Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11579:11580
Extra
PDB:
ATOM 1 O3' G A1578 -1.905 41.882 167.391 1.00 88.15 O
ATOM 2 P G A1579 -3.418 41.388 167.551 1.00 92.22 P
ATOM 3 OP1 G A1579 -4.182 42.500 168.143 1.00 93.12 O
ATOM 4 OP2 G A1579 -3.386 40.094 168.259 1.00 92.19 O
ATOM 5 O5' G A1579 -3.866 41.164 166.051 1.00 91.27 O
ATOM 6 C5' G A1579 -4.040 42.263 165.186 1.00 91.16 C
ATOM 7 C4' G A1579 -4.328 41.827 163.776 1.00 90.19 C
ATOM 8 O4' G A1579 -3.208 41.061 163.239 1.00 89.41 O
ATOM 9 C3' G A1579 -5.510 40.896 163.570 1.00 89.92 C
ATOM 10 O3' G A1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 11 C2' G A1579 -5.227 40.379 162.170 1.00 88.85 C
ATOM 12 O2' G A1579 -5.540 41.378 161.215 1.00 88.70 O
ATOM 13 C1' G A1579 -3.687 40.194 162.220 1.00 88.56 C
ATOM 14 N9 G A1579 -3.352 38.795 162.564 1.00 88.22 N
ATOM 15 C8 G A1579 -3.093 38.248 163.800 1.00 88.74 C
ATOM 16 N7 G A1579 -2.956 36.947 163.802 1.00 88.27 N
ATOM 17 C5 G A1579 -3.176 36.586 162.474 1.00 87.39 C
ATOM 18 C6 G A1579 -3.175 35.303 161.833 1.00 86.59 C
ATOM 19 O6 G A1579 -2.974 34.175 162.303 1.00 86.47 O
ATOM 20 N1 G A1579 -3.445 35.389 160.477 1.00 85.86 N
ATOM 21 C2 G A1579 -3.683 36.551 159.799 1.00 85.89 C
ATOM 22 N2 G A1579 -3.914 36.396 158.483 1.00 85.12 N
ATOM 23 N3 G A1579 -3.693 37.757 160.371 1.00 86.63 N
ATOM 24 C4 G A1579 -3.436 37.711 161.704 1.00 87.35 C
ATOM 25 P U A1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 26 OP1 U A1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 27 OP2 U A1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 28 O5' U A1580 -8.067 39.396 164.024 1.00 82.46 O
TER
ATOM 1 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 2 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U B1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U B1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U B1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U B1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U B1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U B1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U B1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U B1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U B1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U B1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U B1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U B1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U B1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U B1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U B1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U B1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A B1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A B1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A B1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A B1581 -7.120 35.064 161.238 1.00 77.20 O
TER
ATOM 2 P G A1579 -3.418 41.388 167.551 1.00 92.22 P
ATOM 3 OP1 G A1579 -4.182 42.500 168.143 1.00 93.12 O
ATOM 4 OP2 G A1579 -3.386 40.094 168.259 1.00 92.19 O
ATOM 5 O5' G A1579 -3.866 41.164 166.051 1.00 91.27 O
ATOM 6 C5' G A1579 -4.040 42.263 165.186 1.00 91.16 C
ATOM 7 C4' G A1579 -4.328 41.827 163.776 1.00 90.19 C
ATOM 8 O4' G A1579 -3.208 41.061 163.239 1.00 89.41 O
ATOM 9 C3' G A1579 -5.510 40.896 163.570 1.00 89.92 C
ATOM 10 O3' G A1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 11 C2' G A1579 -5.227 40.379 162.170 1.00 88.85 C
ATOM 12 O2' G A1579 -5.540 41.378 161.215 1.00 88.70 O
ATOM 13 C1' G A1579 -3.687 40.194 162.220 1.00 88.56 C
ATOM 14 N9 G A1579 -3.352 38.795 162.564 1.00 88.22 N
ATOM 15 C8 G A1579 -3.093 38.248 163.800 1.00 88.74 C
ATOM 16 N7 G A1579 -2.956 36.947 163.802 1.00 88.27 N
ATOM 17 C5 G A1579 -3.176 36.586 162.474 1.00 87.39 C
ATOM 18 C6 G A1579 -3.175 35.303 161.833 1.00 86.59 C
ATOM 19 O6 G A1579 -2.974 34.175 162.303 1.00 86.47 O
ATOM 20 N1 G A1579 -3.445 35.389 160.477 1.00 85.86 N
ATOM 21 C2 G A1579 -3.683 36.551 159.799 1.00 85.89 C
ATOM 22 N2 G A1579 -3.914 36.396 158.483 1.00 85.12 N
ATOM 23 N3 G A1579 -3.693 37.757 160.371 1.00 86.63 N
ATOM 24 C4 G A1579 -3.436 37.711 161.704 1.00 87.35 C
ATOM 25 P U A1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 26 OP1 U A1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 27 OP2 U A1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 28 O5' U A1580 -8.067 39.396 164.024 1.00 82.46 O
TER
ATOM 1 O3' G B1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 2 P U B1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U B1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U B1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U B1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U B1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U B1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U B1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U B1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U B1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U B1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U B1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U B1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U B1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U B1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U B1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U B1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U B1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U B1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U B1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U B1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A B1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A B1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A B1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A B1581 -7.120 35.064 161.238 1.00 77.20 O
TER
Atoms:
OP1: (-4.182,42.500,168.143)
OP2: (-3.386,40.094,168.259)
C3': (-5.510,40.896,163.570)
C1': (-3.687,40.194,162.220)
C5': (-4.040,42.263,165.186)
O6: (-2.974,34.175,162.303)
O4': (-3.208,41.061,163.239)
C8: (-3.093,38.248,163.800)
C2: (-3.683,36.551,159.799)
C6: (-3.175,35.303,161.833)
C5: (-3.176,36.586,162.474)
C4: (-3.436,37.711,161.704)
P: (-3.418,41.388,167.551)
C4': (-4.328,41.827,163.776)
C2': (-5.227,40.379,162.170)
O2': (-5.540,41.378,161.215)
N1: (-3.445,35.389,160.477)
N2: (-3.914,36.396,158.483)
N3: (-3.693,37.757,160.371)
N7: (-2.956,36.947,163.802)
N9: (-3.352,38.795,162.564)
O5': (-3.866,41.164,166.051)
O3': (-6.777,41.534,163.698)
OP2: (-3.386,40.094,168.259)
C3': (-5.510,40.896,163.570)
C1': (-3.687,40.194,162.220)
C5': (-4.040,42.263,165.186)
O6: (-2.974,34.175,162.303)
O4': (-3.208,41.061,163.239)
C8: (-3.093,38.248,163.800)
C2: (-3.683,36.551,159.799)
C6: (-3.175,35.303,161.833)
C5: (-3.176,36.586,162.474)
C4: (-3.436,37.711,161.704)
P: (-3.418,41.388,167.551)
C4': (-4.328,41.827,163.776)
C2': (-5.227,40.379,162.170)
O2': (-5.540,41.378,161.215)
N1: (-3.445,35.389,160.477)
N2: (-3.914,36.396,158.483)
N3: (-3.693,37.757,160.371)
N7: (-2.956,36.947,163.802)
N9: (-3.352,38.795,162.564)
O5': (-3.866,41.164,166.051)
O3': (-6.777,41.534,163.698)
C4: (-11.417,40.819,159.591)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
Image (generated by PyMOL):