Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NYI:B10:B11
Extra
PDB:
ATOM 1 O3' C A 9 36.631 3.472 11.913 1.00 42.44 O
ATOM 2 P G A 10 36.266 3.418 10.356 1.00 42.64 P
ATOM 3 OP1 G A 10 37.298 4.192 9.637 1.00 42.23 O
ATOM 4 OP2 G A 10 34.826 3.728 10.207 1.00 41.59 O
ATOM 5 O5' G A 10 36.503 1.878 10.059 1.00 41.59 O
ATOM 6 C5' G A 10 37.821 1.409 10.187 1.00 40.64 C
ATOM 7 C4' G A 10 37.780 -0.096 10.285 1.00 41.10 C
ATOM 8 O4' G A 10 37.056 -0.587 11.447 1.00 41.16 O
ATOM 9 C3' G A 10 37.079 -0.793 9.142 1.00 40.76 C
ATOM 10 O3' G A 10 37.905 -0.635 8.030 1.00 42.78 O
ATOM 11 C2' G A 10 37.161 -2.192 9.736 1.00 40.22 C
ATOM 12 O2' G A 10 38.469 -2.758 9.599 1.00 39.65 O
ATOM 13 C1' G A 10 36.709 -1.936 11.195 1.00 39.37 C
ATOM 14 N9 G A 10 35.255 -2.120 11.243 1.00 37.67 N
ATOM 15 C8 G A 10 34.277 -1.149 11.140 1.00 36.86 C
ATOM 16 N7 G A 10 33.063 -1.626 11.160 1.00 35.94 N
ATOM 17 C5 G A 10 33.251 -3.002 11.278 1.00 36.19 C
ATOM 18 C6 G A 10 32.306 -4.052 11.343 1.00 36.27 C
ATOM 19 O6 G A 10 31.076 -3.926 11.314 1.00 37.61 O
ATOM 20 N1 G A 10 32.886 -5.320 11.463 1.00 35.33 N
ATOM 21 C2 G A 10 34.250 -5.544 11.517 1.00 36.78 C
ATOM 22 N2 G A 10 34.693 -6.822 11.631 1.00 35.20 N
ATOM 23 N3 G A 10 35.140 -4.553 11.459 1.00 37.15 N
ATOM 24 C4 G A 10 34.583 -3.321 11.327 1.00 36.41 C
ATOM 25 P U A 11 37.424 -0.237 6.561 1.00 44.49 P
ATOM 26 OP1 U A 11 38.625 -0.557 5.749 1.00 45.29 O
ATOM 27 OP2 U A 11 36.829 1.124 6.569 1.00 43.36 O
ATOM 28 O5' U A 11 36.291 -1.309 6.183 1.00 44.47 O
TER
ATOM 1 O3' G B 10 37.905 -0.635 8.030 1.00 42.78 O
ATOM 2 P U B 11 37.424 -0.237 6.561 1.00 44.49 P
ATOM 3 OP1 U B 11 38.625 -0.557 5.749 1.00 45.29 O
ATOM 4 OP2 U B 11 36.829 1.124 6.569 1.00 43.36 O
ATOM 5 O5' U B 11 36.291 -1.309 6.183 1.00 44.47 O
ATOM 6 C5' U B 11 35.255 -1.022 5.234 1.00 43.09 C
ATOM 7 C4' U B 11 34.849 -2.295 4.511 1.00 42.84 C
ATOM 8 O4' U B 11 35.935 -2.688 3.647 1.00 43.38 O
ATOM 9 C3' U B 11 34.652 -3.475 5.434 1.00 43.61 C
ATOM 10 O3' U B 11 33.286 -3.585 5.816 1.00 44.78 O
ATOM 11 C2' U B 11 35.156 -4.689 4.665 1.00 43.33 C
ATOM 12 O2' U B 11 34.164 -5.409 3.960 1.00 45.26 O
ATOM 13 C1' U B 11 36.152 -4.081 3.693 1.00 41.71 C
ATOM 14 N1 U B 11 37.532 -4.358 4.116 1.00 38.98 N
ATOM 15 C2 U B 11 37.996 -5.659 3.947 1.00 38.73 C
ATOM 16 O2 U B 11 37.284 -6.525 3.459 1.00 39.94 O
ATOM 17 N3 U B 11 39.293 -5.907 4.368 1.00 35.44 N
ATOM 18 C4 U B 11 40.127 -4.947 4.916 1.00 34.28 C
ATOM 19 O4 U B 11 41.251 -5.258 5.241 1.00 31.74 O
ATOM 20 C5 U B 11 39.568 -3.612 5.066 1.00 36.12 C
ATOM 21 C6 U B 11 38.309 -3.362 4.679 1.00 36.94 C
