1.00 51.87 O
ATOM 2 P G A 108 -10.784 -10.512 27.445 1.00 51.97 P
ATOM 3 OP1 G A 108 -9.957 -9.620 28.289 1.00 52.43 O
ATOM 4 OP2 G A 108 -12.170 -10.133 27.085 1.00 51.64 O
ATOM 5 O5' G A 108 -10.005 -10.797 26.080 1.00 51.68 O
ATOM 6 C5' G A 108 -8.682 -11.343 26.079 1.00 51.04 C
ATOM 7 C4' G A 108 -8.235 -11.611 24.655 1.00 50.55 C
ATOM 8 O4' G A 108 -8.978 -12.730 24.105 1.00 50.18 O
ATOM 9 C3' G A 108 -8.538 -10.493 23.669 1.00 50.26 C
ATOM 10 O3' G A 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 11 C2' G A 108 -8.417 -11.244 22.349 1.00 49.84 C
ATOM 12 O2' G A 108 -7.079 -11.468 21.949 1.00 49.76 O
ATOM 13 C1' G A 108 -9.120 -12.557 22.703 1.00 49.56 C
ATOM 14 N9 G A 108 -10.533 -12.514 22.318 1.00 48.88 N
ATOM 15 C8 G A 108 -11.611 -12.138 23.087 1.00 48.52 C
ATOM 16 N7 G A 108 -12.751 -12.184 22.453 1.00 48.06 N
ATOM 17 C5 G A 108 -12.413 -12.609 21.175 1.00 48.19 C
ATOM 18 C6 G A 108 -13.227 -12.845 20.035 1.00 48.22 C
ATOM 19 O6 G A 108 -14.457 -12.725 19.924 1.00 48.51 O
ATOM 20 N1 G A 108 -12.484 -13.271 18.936 1.00 47.98 N
ATOM 21 C2 G A 108 -11.121 -13.449 18.937 1.00 48.13 C
ATOM 22 N2 G A 108 -10.577 -13.865 17.787 1.00 48.05 N
ATOM 23 N3 G A 108 -10.345 -13.231 19.994 1.00 48.46 N
ATOM 24 C4 G A 108 -11.052 -12.815 21.077 1.00 48.47 C
ATOM 25 P U A 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 26 OP1 U A 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 27 OP2 U A 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 28 O5' U A 109 -8.635 -7.749 22.215 1.00 51.42 O
TER
ATOM 1 O3' G B 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 2 P U B 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 3 OP1 U B 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 4 OP2 U B 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 5 O5' U B 109 -8.635 -7.749 22.215 1.00 51.42 O
ATOM 6 C5' U B 109 -9.537 -6.732 21.806 1.00 52.02 C
ATOM 7 C4' U B 109 -9.369 -6.454 20.322 1.00 52.49 C
ATOM 8 O4' U B 109 -7.981 -6.128 20.068 1.00 52.85 O
ATOM 9 C3' U B 109 -9.672 -7.632 19.409 1.00 52.57 C
ATOM 10 O3' U B 109 -11.046 -7.630 19.028 1.00 52.83 O
ATOM 11 C2' U B 109 -8.751 -7.402 18.214 1.00 52.66 C
ATOM 12 O2' U B 109 -9.338 -6.604 17.206 1.00 52.47 O
ATOM 13 C1' U B 109 -7.560 -6.667 18.827 1.00 52.67 C
ATOM 14 N1 U B 109 -6.318 -7.500 19.031 1.00 52.73 N
ATOM 15 C2 U B 109 -5.584 -7.923 17.931 1.00 53.00 C
ATOM 16 O2 U B 109 -5.886 -7.671 16.777 1.00 53.44 O
ATOM 17 N3 U B 109 -4.464 -8.668 18.230 1.00 53.07 N
ATOM 18 C4 U B 109 -4.009 -9.024 19.491 1.00 53.13 C
ATOM 19 O4 U B 109 -2.987 -9.694 19.604 1.00 53.22 O
ATOM 20 C5 U B 109 -4.820 -8.548 20.587 1.00 52.97 C
ATOM 21 C6 U B 109 -5.915 -7.821 20.319 1.00 52.78 C
