Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2RD2:B34:B30
Extra
PDB:
ATOM 1 O3' G A 33 21.122 -5.771 24.687 1.00 72.56 O
ATOM 2 P A A 34 21.316 -4.216 24.386 1.00 65.16 P
ATOM 3 OP1 A A 34 22.111 -3.640 25.500 1.00 64.14 O
ATOM 4 OP2 A A 34 19.970 -3.675 24.087 1.00 58.46 O
ATOM 5 O5' A A 34 22.161 -4.184 23.034 1.00 62.05 O
ATOM 6 C5' A A 34 23.467 -3.618 22.991 1.00 53.60 C
ATOM 7 C4' A A 34 23.814 -3.240 21.575 1.00 52.18 C
ATOM 8 O4' A A 34 23.779 -4.433 20.753 1.00 58.72 O
ATOM 9 C3' A A 34 22.829 -2.304 20.892 1.00 56.22 C
ATOM 10 O3' A A 34 23.106 -0.946 21.213 1.00 60.17 O
ATOM 11 C2' A A 34 23.083 -2.593 19.417 1.00 58.33 C
ATOM 12 O2' A A 34 24.219 -1.930 18.899 1.00 60.01 O
ATOM 13 C1' A A 34 23.342 -4.098 19.445 1.00 59.09 C
ATOM 14 N9 A A 34 22.137 -4.866 19.151 1.00 55.63 N
ATOM 15 C8 A A 34 21.385 -5.621 20.014 1.00 49.67 C
ATOM 16 N7 A A 34 20.336 -6.174 19.453 1.00 46.81 N
ATOM 17 C5 A A 34 20.407 -5.757 18.131 1.00 51.95 C
ATOM 18 C6 A A 34 19.583 -5.996 17.022 1.00 52.42 C
ATOM 19 N6 A A 34 18.471 -6.729 17.076 1.00 57.68 N
ATOM 20 N1 A A 34 19.941 -5.443 15.841 1.00 52.91 N
ATOM 21 C2 A A 34 21.048 -4.694 15.799 1.00 57.85 C
ATOM 22 N3 A A 34 21.899 -4.391 16.777 1.00 56.87 N
ATOM 23 C4 A A 34 21.517 -4.960 17.930 1.00 54.91 C
ATOM 24 P U A 35 21.909 0.119 21.267 1.00 53.94 P
ATOM 25 OP1 U A 35 22.513 1.461 21.419 1.00 69.43 O
ATOM 26 OP2 U A 35 20.936 -0.365 22.275 1.00 74.24 O
ATOM 27 O5' U A 35 21.242 0.030 19.824 1.00 46.37 O
TER
ATOM 1 O3' U B 29 9.888 -9.492 18.634 1.00 78.13 O
ATOM 2 P U B 30 10.436 -10.980 18.854 1.00 90.43 P
ATOM 3 OP1 U B 30 9.713 -11.876 17.917 1.00 72.61 O
ATOM 4 OP2 U B 30 10.411 -11.258 20.314 1.00 63.17 O
ATOM 5 O5' U B 30 11.959 -10.880 18.405 1.00 91.08 O
ATOM 6 C5' U B 30 12.304 -10.349 17.132 1.00 86.77 C
ATOM 7 C4' U B 30 13.762 -9.960 17.103 1.00 84.69 C
ATOM 8 O4' U B 30 13.992 -8.781 17.915 1.00 83.29 O
ATOM 9 C3' U B 30 14.730 -10.974 17.683 1.00 82.24 C
ATOM 10 O3' U B 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 11 C2' U B 30 15.963 -10.113 17.930 1.00 82.86 C
ATOM 12 O2' U B 30 16.722 -9.897 16.760 1.00 82.19 O
ATOM 13 C1' U B 30 15.330 -8.796 18.386 1.00 82.72 C
ATOM 14 N1 U B 30 15.326 -8.682 19.849 1.00 61.18 N
ATOM 15 C2 U B 30 16.421 -8.081 20.436 1.00 61.66 C
ATOM 16 O2 U B 30 17.347 -7.623 19.791 1.00 60.96 O
ATOM 17 N3 U B 30 16.391 -8.036 21.807 1.00 65.76 N
ATOM 18 C4 U B 30 15.397 -8.513 22.631 1.00 64.47 C
ATOM 19 O4 U B 30 15.515 -8.394 23.852 1.00 64.18 O
ATOM 20 C5 U B 30 14.289 -9.106 21.945 1.00 64.01 C
ATOM 21 C6 U B 30 14.291 -9.166 20.610 1.00 63.86 C