ATOM 22 P A B 12 32.954 -3.947 7.350 1.00 44.49 P
ATOM 23 OP1 A B 12 31.480 -3.842 7.495 1.00 43.92 O
ATOM 24 OP2 A B 12 33.845 -3.140 8.225 1.00 43.87 O
ATOM 25 O5' A B 12 33.430 -5.476 7.453 1.00 41.33 O
TER
ATOM 2 P G A 10 36.266 3.418 10.356 1.00 42.64 P
ATOM 3 OP1 G A 10 37.298 4.192 9.637 1.00 42.23 O
ATOM 4 OP2 G A 10 34.826 3.728 10.207 1.00 41.59 O
ATOM 5 O5' G A 10 36.503 1.878 10.059 1.00 41.59 O
ATOM 6 C5' G A 10 37.821 1.409 10.187 1.00 40.64 C
ATOM 7 C4' G A 10 37.780 -0.096 10.285 1.00 41.10 C
ATOM 8 O4' G A 10 37.056 -0.587 11.447 1.00 41.16 O
ATOM 9 C3' G A 10 37.079 -0.793 9.142 1.00 40.76 C
ATOM 10 O3' G A 10 37.905 -0.635 8.030 1.00 42.78 O
ATOM 11 C2' G A 10 37.161 -2.192 9.736 1.00 40.22 C
ATOM 12 O2' G A 10 38.469 -2.758 9.599 1.00 39.65 O
ATOM 13 C1' G A 10 36.709 -1.936 11.195 1.00 39.37 C
ATOM 14 N9 G A 10 35.255 -2.120 11.243 1.00 37.67 N
ATOM 15 C8 G A 10 34.277 -1.149 11.140 1.00 36.86 C
ATOM 16 N7 G A 10 33.063 -1.626 11.160 1.00 35.94 N
ATOM 17 C5 G A 10 33.251 -3.002 11.278 1.00 36.19 C
ATOM 18 C6 G A 10 32.306 -4.052 11.343 1.00 36.27 C
ATOM 19 O6 G A 10 31.076 -3.926 11.314 1.00 37.61 O
ATOM 20 N1 G A 10 32.886 -5.320 11.463 1.00 35.33 N
ATOM 21 C2 G A 10 34.250 -5.544 11.517 1.00 36.78 C
ATOM 22 N2 G A 10 34.693 -6.822 11.631 1.00 35.20 N
ATOM 23 N3 G A 10 35.140 -4.553 11.459 1.00 37.15 N
ATOM 24 C4 G A 10 34.583 -3.321 11.327 1.00 36.41 C
ATOM 25 P U A 11 37.424 -0.237 6.561 1.00 44.49 P
ATOM 26 OP1 U A 11 38.625 -0.557 5.749 1.00 45.29 O
ATOM 27 OP2 U A 11 36.829 1.124 6.569 1.00 43.36 O
ATOM 28 O5' U A 11 36.291 -1.309 6.183 1.00 44.47 O
TER
ATOM 1 O3' G B 10 37.905 -0.635 8.030 1.00 42.78 O
ATOM 2 P U B 11 37.424 -0.237 6.561 1.00 44.49 P
ATOM 3 OP1 U B 11 38.625 -0.557 5.749 1.00 45.29 O
ATOM 4 OP2 U B 11 36.829 1.124 6.569 1.00 43.36 O
ATOM 5 O5' U B 11 36.291 -1.309 6.183 1.00 44.47 O
ATOM 6 C5' U B 11 35.255 -1.022 5.234 1.00 43.09 C
ATOM 7 C4' U B 11 34.849 -2.295 4.511 1.00 42.84 C
ATOM 8 O4' U B 11 35.935 -2.688 3.647 1.00 43.38 O
ATOM 9 C3' U B 11 34.652 -3.475 5.434 1.00 43.61 C
ATOM 10 O3' U B 11 33.286 -3.585 5.816 1.00 44.78 O
ATOM 11 C2' U B 11 35.156 -4.689 4.665 1.00 43.33 C
ATOM 12 O2' U B 11 34.164 -5.409 3.960 1.00 45.26 O
ATOM 13 C1' U B 11 36.152 -4.081 3.693 1.00 41.71 C
ATOM 14 N1 U B 11 37.532 -4.358 4.116 1.00 38.98 N
ATOM 15 C2 U B 11 37.996 -5.659 3.947 1.00 38.73 C
ATOM 16 O2 U B 11 37.284 -6.525 3.459 1.00 39.94 O
ATOM 17 N3 U B 11 39.293 -5.907 4.368 1.00 35.44 N
ATOM 18 C4 U B 11 40.127 -4.947 4.916 1.00 34.28 C
ATOM 19 O4 U B 11 41.251 -5.258 5.241 1.00 31.74 O
