Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:B30:B12
Extra
PDB:
ATOM 1 O3' A A 29 31.638 29.685 16.370 1.00 23.01 O
ATOM 2 P U A 30 32.265 30.615 17.476 1.00 22.18 P
ATOM 3 OP1 U A 30 31.136 31.092 18.285 1.00 24.83 O
ATOM 4 OP2 U A 30 33.187 31.563 16.827 1.00 23.82 O
ATOM 5 O5' U A 30 33.134 29.643 18.359 1.00 20.14 O
ATOM 6 C5' U A 30 32.859 29.548 19.702 1.00 20.88 C
ATOM 7 C4' U A 30 33.724 28.485 20.293 1.00 21.75 C
ATOM 8 O4' U A 30 34.236 27.678 19.205 1.00 22.17 O
ATOM 9 C3' U A 30 34.970 28.957 21.036 1.00 22.57 C
ATOM 10 O3' U A 30 34.696 29.353 22.378 1.00 21.49 O
ATOM 11 C2' U A 30 35.828 27.693 20.978 1.00 23.35 C
ATOM 12 O2' U A 30 35.493 26.702 21.931 1.00 24.41 O
ATOM 13 C1' U A 30 35.540 27.226 19.545 1.00 22.81 C
ATOM 14 N1 U A 30 36.508 27.808 18.642 1.00 21.57 N
ATOM 15 C2 U A 30 37.786 27.308 18.657 1.00 20.19 C
ATOM 16 O2 U A 30 38.136 26.378 19.332 1.00 18.61 O
ATOM 17 N3 U A 30 38.642 27.927 17.842 1.00 21.18 N
ATOM 18 C4 U A 30 38.356 28.975 17.014 1.00 22.90 C
ATOM 19 O4 U A 30 39.247 29.426 16.304 1.00 24.65 O
ATOM 20 C5 U A 30 36.995 29.457 17.060 1.00 22.45 C
ATOM 21 C6 U A 30 36.141 28.881 17.877 1.00 21.25 C
ATOM 22 P A A 31 34.829 30.853 22.870 1.00 20.47 P
ATOM 23 OP1 A A 31 33.455 31.301 23.238 1.00 17.73 O
ATOM 24 OP2 A A 31 35.649 31.622 21.913 1.00 20.77 O
ATOM 25 O5' A A 31 35.748 30.700 24.115 1.00 16.63 O
TER
ATOM 1 O3' U B 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 2 P G B 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 3 OP1 G B 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 4 OP2 G B 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 5 O5' G B 12 44.514 30.043 17.225 1.00 24.57 O
ATOM 6 C5' G B 12 45.371 29.073 17.728 1.00 25.00 C
ATOM 7 C4' G B 12 44.595 28.133 18.597 1.00 26.18 C
ATOM 8 O4' G B 12 43.581 28.880 19.308 1.00 28.03 O
ATOM 9 C3' G B 12 43.854 27.040 17.863 1.00 25.46 C
ATOM 10 O3' G B 12 43.883 25.851 18.601 1.00 23.16 O
ATOM 11 C2' G B 12 42.447 27.575 17.744 1.00 27.05 C
ATOM 12 O2' G B 12 41.511 26.525 17.720 1.00 29.56 O
ATOM 13 C1' G B 12 42.307 28.412 18.997 1.00 28.02 C
ATOM 14 N9 G B 12 41.461 29.577 18.852 1.00 30.03 N
ATOM 15 C8 G B 12 41.544 30.543 17.890 1.00 31.37 C
ATOM 16 N7 G B 12 40.640 31.488 18.035 1.00 32.53 N
ATOM 17 C5 G B 12 39.930 31.126 19.176 1.00 31.61 C
ATOM 18 C6 G B 12 38.830 31.753 19.827 1.00 30.52 C
ATOM 19 O6 G B 12 38.247 32.803 19.527 1.00 30.65 O
ATOM 20 N1 G B 12 38.420 31.061 20.951 1.00 30.08 N
ATOM 21 C2 G B 12 38.999 29.900 21.377 1.00 30.73 C
ATOM 22 N2 G B 12 38.489 29.354 22.475 1.00 31.01 N
ATOM 23 N3 G B 12 40.017 29.301 20.786 1.00 32.07 N
ATOM 24 C4 G B 12 40.432 29.960 19.690 1.00 31.52 C