ATOM 22 P G B 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 23 OP1 G B 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 24 OP2 G B 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 25 O5' G B 110 -11.276 -9.805 17.800 1.00 52.05 O
TER
ATOM 2 P G A 108 -10.784 -10.512 27.445 1.00 51.97 P
ATOM 3 OP1 G A 108 -9.957 -9.620 28.289 1.00 52.43 O
ATOM 4 OP2 G A 108 -12.170 -10.133 27.085 1.00 51.64 O
ATOM 5 O5' G A 108 -10.005 -10.797 26.080 1.00 51.68 O
ATOM 6 C5' G A 108 -8.682 -11.343 26.079 1.00 51.04 C
ATOM 7 C4' G A 108 -8.235 -11.611 24.655 1.00 50.55 C
ATOM 8 O4' G A 108 -8.978 -12.730 24.105 1.00 50.18 O
ATOM 9 C3' G A 108 -8.538 -10.493 23.669 1.00 50.26 C
ATOM 10 O3' G A 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 11 C2' G A 108 -8.417 -11.244 22.349 1.00 49.84 C
ATOM 12 O2' G A 108 -7.079 -11.468 21.949 1.00 49.76 O
ATOM 13 C1' G A 108 -9.120 -12.557 22.703 1.00 49.56 C
ATOM 14 N9 G A 108 -10.533 -12.514 22.318 1.00 48.88 N
ATOM 15 C8 G A 108 -11.611 -12.138 23.087 1.00 48.52 C
ATOM 16 N7 G A 108 -12.751 -12.184 22.453 1.00 48.06 N
ATOM 17 C5 G A 108 -12.413 -12.609 21.175 1.00 48.19 C
ATOM 18 C6 G A 108 -13.227 -12.845 20.035 1.00 48.22 C
ATOM 19 O6 G A 108 -14.457 -12.725 19.924 1.00 48.51 O
ATOM 20 N1 G A 108 -12.484 -13.271 18.936 1.00 47.98 N
ATOM 21 C2 G A 108 -11.121 -13.449 18.937 1.00 48.13 C
ATOM 22 N2 G A 108 -10.577 -13.865 17.787 1.00 48.05 N
ATOM 23 N3 G A 108 -10.345 -13.231 19.994 1.00 48.46 N
ATOM 24 C4 G A 108 -11.052 -12.815 21.077 1.00 48.47 C
ATOM 25 P U A 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 26 OP1 U A 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 27 OP2 U A 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 28 O5' U A 109 -8.635 -7.749 22.215 1.00 51.42 O
TER
ATOM 1 O3' G B 108 -7.629 -9.405 23.800 1.00 50.72 O
ATOM 2 P U B 109 -8.178 -7.897 23.739 1.00 51.22 P
ATOM 3 OP1 U B 109 -7.026 -7.001 23.979 1.00 51.53 O
ATOM 4 OP2 U B 109 -9.383 -7.790 24.592 1.00 51.55 O
ATOM 5 O5' U B 109 -8.635 -7.749 22.215 1.00 51.42 O
ATOM 6 C5' U B 109 -9.537 -6.732 21.806 1.00 52.02 C
ATOM 7 C4' U B 109 -9.369 -6.454 20.322 1.00 52.49 C
ATOM 8 O4' U B 109 -7.981 -6.128 20.068 1.00 52.85 O
ATOM 9 C3' U B 109 -9.672 -7.632 19.409 1.00 52.57 C
ATOM 10 O3' U B 109 -11.046 -7.630 19.028 1.00 52.83 O
ATOM 11 C2' U B 109 -8.751 -7.402 18.214 1.00 52.66 C
ATOM 12 O2' U B 109 -9.338 -6.604 17.206 1.00 52.47 O
ATOM 13 C1' U B 109 -7.560 -6.667 18.827 1.00 52.67 C
ATOM 14 N1 U B 109 -6.318 -7.500 19.031 1.00 52.73 N
ATOM 15 C2 U B 109 -5.584 -7.923 17.931 1.00 53.00 C
ATOM 16 O2 U B 109 -5.886 -7.671 16.777 1.00 53.44 O
ATOM 17 N3 U B 109 -4.464 -8.668 18.230 1.00 53.07 N
ATOM 18 C4 U B 109 -4.009 -9.024 19.491 1.00 53.13 C
ATOM 19 O4 U B 109 -2.987 -9.694 19.604 1.00 53.22 O
