ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1374:A1375

Extra

PDB:
ATOM 1 O3' G A1373 9.164 -20.803 -52.591 1.00 85.48 O
ATOM 2 P A A1374 9.959 -21.391 -51.311 1.00 79.77 P
ATOM 3 OP1 A A1374 10.405 -22.763 -51.671 1.00 74.89 O
ATOM 4 OP2 A A1374 9.116 -21.188 -50.107 1.00 80.84 O
ATOM 5 O5' A A1374 11.265 -20.485 -51.177 1.00 84.11 O
ATOM 6 C5' A A1374 12.518 -21.032 -50.731 1.00 92.83 C
ATOM 7 C4' A A1374 13.553 -20.927 -51.836 1.00 88.87 C
ATOM 8 O4' A A1374 13.301 -19.719 -52.582 1.00 85.01 O
ATOM 9 C3' A A1374 15.022 -20.852 -51.407 1.00 94.81 C
ATOM 10 O3' A A1374 15.641 -22.149 -51.400 1.00100.70 O
ATOM 11 C2' A A1374 15.676 -20.044 -52.535 1.00 95.19 C
ATOM 12 O2' A A1374 16.209 -20.835 -53.580 1.00107.75 O
ATOM 13 C1' A A1374 14.510 -19.245 -53.115 1.00 88.64 C
ATOM 14 N9 A A1374 14.578 -17.794 -52.964 1.00 90.54 N
ATOM 15 C8 A A1374 13.878 -16.962 -52.126 1.00 88.22 C
ATOM 16 N7 A A1374 14.191 -15.696 -52.261 1.00 84.98 N
ATOM 17 C5 A A1374 15.164 -15.698 -53.255 1.00 86.27 C
ATOM 18 C6 A A1374 15.913 -14.663 -53.856 1.00 89.62 C
ATOM 19 N6 A A1374 15.800 -13.370 -53.540 1.00 93.24 N
ATOM 20 N1 A A1374 16.800 -15.011 -54.812 1.00 89.40 N
ATOM 21 C2 A A1374 16.918 -16.304 -55.137 1.00 89.03 C
ATOM 22 N3 A A1374 16.275 -17.360 -54.647 1.00 91.83 N
ATOM 23 C4 A A1374 15.405 -16.983 -53.696 1.00 88.23 C
ATOM 24 P U A1375 15.459 -23.153 -50.153 1.00101.34 P
ATOM 25 OP1 U A1375 15.030 -24.457 -50.731 1.00101.73 O
ATOM 26 OP2 U A1375 14.620 -22.498 -49.112 1.00 99.01 O
ATOM 27 O5' U A1375 16.927 -23.346 -49.561 1.00 96.79 O
TER

ATOM 1 O3' A B1374 15.641 -22.149 -51.400 1.00100.70 O
ATOM 2 P U B1375 15.459 -23.153 -50.153 1.00101.34 P
ATOM 3 OP1 U B1375 15.030 -24.457 -50.731 1.00101.73 O
ATOM 4 OP2 U B1375 14.620 -22.498 -49.112 1.00 99.01 O
ATOM 5 O5' U B1375 16.927 -23.346 -49.561 1.00 96.79 O
ATOM 6 C5' U B1375 17.837 -22.248 -49.441 1.00 94.49 C
ATOM 7 C4' U B1375 19.197 -22.636 -49.980 1.00 98.84 C
ATOM 8 O4' U B1375 19.015 -23.492 -51.121 1.00100.32 O
ATOM 9 C3' U B1375 20.072 -21.472 -50.441 1.00101.57 C
ATOM 10 O3' U B1375 20.981 -21.155 -49.381 1.00 95.52 O
ATOM 11 C2' U B1375 20.851 -22.024 -51.645 1.00102.02 C
ATOM 12 O2' U B1375 22.194 -22.353 -51.362 1.00109.36 O
ATOM 13 C1' U B1375 20.072 -23.291 -52.024 1.00 99.11 C
ATOM 14 N1 U B1375 19.537 -23.416 -53.385 1.00 99.66 N
ATOM 15 C2 U B1375 20.294 -24.118 -54.315 1.00107.08 C
ATOM 16 O2 U B1375 21.414 -24.550 -54.081 1.00102.25 O
ATOM 17 N3 U B1375 19.691 -24.295 -55.536 1.00115.01 N
ATOM 18 C4 U B1375 18.443 -23.848 -55.920 1.00115.16 C
ATOM 19 O4 U B1375 17.990 -24.181 -57.020 1.00111.63 O
ATOM 20 C5 U B1375 17.748 -23.092 -54.919 1.00107.91 C
ATOM 21 C6 U B1375 18.308 -22.903 -53.719 1.00103.03 C
ATOM 22 P G B1376 21.199 -19.632 -48.915 1.00103.30 P
ATOM 23 OP1 G B1376 22.594 -19.524 -48.408 1.00101.92 O
ATOM 24 OP2 G B1376 20.054 -19.260 -48.034 1.00 90.39 O
ATOM 25 O5' G B1376 21.094 -18.778 -50.258 1.00 97.32 O
TER

Atoms:
OP1: (10.405,-22.763,-51.671)
OP2: (9.116,-21.188,-50.107)
C3': (15.022,-20.852,-51.407)
C1': (14.510,-19.245,-53.115)
C5': (12.518,-21.032,-50.731)
O4': (13.301,-19.719,-52.582)
C8: (13.878,-16.962,-52.126)
O2': (16.209,-20.835,-53.580)
C6: (15.913,-14.663,-53.856)
C5: (15.164,-15.698,-53.255)
C4: (15.405,-16.983,-53.696)
P: (9.959,-21.391,-51.311)
C4': (13.553,-20.927,-51.836)
C2': (15.676,-20.044,-52.535)
C2: (16.918,-16.304,-55.137)
N1: (16.800,-15.011,-54.812)
N3: (16.275,-17.360,-54.647)
N6: (15.800,-13.370,-53.540)
N7: (14.191,-15.696,-52.261)
N9: (14.578,-17.794,-52.964)
O5': (11.265,-20.485,-51.177)
O3': (15.641,-22.149,-51.400)
C4: (18.443,-23.848,-55.920)
N3: (19.691,-24.295,-55.536)
OP1: (15.030,-24.457,-50.731)
OP2: (14.620,-22.498,-49.112)
C2: (20.294,-24.118,-54.315)
C1': (20.072,-23.291,-52.024)
C3': (20.072,-21.472,-50.441)
O5': (16.927,-23.346,-49.561)
O4': (19.015,-23.492,-51.121)
C5': (17.837,-22.248,-49.441)
P: (15.459,-23.153,-50.153)
C4': (19.197,-22.636,-49.980)
C2': (20.851,-22.024,-51.645)
O2': (22.194,-22.353,-51.362)
N1: (19.537,-23.416,-53.385)
O4: (17.990,-24.181,-57.020)
O2: (21.414,-24.550,-54.081)
C6: (18.308,-22.903,-53.719)
C5: (17.748,-23.092,-54.919)
O3': (20.981,-21.155,-49.381)
Image (generated by PyMOL):
PyMOL image
show in jmol