ATOM 20 C5 U B 11 39.568 -3.612 5.066 1.00 36.12 C
ATOM 21 C6 U B 11 38.309 -3.362 4.679 1.00 36.94 C
ATOM 22 P A B 12 32.954 -3.947 7.350 1.00 44.49 P
ATOM 23 OP1 A B 12 31.480 -3.842 7.495 1.00 43.92 O
ATOM 24 OP2 A B 12 33.845 -3.140 8.225 1.00 43.87 O
ATOM 25 O5' A B 12 33.430 -5.476 7.453 1.00 41.33 O
TER
Atoms:
OP1: (37.298,4.192,9.637)
OP2: (34.826,3.728,10.207)
C3': (37.079,-0.793,9.142)
C1': (36.709,-1.936,11.195)
C5': (37.821,1.409,10.187)
O6: (31.076,-3.926,11.314)
O4': (37.056,-0.587,11.447)
C8: (34.277,-1.149,11.140)
C2: (34.250,-5.544,11.517)
C6: (32.306,-4.052,11.343)
C5: (33.251,-3.002,11.278)
C4: (34.583,-3.321,11.327)
P: (36.266,3.418,10.356)
C4': (37.780,-0.096,10.285)
C2': (37.161,-2.192,9.736)
O2': (38.469,-2.758,9.599)
N1: (32.886,-5.320,11.463)
N2: (34.693,-6.822,11.631)
N3: (35.140,-4.553,11.459)
N7: (33.063,-1.626,11.160)
N9: (35.255,-2.120,11.243)
O5': (36.503,1.878,10.059)
O3': (37.905,-0.635,8.030)
OP2: (34.826,3.728,10.207)
C3': (37.079,-0.793,9.142)
C1': (36.709,-1.936,11.195)
C5': (37.821,1.409,10.187)
O6: (31.076,-3.926,11.314)
O4': (37.056,-0.587,11.447)
C8: (34.277,-1.149,11.140)
C2: (34.250,-5.544,11.517)
C6: (32.306,-4.052,11.343)
C5: (33.251,-3.002,11.278)
C4: (34.583,-3.321,11.327)
P: (36.266,3.418,10.356)
C4': (37.780,-0.096,10.285)
C2': (37.161,-2.192,9.736)
O2': (38.469,-2.758,9.599)
N1: (32.886,-5.320,11.463)
N2: (34.693,-6.822,11.631)
N3: (35.140,-4.553,11.459)
N7: (33.063,-1.626,11.160)
N9: (35.255,-2.120,11.243)
O5': (36.503,1.878,10.059)
O3': (37.905,-0.635,8.030)
C4: (40.127,-4.947,4.916)
N3: (39.293,-5.907,4.368)
OP1: (38.625,-0.557,5.749)
OP2: (36.829,1.124,6.569)
C2: (37.996,-5.659,3.947)
C1': (36.152,-4.081,3.693)
C3': (34.652,-3.475,5.434)
O5': (36.291,-1.309,6.183)
O4': (35.935,-2.688,3.647)
C5': (35.255,-1.022,5.234)
P: (37.424,-0.237,6.561)
C4': (34.849,-2.295,4.511)
C2': (35.156,-4.689,4.665)
O2': (34.164,-5.409,3.960)
N1: (37.532,-4.358,4.116)
O4: (41.251,-5.258,5.241)
O2: (37.284,-6.525,3.459)
C6: (38.309,-3.362,4.679)
C5: (39.568,-3.612,5.066)
O3': (33.286,-3.585,5.816)
N3: (39.293,-5.907,4.368)
OP1: (38.625,-0.557,5.749)
OP2: (36.829,1.124,6.569)
C2: (37.996,-5.659,3.947)
C1': (36.152,-4.081,3.693)
C3': (34.652,-3.475,5.434)
O5': (36.291,-1.309,6.183)
O4': (35.935,-2.688,3.647)
C5': (35.255,-1.022,5.234)
P: (37.424,-0.237,6.561)
C4': (34.849,-2.295,4.511)
C2': (35.156,-4.689,4.665)
O2': (34.164,-5.409,3.960)
N1: (37.532,-4.358,4.116)
O4: (41.251,-5.258,5.241)
O2: (37.284,-6.525,3.459)
C6: (38.309,-3.362,4.679)
C5: (39.568,-3.612,5.066)
O3': (33.286,-3.585,5.816)
Image (generated by PyMOL):