ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 299D:B11:B12

Extra

PDB:
ATOM 1 O3' C A 10 35.970 3.879 12.048 1.00 33.64 O
ATOM 2 P G A 11 35.786 3.606 10.483 1.00 36.88 P
ATOM 3 OP1 G A 11 36.896 4.350 9.823 1.00 36.23 O
ATOM 4 OP2 G A 11 34.369 3.827 10.060 1.00 32.85 O
ATOM 5 O5' G A 11 36.004 2.043 10.350 1.00 34.41 O
ATOM 6 C5' G A 11 37.179 1.442 10.839 1.00 31.83 C
ATOM 7 C4' G A 11 37.128 -0.031 10.583 1.00 29.42 C
ATOM 8 O4' G A 11 36.249 -0.682 11.535 1.00 27.48 O
ATOM 9 C3' G A 11 36.504 -0.412 9.258 1.00 26.81 C
ATOM 10 O3' G A 11 37.447 -0.235 8.207 1.00 29.66 O
ATOM 11 C2' G A 11 36.229 -1.889 9.492 1.00 26.05 C
ATOM 12 O2' G A 11 37.420 -2.638 9.327 1.00 24.67 O
ATOM 13 C1' G A 11 35.805 -1.898 10.968 1.00 25.11 C
ATOM 14 N9 G A 11 34.358 -1.975 11.066 1.00 21.67 N
ATOM 15 C8 G A 11 33.463 -0.939 11.062 1.00 25.66 C
ATOM 16 N7 G A 11 32.222 -1.338 11.129 1.00 25.92 N
ATOM 17 C5 G A 11 32.312 -2.721 11.186 1.00 24.94 C
ATOM 18 C6 G A 11 31.297 -3.705 11.236 1.00 28.16 C
ATOM 19 O6 G A 11 30.076 -3.544 11.258 1.00 39.76 O
ATOM 20 N1 G A 11 31.825 -4.993 11.259 1.00 26.12 N
ATOM 21 C2 G A 11 33.162 -5.295 11.238 1.00 24.91 C
ATOM 22 N2 G A 11 33.478 -6.603 11.265 1.00 15.01 N
ATOM 23 N3 G A 11 34.123 -4.381 11.190 1.00 25.75 N
ATOM 24 C4 G A 11 33.625 -3.125 11.163 1.00 23.68 C
ATOM 25 P U A 12 36.932 -0.098 6.689 1.00 29.47 P
ATOM 26 OP1 U A 12 37.952 -0.691 5.788 1.00 26.53 O
ATOM 27 OP2 U A 12 36.507 1.312 6.493 1.00 30.39 O
ATOM 28 O5' U A 12 35.646 -1.025 6.622 1.00 20.10 O
TER

ATOM 1 O3' G B 11 37.447 -0.235 8.207 1.00 29.66 O
ATOM 2 P U B 12 36.932 -0.098 6.689 1.00 29.47 P
ATOM 3 OP1 U B 12 37.952 -0.691 5.788 1.00 26.53 O
ATOM 4 OP2 U B 12 36.507 1.312 6.493 1.00 30.39 O
ATOM 5 O5' U B 12 35.646 -1.025 6.622 1.00 20.10 O
ATOM 6 C5' U B 12 34.593 -0.699 5.751 1.00 18.77 C
ATOM 7 C4' U B 12 34.314 -1.854 4.844 1.00 22.00 C
ATOM 8 O4' U B 12 35.485 -2.133 4.052 1.00 21.61 O
ATOM 9 C3' U B 12 34.063 -3.142 5.589 1.00 25.81 C
ATOM 10 O3' U B 12 32.694 -3.186 5.957 1.00 30.51 O
ATOM 11 C2' U B 12 34.416 -4.207 4.557 1.00 23.12 C
ATOM 12 O2' U B 12 33.317 -4.496 3.711 1.00 19.21 O
ATOM 13 C1' U B 12 35.546 -3.520 3.781 1.00 22.82 C
ATOM 14 N1 U B 12 36.896 -3.974 4.138 1.00 23.05 N
ATOM 15 C2 U B 12 37.233 -5.282 3.866 1.00 25.60 C
ATOM 16 O2 U B 12 36.456 -6.069 3.349 1.00 28.35 O
ATOM 17 N3 U B 12 38.512 -5.636 4.221 1.00 22.84 N
ATOM 18 C4 U B 12 39.461 -4.826 4.809 1.00 25.54 C
ATOM 19 O4 U B 12 40.572 -5.283 5.080 1.00 29.23 O
ATOM 20 C5 U B 12 39.029 -3.488 5.057 1.00 26.80 C
ATOM 21 C6 U B 12 37.791 -3.119 4.721 1.00 22.94 C
ATOM 22 P A B 13 32.309 -3.532 7.466 1.00 33.11 P
ATOM 23 OP1 A B 13 30.850 -3.274 7.628 1.00 32.02 O
ATOM 24 OP2 A B 13 33.298 -2.814 8.326 1.00 23.99 O
ATOM 25 O5' A B 13 32.561 -5.105 7.543 1.00 28.11 O
TER

Atoms:
OP1: (36.896,4.350,9.823)
OP2: (34.369,3.827,10.060)
C3': (36.504,-0.412,9.258)
C1': (35.805,-1.898,10.968)
C5': (37.179,1.442,10.839)
O6: (30.076,-3.544,11.258)
O4': (36.249,-0.682,11.535)
C8: (33.463,-0.939,11.062)
C2: (33.162,-5.295,11.238)
C6: (31.297,-3.705,11.236)
C5: (32.312,-2.721,11.186)
C4: (33.625,-3.125,11.163)
P: (35.786,3.606,10.483)
C4': (37.128,-0.031,10.583)
C2': (36.229,-1.889,9.492)
O2': (37.420,-2.638,9.327)
N1: (31.825,-4.993,11.259)
N2: (33.478,-6.603,11.265)
N3: (34.123,-4.381,11.190)
N7: (32.222,-1.338,11.129)
N9: (34.358,-1.975,11.066)
O5': (36.004,2.043,10.350)
O3': (37.447,-0.235,8.207)
C4: (39.461,-4.826,4.809)
N3: (38.512,-5.636,4.221)
OP1: (37.952,-0.691,5.788)
OP2: (36.507,1.312,6.493)
C2: (37.233,-5.282,3.866)
C1': (35.546,-3.520,3.781)
C3': (34.063,-3.142,5.589)
O5': (35.646,-1.025,6.622)
O4': (35.485,-2.133,4.052)
C5': (34.593,-0.699,5.751)
P: (36.932,-0.098,6.689)
C4': (34.314,-1.854,4.844)
C2': (34.416,-4.207,4.557)
O2': (33.317,-4.496,3.711)
N1: (36.896,-3.974,4.138)
O4: (40.572,-5.283,5.080)
O2: (36.456,-6.069,3.349)
C6: (37.791,-3.119,4.721)
C5: (39.029,-3.488,5.057)
O3': (32.694,-3.186,5.957)
Image (generated by PyMOL):
PyMOL image
show in jmol