ATOM 25 P C B 13 43.844 24.469 17.836 1.00 22.42 P
ATOM 26 OP1 C B 13 45.028 24.441 16.943 1.00 21.84 O
ATOM 27 OP2 C B 13 42.472 24.298 17.296 1.00 22.32 O
ATOM 28 O5' C B 13 43.999 23.382 18.991 1.00 22.82 O
TER
ATOM 2 P U A 30 32.265 30.615 17.476 1.00 22.18 P
ATOM 3 OP1 U A 30 31.136 31.092 18.285 1.00 24.83 O
ATOM 4 OP2 U A 30 33.187 31.563 16.827 1.00 23.82 O
ATOM 5 O5' U A 30 33.134 29.643 18.359 1.00 20.14 O
ATOM 6 C5' U A 30 32.859 29.548 19.702 1.00 20.88 C
ATOM 7 C4' U A 30 33.724 28.485 20.293 1.00 21.75 C
ATOM 8 O4' U A 30 34.236 27.678 19.205 1.00 22.17 O
ATOM 9 C3' U A 30 34.970 28.957 21.036 1.00 22.57 C
ATOM 10 O3' U A 30 34.696 29.353 22.378 1.00 21.49 O
ATOM 11 C2' U A 30 35.828 27.693 20.978 1.00 23.35 C
ATOM 12 O2' U A 30 35.493 26.702 21.931 1.00 24.41 O
ATOM 13 C1' U A 30 35.540 27.226 19.545 1.00 22.81 C
ATOM 14 N1 U A 30 36.508 27.808 18.642 1.00 21.57 N
ATOM 15 C2 U A 30 37.786 27.308 18.657 1.00 20.19 C
ATOM 16 O2 U A 30 38.136 26.378 19.332 1.00 18.61 O
ATOM 17 N3 U A 30 38.642 27.927 17.842 1.00 21.18 N
ATOM 18 C4 U A 30 38.356 28.975 17.014 1.00 22.90 C
ATOM 19 O4 U A 30 39.247 29.426 16.304 1.00 24.65 O
ATOM 20 C5 U A 30 36.995 29.457 17.060 1.00 22.45 C
ATOM 21 C6 U A 30 36.141 28.881 17.877 1.00 21.25 C
ATOM 22 P A A 31 34.829 30.853 22.870 1.00 20.47 P
ATOM 23 OP1 A A 31 33.455 31.301 23.238 1.00 17.73 O
ATOM 24 OP2 A A 31 35.649 31.622 21.913 1.00 20.77 O
ATOM 25 O5' A A 31 35.748 30.700 24.115 1.00 16.63 O
TER
ATOM 1 O3' U B 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 2 P G B 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 3 OP1 G B 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 4 OP2 G B 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 5 O5' G B 12 44.514 30.043 17.225 1.00 24.57 O
ATOM 6 C5' G B 12 45.371 29.073 17.728 1.00 25.00 C
ATOM 7 C4' G B 12 44.595 28.133 18.597 1.00 26.18 C
ATOM 8 O4' G B 12 43.581 28.880 19.308 1.00 28.03 O
ATOM 9 C3' G B 12 43.854 27.040 17.863 1.00 25.46 C
ATOM 10 O3' G B 12 43.883 25.851 18.601 1.00 23.16 O
ATOM 11 C2' G B 12 42.447 27.575 17.744 1.00 27.05 C
ATOM 12 O2' G B 12 41.511 26.525 17.720 1.00 29.56 O
ATOM 13 C1' G B 12 42.307 28.412 18.997 1.00 28.02 C
ATOM 14 N9 G B 12 41.461 29.577 18.852 1.00 30.03 N
ATOM 15 C8 G B 12 41.544 30.543 17.890 1.00 31.37 C
ATOM 16 N7 G B 12 40.640 31.488 18.035 1.00 32.53 N
ATOM 17 C5 G B 12 39.930 31.126 19.176 1.00 31.61 C
ATOM 18 C6 G B 12 38.830 31.753 19.827 1.00 30.52 C
ATOM 19 O6 G B 12 38.247 32.803 19.527 1.00 30.65 O
ATOM 20 N1 G B 12 38.420 31.061 20.951 1.00 30.08 N
ATOM 21 C2 G B 12 38.999 29.900 21.377 1.00 30.73 C
ATOM 22 N2 G B 12 38.489 29.354 22.475 1.00 31.01 N