ATOM 22 P C B 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 23 OP1 C B 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 24 OP2 C B 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 25 O5' C B 31 16.329 -14.122 17.064 1.00 77.93 O
TER
ATOM 2 P A A 34 21.316 -4.216 24.386 1.00 65.16 P
ATOM 3 OP1 A A 34 22.111 -3.640 25.500 1.00 64.14 O
ATOM 4 OP2 A A 34 19.970 -3.675 24.087 1.00 58.46 O
ATOM 5 O5' A A 34 22.161 -4.184 23.034 1.00 62.05 O
ATOM 6 C5' A A 34 23.467 -3.618 22.991 1.00 53.60 C
ATOM 7 C4' A A 34 23.814 -3.240 21.575 1.00 52.18 C
ATOM 8 O4' A A 34 23.779 -4.433 20.753 1.00 58.72 O
ATOM 9 C3' A A 34 22.829 -2.304 20.892 1.00 56.22 C
ATOM 10 O3' A A 34 23.106 -0.946 21.213 1.00 60.17 O
ATOM 11 C2' A A 34 23.083 -2.593 19.417 1.00 58.33 C
ATOM 12 O2' A A 34 24.219 -1.930 18.899 1.00 60.01 O
ATOM 13 C1' A A 34 23.342 -4.098 19.445 1.00 59.09 C
ATOM 14 N9 A A 34 22.137 -4.866 19.151 1.00 55.63 N
ATOM 15 C8 A A 34 21.385 -5.621 20.014 1.00 49.67 C
ATOM 16 N7 A A 34 20.336 -6.174 19.453 1.00 46.81 N
ATOM 17 C5 A A 34 20.407 -5.757 18.131 1.00 51.95 C
ATOM 18 C6 A A 34 19.583 -5.996 17.022 1.00 52.42 C
ATOM 19 N6 A A 34 18.471 -6.729 17.076 1.00 57.68 N
ATOM 20 N1 A A 34 19.941 -5.443 15.841 1.00 52.91 N
ATOM 21 C2 A A 34 21.048 -4.694 15.799 1.00 57.85 C
ATOM 22 N3 A A 34 21.899 -4.391 16.777 1.00 56.87 N
ATOM 23 C4 A A 34 21.517 -4.960 17.930 1.00 54.91 C
ATOM 24 P U A 35 21.909 0.119 21.267 1.00 53.94 P
ATOM 25 OP1 U A 35 22.513 1.461 21.419 1.00 69.43 O
ATOM 26 OP2 U A 35 20.936 -0.365 22.275 1.00 74.24 O
ATOM 27 O5' U A 35 21.242 0.030 19.824 1.00 46.37 O
TER
ATOM 1 O3' U B 29 9.888 -9.492 18.634 1.00 78.13 O
ATOM 2 P U B 30 10.436 -10.980 18.854 1.00 90.43 P
ATOM 3 OP1 U B 30 9.713 -11.876 17.917 1.00 72.61 O
ATOM 4 OP2 U B 30 10.411 -11.258 20.314 1.00 63.17 O
ATOM 5 O5' U B 30 11.959 -10.880 18.405 1.00 91.08 O
ATOM 6 C5' U B 30 12.304 -10.349 17.132 1.00 86.77 C
ATOM 7 C4' U B 30 13.762 -9.960 17.103 1.00 84.69 C
ATOM 8 O4' U B 30 13.992 -8.781 17.915 1.00 83.29 O
ATOM 9 C3' U B 30 14.730 -10.974 17.683 1.00 82.24 C
ATOM 10 O3' U B 30 15.001 -12.010 16.751 1.00 80.06 O
ATOM 11 C2' U B 30 15.963 -10.113 17.930 1.00 82.86 C
ATOM 12 O2' U B 30 16.722 -9.897 16.760 1.00 82.19 O
ATOM 13 C1' U B 30 15.330 -8.796 18.386 1.00 82.72 C
ATOM 14 N1 U B 30 15.326 -8.682 19.849 1.00 61.18 N
ATOM 15 C2 U B 30 16.421 -8.081 20.436 1.00 61.66 C
ATOM 16 O2 U B 30 17.347 -7.623 19.791 1.00 60.96 O
ATOM 17 N3 U B 30 16.391 -8.036 21.807 1.00 65.76 N
ATOM 18 C4 U B 30 15.397 -8.513 22.631 1.00 64.47 C
ATOM 19 O4 U B 30 15.515 -8.394 23.852 1.00 64.18 O