ATOM 20 C5 U B 109 -4.820 -8.548 20.587 1.00 52.97 C
ATOM 21 C6 U B 109 -5.915 -7.821 20.319 1.00 52.78 C
ATOM 22 P G B 110 -11.886 -8.994 19.038 1.00 52.78 P
ATOM 23 OP1 G B 110 -13.300 -8.657 18.749 1.00 53.02 O
ATOM 24 OP2 G B 110 -11.549 -9.726 20.279 1.00 52.61 O
ATOM 25 O5' G B 110 -11.276 -9.805 17.800 1.00 52.05 O
TER
Atoms:
OP1: (-9.957,-9.620,28.289)
OP2: (-12.170,-10.133,27.085)
C3': (-8.538,-10.493,23.669)
C1': (-9.120,-12.557,22.703)
C5': (-8.682,-11.343,26.079)
O6: (-14.457,-12.725,19.924)
O4': (-8.978,-12.730,24.105)
C8: (-11.611,-12.138,23.087)
C2: (-11.121,-13.449,18.937)
C6: (-13.227,-12.845,20.035)
C5: (-12.413,-12.609,21.175)
C4: (-11.052,-12.815,21.077)
P: (-10.784,-10.512,27.445)
C4': (-8.235,-11.611,24.655)
C2': (-8.417,-11.244,22.349)
O2': (-7.079,-11.468,21.949)
N1: (-12.484,-13.271,18.936)
N2: (-10.577,-13.865,17.787)
N3: (-10.345,-13.231,19.994)
N7: (-12.751,-12.184,22.453)
N9: (-10.533,-12.514,22.318)
O5': (-10.005,-10.797,26.080)
O3': (-7.629,-9.405,23.800)
OP2: (-12.170,-10.133,27.085)
C3': (-8.538,-10.493,23.669)
C1': (-9.120,-12.557,22.703)
C5': (-8.682,-11.343,26.079)
O6: (-14.457,-12.725,19.924)
O4': (-8.978,-12.730,24.105)
C8: (-11.611,-12.138,23.087)
C2: (-11.121,-13.449,18.937)
C6: (-13.227,-12.845,20.035)
C5: (-12.413,-12.609,21.175)
C4: (-11.052,-12.815,21.077)
P: (-10.784,-10.512,27.445)
C4': (-8.235,-11.611,24.655)
C2': (-8.417,-11.244,22.349)
O2': (-7.079,-11.468,21.949)
N1: (-12.484,-13.271,18.936)
N2: (-10.577,-13.865,17.787)
N3: (-10.345,-13.231,19.994)
N7: (-12.751,-12.184,22.453)
N9: (-10.533,-12.514,22.318)
O5': (-10.005,-10.797,26.080)
O3': (-7.629,-9.405,23.800)
C4: (-4.009,-9.024,19.491)
N3: (-4.464,-8.668,18.230)
OP1: (-7.026,-7.001,23.979)
OP2: (-9.383,-7.790,24.592)
C2: (-5.584,-7.923,17.931)
C1': (-7.560,-6.667,18.827)
C3': (-9.672,-7.632,19.409)
O5': (-8.635,-7.749,22.215)
O4': (-7.981,-6.128,20.068)
C5': (-9.537,-6.732,21.806)
P: (-8.178,-7.897,23.739)
C4': (-9.369,-6.454,20.322)
C2': (-8.751,-7.402,18.214)
O2': (-9.338,-6.604,17.206)
N1: (-6.318,-7.500,19.031)
O4: (-2.987,-9.694,19.604)
O2: (-5.886,-7.671,16.777)
C6: (-5.915,-7.821,20.319)
C5: (-4.820,-8.548,20.587)
O3': (-11.046,-7.630,19.028)
N3: (-4.464,-8.668,18.230)
OP1: (-7.026,-7.001,23.979)
OP2: (-9.383,-7.790,24.592)
C2: (-5.584,-7.923,17.931)
C1': (-7.560,-6.667,18.827)
C3': (-9.672,-7.632,19.409)
O5': (-8.635,-7.749,22.215)
O4': (-7.981,-6.128,20.068)
C5': (-9.537,-6.732,21.806)
P: (-8.178,-7.897,23.739)
C4': (-9.369,-6.454,20.322)
C2': (-8.751,-7.402,18.214)
O2': (-9.338,-6.604,17.206)
N1: (-6.318,-7.500,19.031)
O4: (-2.987,-9.694,19.604)
O2: (-5.886,-7.671,16.777)
C6: (-5.915,-7.821,20.319)
C5: (-4.820,-8.548,20.587)
O3': (-11.046,-7.630,19.028)
Image (generated by PyMOL):