ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:788:789

Extra

PDB:
ATOM 1 O3' G A 87 125.864 -0.582 282.445 1.00 39.41 O
ATOM 2 P G A 88 126.578 0.487 281.541 1.00 36.12 P
ATOM 3 OP1 G A 88 126.605 1.733 282.337 1.00 36.65 O
ATOM 4 OP2 G A 88 125.922 0.489 280.224 1.00 35.39 O
ATOM 5 O5' G A 88 128.011 -0.098 281.418 1.00 35.90 O
ATOM 6 C5' G A 88 128.882 -0.081 282.523 1.00 36.48 C
ATOM 7 C4' G A 88 130.152 -0.782 282.201 1.00 36.15 C
ATOM 8 O4' G A 88 129.879 -2.166 281.929 1.00 35.96 O
ATOM 9 C3' G A 88 130.884 -0.312 280.964 1.00 35.37 C
ATOM 10 O3' G A 88 131.581 0.910 281.183 1.00 35.49 O
ATOM 11 C2' G A 88 131.800 -1.492 280.723 1.00 35.10 C
ATOM 12 O2' G A 88 132.888 -1.468 281.655 1.00 35.57 O
ATOM 13 C1' G A 88 130.861 -2.677 281.083 1.00 35.35 C
ATOM 14 N9 G A 88 130.218 -3.200 279.882 1.00 34.68 N
ATOM 15 C8 G A 88 129.051 -2.799 279.332 1.00 34.47 C
ATOM 16 N7 G A 88 128.855 -3.331 278.181 1.00 33.79 N
ATOM 17 C5 G A 88 129.967 -4.105 277.946 1.00 33.54 C
ATOM 18 C6 G A 88 130.323 -4.917 276.850 1.00 32.84 C
ATOM 19 O6 G A 88 129.674 -5.110 275.806 1.00 32.29 O
ATOM 20 N1 G A 88 131.550 -5.540 276.985 1.00 32.81 N
ATOM 21 C2 G A 88 132.341 -5.388 278.077 1.00 33.39 C
ATOM 22 N2 G A 88 133.531 -6.070 278.066 1.00 33.27 N
ATOM 23 N3 G A 88 131.998 -4.609 279.117 1.00 34.04 N
ATOM 24 C4 G A 88 130.816 -4.011 278.975 1.00 34.07 C
ATOM 25 P U A 89 131.418 2.189 280.211 1.00 49.50 P
ATOM 26 OP1 U A 89 131.910 3.325 280.940 1.00 49.94 O
ATOM 27 OP2 U A 89 130.044 2.219 279.711 1.00 49.32 O
ATOM 28 O5' U A 89 132.402 1.855 279.021 1.00 48.69 O
TER

ATOM 1 O3' G B 88 131.581 0.910 281.183 1.00 35.49 O
ATOM 2 P U B 89 131.418 2.189 280.211 1.00 49.50 P
ATOM 3 OP1 U B 89 131.910 3.325 280.940 1.00 49.94 O
ATOM 4 OP2 U B 89 130.044 2.219 279.711 1.00 49.32 O
ATOM 5 O5' U B 89 132.402 1.855 279.021 1.00 48.69 O
ATOM 6 C5' U B 89 132.028 2.080 277.661 1.00 47.93 C
ATOM 7 C4' U B 89 133.242 2.035 276.765 1.00 47.31 C
ATOM 8 O4' U B 89 134.352 2.675 277.438 1.00 47.64 O
ATOM 9 C3' U B 89 133.785 0.656 276.449 1.00 47.03 C
ATOM 10 O3' U B 89 133.117 0.056 275.392 1.00 46.44 O
ATOM 11 C2' U B 89 135.202 0.959 276.093 1.00 46.72 C
ATOM 12 O2' U B 89 135.224 1.544 274.807 1.00 46.00 O
ATOM 13 C1' U B 89 135.545 2.033 277.107 1.00 47.33 C
ATOM 14 N1 U B 89 136.075 1.475 278.305 1.00 47.97 N
ATOM 15 C2 U B 89 137.354 0.924 278.293 1.00 47.84 C
ATOM 16 O2 U B 89 138.071 0.870 277.299 1.00 47.21 O
ATOM 17 N3 U B 89 137.764 0.409 279.500 1.00 48.50 N
ATOM 18 C4 U B 89 136.992 0.434 280.656 1.00 49.24 C
ATOM 19 O4 U B 89 137.442 -0.068 281.692 1.00 49.79 O
ATOM 20 C5 U B 89 135.686 1.039 280.562 1.00 49.31 C
ATOM 21 C6 U B 89 135.267 1.520 279.405 1.00 48.68 C
ATOM 22 P G B 90 132.494 -1.385 275.569 1.00 37.12 P
ATOM 23 OP1 G B 90 131.813 -1.707 274.266 1.00 36.41 O
ATOM 24 OP2 G B 90 131.699 -1.358 276.828 1.00 37.92 O
ATOM 25 O5' G B 90 133.775 -2.330 275.778 1.00 37.12 O
TER

Atoms:
OP1: (126.605,1.733,282.337)
OP2: (125.922,0.489,280.224)
C3': (130.884,-0.312,280.964)
C1': (130.861,-2.677,281.083)
C5': (128.882,-0.081,282.523)
O6: (129.674,-5.110,275.806)
O4': (129.879,-2.166,281.929)
C8: (129.051,-2.799,279.332)
C2: (132.341,-5.388,278.077)
C6: (130.323,-4.917,276.850)
C5: (129.967,-4.105,277.946)
C4: (130.816,-4.011,278.975)
P: (126.578,0.487,281.541)
C4': (130.152,-0.782,282.201)
C2': (131.800,-1.492,280.723)
O2': (132.888,-1.468,281.655)
N1: (131.550,-5.540,276.985)
N2: (133.531,-6.070,278.066)
N3: (131.998,-4.609,279.117)
N7: (128.855,-3.331,278.181)
N9: (130.218,-3.200,279.882)
O5': (128.011,-0.098,281.418)
O3': (131.581,0.910,281.183)
C4: (136.992,0.434,280.656)
N3: (137.764,0.409,279.500)
OP1: (131.910,3.325,280.940)
OP2: (130.044,2.219,279.711)
C2: (137.354,0.924,278.293)
C1': (135.545,2.033,277.107)
C3': (133.785,0.656,276.449)
O5': (132.402,1.855,279.021)
O4': (134.352,2.675,277.438)
C5': (132.028,2.080,277.661)
P: (131.418,2.189,280.211)
C4': (133.242,2.035,276.765)
C2': (135.202,0.959,276.093)
O2': (135.224,1.544,274.807)
N1: (136.075,1.475,278.305)
O4: (137.442,-0.068,281.692)
O2: (138.071,0.870,277.299)
C6: (135.267,1.520,279.405)
C5: (135.686,1.039,280.562)
O3': (133.117,0.056,275.392)
Image (generated by PyMOL):
PyMOL image
show in jmol