ATOM 23 N3 G B 12 40.017 29.301 20.786 1.00 32.07 N
ATOM 24 C4 G B 12 40.432 29.960 19.690 1.00 31.52 C
ATOM 25 P C B 13 43.844 24.469 17.836 1.00 22.42 P
ATOM 26 OP1 C B 13 45.028 24.441 16.943 1.00 21.84 O
ATOM 27 OP2 C B 13 42.472 24.298 17.296 1.00 22.32 O
ATOM 28 O5' C B 13 43.999 23.382 18.991 1.00 22.82 O
TER
Atoms:
C4: (38.356,28.975,17.014)
N3: (38.642,27.927,17.842)
OP1: (31.136,31.092,18.285)
OP2: (33.187,31.563,16.827)
C2: (37.786,27.308,18.657)
C1': (35.540,27.226,19.545)
C3': (34.970,28.957,21.036)
O5': (33.134,29.643,18.359)
O4': (34.236,27.678,19.205)
C5': (32.859,29.548,19.702)
P: (32.265,30.615,17.476)
C4': (33.724,28.485,20.293)
C2': (35.828,27.693,20.978)
O2': (35.493,26.702,21.931)
N1: (36.508,27.808,18.642)
O4: (39.247,29.426,16.304)
O2: (38.136,26.378,19.332)
C6: (36.141,28.881,17.877)
C5: (36.995,29.457,17.060)
O3': (34.696,29.353,22.378)
N3: (38.642,27.927,17.842)
OP1: (31.136,31.092,18.285)
OP2: (33.187,31.563,16.827)
C2: (37.786,27.308,18.657)
C1': (35.540,27.226,19.545)
C3': (34.970,28.957,21.036)
O5': (33.134,29.643,18.359)
O4': (34.236,27.678,19.205)
C5': (32.859,29.548,19.702)
P: (32.265,30.615,17.476)
C4': (33.724,28.485,20.293)
C2': (35.828,27.693,20.978)
O2': (35.493,26.702,21.931)
N1: (36.508,27.808,18.642)
O4: (39.247,29.426,16.304)
O2: (38.136,26.378,19.332)
C6: (36.141,28.881,17.877)
C5: (36.995,29.457,17.060)
O3': (34.696,29.353,22.378)
OP1: (45.977,30.220,15.279)
OP2: (43.997,31.775,15.566)
C3': (43.854,27.040,17.863)
C1': (42.307,28.412,18.997)
C5': (45.371,29.073,17.728)
O6: (38.247,32.803,19.527)
O4': (43.581,28.880,19.308)
C8: (41.544,30.543,17.890)
C2: (38.999,29.900,21.377)
C6: (38.830,31.753,19.827)
C5: (39.930,31.126,19.176)
C4: (40.432,29.960,19.690)
P: (45.104,31.018,16.145)
C4': (44.595,28.133,18.597)
C2': (42.447,27.575,17.744)
O2': (41.511,26.525,17.720)
N1: (38.420,31.061,20.951)
N2: (38.489,29.354,22.475)
N3: (40.017,29.301,20.786)
N7: (40.640,31.488,18.035)
N9: (41.461,29.577,18.852)
O5': (44.514,30.043,17.225)
O3': (43.883,25.851,18.601)
OP2: (43.997,31.775,15.566)
C3': (43.854,27.040,17.863)
C1': (42.307,28.412,18.997)
C5': (45.371,29.073,17.728)
O6: (38.247,32.803,19.527)
O4': (43.581,28.880,19.308)
C8: (41.544,30.543,17.890)
C2: (38.999,29.900,21.377)
C6: (38.830,31.753,19.827)
C5: (39.930,31.126,19.176)
C4: (40.432,29.960,19.690)
P: (45.104,31.018,16.145)
C4': (44.595,28.133,18.597)
C2': (42.447,27.575,17.744)
O2': (41.511,26.525,17.720)
N1: (38.420,31.061,20.951)
N2: (38.489,29.354,22.475)
N3: (40.017,29.301,20.786)
N7: (40.640,31.488,18.035)
N9: (41.461,29.577,18.852)
O5': (44.514,30.043,17.225)
O3': (43.883,25.851,18.601)
Image (generated by PyMOL):