ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QTQ:B34:B30

Extra

PDB:
ATOM 1 O3' G A 33 21.951 -5.404 25.063 1.00 65.57 O
ATOM 2 P A A 34 21.712 -3.901 24.541 1.00 65.81 P
ATOM 3 OP1 A A 34 22.339 -2.978 25.527 1.00 66.95 O
ATOM 4 OP2 A A 34 20.271 -3.748 24.206 1.00 61.51 O
ATOM 5 O5' A A 34 22.538 -3.828 23.182 1.00 62.37 O
ATOM 6 C5' A A 34 23.882 -3.363 23.174 1.00 60.94 C
ATOM 7 C4' A A 34 24.309 -3.038 21.766 1.00 63.93 C
ATOM 8 O4' A A 34 24.417 -4.266 21.000 1.00 68.39 O
ATOM 9 C3' A A 34 23.338 -2.181 20.967 1.00 63.63 C
ATOM 10 O3' A A 34 23.478 -0.793 21.219 1.00 57.47 O
ATOM 11 C2' A A 34 23.687 -2.543 19.531 1.00 66.73 C
ATOM 12 O2' A A 34 24.835 -1.859 19.069 1.00 61.88 O
ATOM 13 C1' A A 34 24.005 -4.032 19.662 1.00 68.77 C
ATOM 14 N9 A A 34 22.829 -4.858 19.389 1.00 68.10 N
ATOM 15 C8 A A 34 22.110 -5.636 20.266 1.00 66.28 C
ATOM 16 N7 A A 34 21.103 -6.263 19.712 1.00 64.79 N
ATOM 17 C5 A A 34 21.158 -5.872 18.381 1.00 63.79 C
ATOM 18 C6 A A 34 20.360 -6.189 17.270 1.00 64.78 C
ATOM 19 N6 A A 34 19.310 -7.009 17.326 1.00 62.74 N
ATOM 20 N1 A A 34 20.682 -5.627 16.082 1.00 64.72 N
ATOM 21 C2 A A 34 21.736 -4.802 16.029 1.00 63.95 C
ATOM 22 N3 A A 34 22.563 -4.427 17.005 1.00 60.51 N
ATOM 23 C4 A A 34 22.214 -5.005 18.170 1.00 65.08 C
ATOM 24 P U A 35 22.183 0.156 21.132 1.00 61.45 P
ATOM 25 OP1 U A 35 22.651 1.558 21.233 1.00 66.70 O
ATOM 26 OP2 U A 35 21.165 -0.348 22.088 1.00 64.23 O
ATOM 27 O5' U A 35 21.636 -0.077 19.655 1.00 55.26 O
TER

ATOM 1 O3' U B 29 10.697 -9.953 18.922 1.00 92.72 O
ATOM 2 P U B 30 11.510 -11.314 19.159 1.00 98.88 P
ATOM 3 OP1 U B 30 10.930 -12.357 18.276 1.00 98.88 O
ATOM 4 OP2 U B 30 11.561 -11.535 20.631 1.00 94.09 O
ATOM 5 O5' U B 30 12.980 -10.975 18.645 1.00 96.24 O
ATOM 6 C5' U B 30 13.218 -10.656 17.276 1.00 91.13 C
ATOM 7 C4' U B 30 14.641 -10.192 17.089 1.00 88.81 C
ATOM 8 O4' U B 30 14.827 -8.895 17.711 1.00 87.67 O
ATOM 9 C3' U B 30 15.701 -11.075 17.726 1.00 86.43 C
ATOM 10 O3' U B 30 16.034 -12.172 16.889 1.00 81.81 O
ATOM 11 C2' U B 30 16.865 -10.113 17.911 1.00 83.01 C
ATOM 12 O2' U B 30 17.599 -9.948 16.718 1.00 78.94 O
ATOM 13 C1' U B 30 16.139 -8.808 18.241 1.00 83.24 C
ATOM 14 N1 U B 30 16.037 -8.596 19.690 1.00 82.70 N
ATOM 15 C2 U B 30 17.106 -7.996 20.325 1.00 83.49 C
ATOM 16 O2 U B 30 18.104 -7.626 19.729 1.00 76.76 O
ATOM 17 N3 U B 30 16.962 -7.848 21.685 1.00 88.60 N
ATOM 18 C4 U B 30 15.875 -8.233 22.456 1.00 87.70 C
ATOM 19 O4 U B 30 15.907 -8.077 23.681 1.00 81.39 O
ATOM 20 C5 U B 30 14.808 -8.835 21.717 1.00 87.14 C
ATOM 21 C6 U B 30 14.922 -8.990 20.393 1.00 85.11 C
ATOM 22 P C B 31 15.473 -13.633 17.247 1.00 77.41 P
ATOM 23 OP1 C B 31 14.687 -14.100 16.081 1.00 77.41 O
ATOM 24 OP2 C B 31 14.826 -13.556 18.585 1.00 71.98 O
ATOM 25 O5' C B 31 16.779 -14.537 17.370 1.00 74.18 O
TER

Atoms:
OP1: (22.339,-2.978,25.527)
OP2: (20.271,-3.748,24.206)
C3': (23.338,-2.181,20.967)
C1': (24.005,-4.032,19.662)
C5': (23.882,-3.363,23.174)
O4': (24.417,-4.266,21.000)
C8: (22.110,-5.636,20.266)
O2': (24.835,-1.859,19.069)
C6: (20.360,-6.189,17.270)
C5: (21.158,-5.872,18.381)
C4: (22.214,-5.005,18.170)
P: (21.712,-3.901,24.541)
C4': (24.309,-3.038,21.766)
C2': (23.687,-2.543,19.531)
C2: (21.736,-4.802,16.029)
N1: (20.682,-5.627,16.082)
N3: (22.563,-4.427,17.005)
N6: (19.310,-7.009,17.326)
N7: (21.103,-6.263,19.712)
N9: (22.829,-4.858,19.389)
O5': (22.538,-3.828,23.182)
O3': (23.478,-0.793,21.219)
C4: (15.875,-8.233,22.456)
N3: (16.962,-7.848,21.685)
OP1: (10.930,-12.357,18.276)
OP2: (11.561,-11.535,20.631)
C2: (17.106,-7.996,20.325)
C1': (16.139,-8.808,18.241)
C3': (15.701,-11.075,17.726)
O5': (12.980,-10.975,18.645)
O4': (14.827,-8.895,17.711)
C5': (13.218,-10.656,17.276)
P: (11.510,-11.314,19.159)
C4': (14.641,-10.192,17.089)
C2': (16.865,-10.113,17.911)
O2': (17.599,-9.948,16.718)
N1: (16.037,-8.596,19.690)
O4: (15.907,-8.077,23.681)
O2: (18.104,-7.626,19.729)
C6: (14.922,-8.990,20.393)
C5: (14.808,-8.835,21.717)
O3': (16.034,-12.172,16.889)
Image (generated by PyMOL):
PyMOL image
show in jmol