ATOM 20 C5 U B 30 14.289 -9.106 21.945 1.00 64.01 C
ATOM 21 C6 U B 30 14.291 -9.166 20.610 1.00 63.86 C
ATOM 22 P C B 31 14.851 -13.544 17.198 1.00 78.25 P
ATOM 23 OP1 C B 31 13.991 -14.195 16.185 1.00 67.22 O
ATOM 24 OP2 C B 31 14.465 -13.594 18.631 1.00 62.27 O
ATOM 25 O5' C B 31 16.329 -14.122 17.064 1.00 77.93 O
TER
Atoms:
OP1: (22.111,-3.640,25.500)
OP2: (19.970,-3.675,24.087)
C3': (22.829,-2.304,20.892)
C1': (23.342,-4.098,19.445)
C5': (23.467,-3.618,22.991)
O4': (23.779,-4.433,20.753)
C8: (21.385,-5.621,20.014)
O2': (24.219,-1.930,18.899)
C6: (19.583,-5.996,17.022)
C5: (20.407,-5.757,18.131)
C4: (21.517,-4.960,17.930)
P: (21.316,-4.216,24.386)
C4': (23.814,-3.240,21.575)
C2': (23.083,-2.593,19.417)
C2: (21.048,-4.694,15.799)
N1: (19.941,-5.443,15.841)
N3: (21.899,-4.391,16.777)
N6: (18.471,-6.729,17.076)
N7: (20.336,-6.174,19.453)
N9: (22.137,-4.866,19.151)
O5': (22.161,-4.184,23.034)
O3': (23.106,-0.946,21.213)
OP2: (19.970,-3.675,24.087)
C3': (22.829,-2.304,20.892)
C1': (23.342,-4.098,19.445)
C5': (23.467,-3.618,22.991)
O4': (23.779,-4.433,20.753)
C8: (21.385,-5.621,20.014)
O2': (24.219,-1.930,18.899)
C6: (19.583,-5.996,17.022)
C5: (20.407,-5.757,18.131)
C4: (21.517,-4.960,17.930)
P: (21.316,-4.216,24.386)
C4': (23.814,-3.240,21.575)
C2': (23.083,-2.593,19.417)
C2: (21.048,-4.694,15.799)
N1: (19.941,-5.443,15.841)
N3: (21.899,-4.391,16.777)
N6: (18.471,-6.729,17.076)
N7: (20.336,-6.174,19.453)
N9: (22.137,-4.866,19.151)
O5': (22.161,-4.184,23.034)
O3': (23.106,-0.946,21.213)
C4: (15.397,-8.513,22.631)
N3: (16.391,-8.036,21.807)
OP1: (9.713,-11.876,17.917)
OP2: (10.411,-11.258,20.314)
C2: (16.421,-8.081,20.436)
C1': (15.330,-8.796,18.386)
C3': (14.730,-10.974,17.683)
O5': (11.959,-10.880,18.405)
O4': (13.992,-8.781,17.915)
C5': (12.304,-10.349,17.132)
P: (10.436,-10.980,18.854)
C4': (13.762,-9.960,17.103)
C2': (15.963,-10.113,17.930)
O2': (16.722,-9.897,16.760)
N1: (15.326,-8.682,19.849)
O4: (15.515,-8.394,23.852)
O2: (17.347,-7.623,19.791)
C6: (14.291,-9.166,20.610)
C5: (14.289,-9.106,21.945)
O3': (15.001,-12.010,16.751)
N3: (16.391,-8.036,21.807)
OP1: (9.713,-11.876,17.917)
OP2: (10.411,-11.258,20.314)
C2: (16.421,-8.081,20.436)
C1': (15.330,-8.796,18.386)
C3': (14.730,-10.974,17.683)
O5': (11.959,-10.880,18.405)
O4': (13.992,-8.781,17.915)
C5': (12.304,-10.349,17.132)
P: (10.436,-10.980,18.854)
C4': (13.762,-9.960,17.103)
C2': (15.963,-10.113,17.930)
O2': (16.722,-9.897,16.760)
N1: (15.326,-8.682,19.849)
O4: (15.515,-8.394,23.852)
O2: (17.347,-7.623,19.791)
C6: (14.291,-9.166,20.610)
C5: (14.289,-9.106,21.945)
O3': (15.001,-12.010,16.751)
Image (generated by PyMOL):