ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0C:B34:B30

Extra

PDB:
ATOM 1 O3' G A 33 21.920 -5.743 24.663 1.00 64.03 O
ATOM 2 P A A 34 22.035 -4.149 24.516 1.00 58.45 P
ATOM 3 OP1 A A 34 22.771 -3.602 25.687 1.00 65.05 O
ATOM 4 OP2 A A 34 20.644 -3.695 24.235 1.00 54.42 O
ATOM 5 O5' A A 34 22.874 -3.924 23.183 1.00 54.98 O
ATOM 6 C5' A A 34 24.136 -3.249 23.206 1.00 44.14 C
ATOM 7 C4' A A 34 24.547 -2.919 21.806 1.00 43.19 C
ATOM 8 O4' A A 34 24.572 -4.149 21.038 1.00 50.29 O
ATOM 9 C3' A A 34 23.546 -2.069 21.055 1.00 48.03 C
ATOM 10 O3' A A 34 23.726 -0.698 21.358 1.00 52.20 O
ATOM 11 C2' A A 34 23.883 -2.395 19.607 1.00 50.08 C
ATOM 12 O2' A A 34 25.058 -1.759 19.159 1.00 54.54 O
ATOM 13 C1' A A 34 24.164 -3.892 19.703 1.00 51.76 C
ATOM 14 N9 A A 34 22.984 -4.702 19.398 1.00 54.38 N
ATOM 15 C8 A A 34 22.242 -5.504 20.234 1.00 50.78 C
ATOM 16 N7 A A 34 21.222 -6.081 19.643 1.00 47.59 N
ATOM 17 C5 A A 34 21.299 -5.634 18.331 1.00 50.31 C
ATOM 18 C6 A A 34 20.502 -5.879 17.198 1.00 53.42 C
ATOM 19 N6 A A 34 19.423 -6.663 17.209 1.00 56.73 N
ATOM 20 N1 A A 34 20.856 -5.281 16.037 1.00 53.54 N
ATOM 21 C2 A A 34 21.939 -4.494 16.028 1.00 50.26 C
ATOM 22 N3 A A 34 22.766 -4.185 17.026 1.00 48.71 N
ATOM 23 C4 A A 34 22.385 -4.792 18.163 1.00 51.45 C
ATOM 24 P U A 35 22.458 0.287 21.357 1.00 52.51 P
ATOM 25 OP1 U A 35 22.967 1.679 21.442 1.00 62.06 O
ATOM 26 OP2 U A 35 21.489 -0.207 22.372 1.00 58.83 O
ATOM 27 O5' U A 35 21.838 0.111 19.905 1.00 48.37 O
TER

ATOM 1 O3' U B 29 10.609 -9.783 18.944 1.00 76.95 O
ATOM 2 P U B 30 11.309 -11.182 19.271 1.00 82.92 P
ATOM 3 OP1 U B 30 10.670 -12.213 18.418 1.00 87.00 O
ATOM 4 OP2 U B 30 11.318 -11.344 20.752 1.00 78.44 O
ATOM 5 O5' U B 30 12.812 -10.970 18.791 1.00 83.02 O
ATOM 6 C5' U B 30 13.100 -10.573 17.437 1.00 77.27 C
ATOM 7 C4' U B 30 14.523 -10.078 17.324 1.00 71.53 C
ATOM 8 O4' U B 30 14.669 -8.823 18.031 1.00 64.86 O
ATOM 9 C3' U B 30 15.586 -10.967 17.947 1.00 69.39 C
ATOM 10 O3' U B 30 15.941 -12.023 17.063 1.00 68.56 O
ATOM 11 C2' U B 30 16.737 -9.986 18.125 1.00 66.74 C
ATOM 12 O2' U B 30 17.444 -9.751 16.923 1.00 68.47 O
ATOM 13 C1' U B 30 15.991 -8.714 18.526 1.00 64.01 C
ATOM 14 N1 U B 30 15.928 -8.568 19.983 1.00 66.36 N
ATOM 15 C2 U B 30 16.971 -7.909 20.597 1.00 68.80 C
ATOM 16 O2 U B 30 17.911 -7.434 19.976 1.00 64.54 O
ATOM 17 N3 U B 30 16.875 -7.822 21.967 1.00 70.92 N
ATOM 18 C4 U B 30 15.857 -8.311 22.763 1.00 66.45 C
ATOM 19 O4 U B 30 15.927 -8.181 23.991 1.00 63.80 O
ATOM 20 C5 U B 30 14.807 -8.968 22.043 1.00 67.78 C
ATOM 21 C6 U B 30 14.878 -9.072 20.710 1.00 65.14 C
ATOM 22 P C B 31 15.501 -13.531 17.401 1.00 62.54 P
ATOM 23 OP1 C B 31 14.668 -13.984 16.258 1.00 59.76 O
ATOM 24 OP2 C B 31 14.948 -13.577 18.782 1.00 59.96 O
ATOM 25 O5' C B 31 16.872 -14.344 17.376 1.00 61.36 O
TER

Atoms:
OP1: (22.771,-3.602,25.687)
OP2: (20.644,-3.695,24.235)
C3': (23.546,-2.069,21.055)
C1': (24.164,-3.892,19.703)
C5': (24.136,-3.249,23.206)
O4': (24.572,-4.149,21.038)
C8: (22.242,-5.504,20.234)
O2': (25.058,-1.759,19.159)
C6: (20.502,-5.879,17.198)
C5: (21.299,-5.634,18.331)
C4: (22.385,-4.792,18.163)
P: (22.035,-4.149,24.516)
C4': (24.547,-2.919,21.806)
C2': (23.883,-2.395,19.607)
C2: (21.939,-4.494,16.028)
N1: (20.856,-5.281,16.037)
N3: (22.766,-4.185,17.026)
N6: (19.423,-6.663,17.209)
N7: (21.222,-6.081,19.643)
N9: (22.984,-4.702,19.398)
O5': (22.874,-3.924,23.183)
O3': (23.726,-0.698,21.358)
C4: (15.857,-8.311,22.763)
N3: (16.875,-7.822,21.967)
OP1: (10.670,-12.213,18.418)
OP2: (11.318,-11.344,20.752)
C2: (16.971,-7.909,20.597)
C1': (15.991,-8.714,18.526)
C3': (15.586,-10.967,17.947)
O5': (12.812,-10.970,18.791)
O4': (14.669,-8.823,18.031)
C5': (13.100,-10.573,17.437)
P: (11.309,-11.182,19.271)
C4': (14.523,-10.078,17.324)
C2': (16.737,-9.986,18.125)
O2': (17.444,-9.751,16.923)
N1: (15.928,-8.568,19.983)
O4: (15.927,-8.181,23.991)
O2: (17.911,-7.434,19.976)
C6: (14.878,-9.072,20.710)
C5: (14.807,-8.968,22.043)
O3': (15.941,-12.023,17.063)
Image (generated by PyMOL):
PyMOL image
show in jmol