Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1086:A2016
Extra
PDB:
ATOM 1 O3' C A1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 2 P C A1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 3 OP1 C A1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 4 OP2 C A1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 5 O5' C A1086 47.952 99.949 112.390 1.00 36.97 O
ATOM 6 C5' C A1086 49.277 99.577 112.783 1.00 36.21 C
ATOM 7 C4' C A1086 50.044 100.809 113.140 1.00 35.31 C
ATOM 8 O4' C A1086 50.167 101.668 111.982 1.00 33.57 O
ATOM 9 C3' C A1086 49.293 101.643 114.148 1.00 33.85 C
ATOM 10 O3' C A1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 11 C2' C A1086 49.837 103.041 113.907 1.00 34.74 C
ATOM 12 O2' C A1086 51.050 103.316 114.588 1.00 33.70 O
ATOM 13 C1' C A1086 50.072 103.016 112.394 1.00 33.01 C
ATOM 14 N1 C A1086 49.025 103.669 111.605 1.00 33.58 N
ATOM 15 C2 C A1086 48.835 105.064 111.729 1.00 33.50 C
ATOM 16 O2 C A1086 49.481 105.693 112.581 1.00 32.26 O
ATOM 17 N3 C A1086 47.941 105.675 110.919 1.00 33.24 N
ATOM 18 C4 C A1086 47.245 104.951 110.036 1.00 33.46 C
ATOM 19 N4 C A1086 46.421 105.592 109.207 1.00 33.63 N
ATOM 20 C5 C A1086 47.377 103.535 109.945 1.00 33.13 C
ATOM 21 C6 C A1086 48.263 102.944 110.736 1.00 32.69 C
ATOM 22 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 23 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 24 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 25 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
TER
ATOM 1 O3' U B2015 42.219 108.559 110.284 1.00 28.79 O
ATOM 2 P G B2016 43.412 107.822 109.496 1.00 28.68 P
ATOM 3 OP1 G B2016 42.975 106.407 109.316 1.00 29.52 O
ATOM 4 OP2 G B2016 44.660 108.111 110.233 1.00 28.19 O
ATOM 5 O5' G B2016 43.483 108.564 108.085 1.00 26.05 O
ATOM 6 C5' G B2016 42.474 108.354 107.066 1.00 23.10 C
ATOM 7 C4' G B2016 42.643 109.355 105.944 1.00 21.77 C
ATOM 8 O4' G B2016 42.506 110.713 106.439 1.00 22.22 O
ATOM 9 C3' G B2016 43.983 109.320 105.237 1.00 21.91 C
ATOM 10 O3' G B2016 43.936 108.291 104.246 1.00 22.84 O
ATOM 11 C2' G B2016 44.095 110.737 104.668 1.00 21.79 C
ATOM 12 O2' G B2016 43.419 110.922 103.441 1.00 22.45 O
ATOM 13 C1' G B2016 43.374 111.564 105.728 1.00 22.84 C
ATOM 14 N9 G B2016 44.332 112.154 106.651 1.00 24.62 N
ATOM 15 C8 G B2016 44.839 111.590 107.799 1.00 25.13 C
ATOM 16 N7 G B2016 45.738 112.331 108.380 1.00 25.61 N
ATOM 17 C5 G B2016 45.816 113.465 107.573 1.00 24.47 C
ATOM 18 C6 G B2016 46.623 114.609 107.686 1.00 24.81 C
ATOM 19 O6 G B2016 47.462 114.853 108.549 1.00 27.63 O
ATOM 20 N1 G B2016 46.384 115.514 106.647 1.00 22.10 N
ATOM 21 C2 G B2016 45.489 115.321 105.626 1.00 19.68 C
ATOM 22 N2 G B2016 45.409 116.292 104.705 1.00 22.14 N
ATOM 23 N3 G B2016 44.734 114.257 105.511 1.00 19.95 N
ATOM 24 C4 G B2016 44.946 113.373 106.509 1.00 23.33 C
ATOM 25 P C B2017 45.168 107.279 104.066 1.00 23.00 P
ATOM 26 OP1 C B2017 44.731 106.251 103.119 1.00 23.50 O
ATOM 27 OP2 C B2017 45.716 106.875 105.372 1.00 23.05 O
ATOM 28 O5' C B2017 46.270 108.152 103.352 1.00 23.81 O
TER
ATOM 2 P C A1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 3 OP1 C A1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 4 OP2 C A1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 5 O5' C A1086 47.952 99.949 112.390 1.00 36.97 O
ATOM 6 C5' C A1086 49.277 99.577 112.783 1.00 36.21 C
ATOM 7 C4' C A1086 50.044 100.809 113.140 1.00 35.31 C
ATOM 8 O4' C A1086 50.167 101.668 111.982 1.00 33.57 O
ATOM 9 C3' C A1086 49.293 101.643 114.148 1.00 33.85 C
ATOM 10 O3' C A1086 49.553 101.155 115.441 1.00 35.66 O
ATOM 11 C2' C A1086 49.837 103.041 113.907 1.00 34.74 C
ATOM 12 O2' C A1086 51.050 103.316 114.588 1.00 33.70 O
ATOM 13 C1' C A1086 50.072 103.016 112.394 1.00 33.01 C
ATOM 14 N1 C A1086 49.025 103.669 111.605 1.00 33.58 N
ATOM 15 C2 C A1086 48.835 105.064 111.729 1.00 33.50 C
ATOM 16 O2 C A1086 49.481 105.693 112.581 1.00 32.26 O
ATOM 17 N3 C A1086 47.941 105.675 110.919 1.00 33.24 N
ATOM 18 C4 C A1086 47.245 104.951 110.036 1.00 33.46 C
ATOM 19 N4 C A1086 46.421 105.592 109.207 1.00 33.63 N
ATOM 20 C5 C A1086 47.377 103.535 109.945 1.00 33.13 C
ATOM 21 C6 C A1086 48.263 102.944 110.736 1.00 32.69 C
ATOM 22 P U A1087 48.346 100.930 116.459 1.00 35.49 P
ATOM 23 OP1 U A1087 48.974 100.888 117.773 1.00 35.88 O
ATOM 24 OP2 U A1087 47.556 99.761 115.989 1.00 36.48 O
ATOM 25 O5' U A1087 47.481 102.257 116.318 1.00 36.26 O
TER
ATOM 1 O3' U B2015 42.219 108.559 110.284 1.00 28.79 O
ATOM 2 P G B2016 43.412 107.822 109.496 1.00 28.68 P
ATOM 3 OP1 G B2016 42.975 106.407 109.316 1.00 29.52 O
ATOM 4 OP2 G B2016 44.660 108.111 110.233 1.00 28.19 O
ATOM 5 O5' G B2016 43.483 108.564 108.085 1.00 26.05 O
ATOM 6 C5' G B2016 42.474 108.354 107.066 1.00 23.10 C
ATOM 7 C4' G B2016 42.643 109.355 105.944 1.00 21.77 C
ATOM 8 O4' G B2016 42.506 110.713 106.439 1.00 22.22 O
ATOM 9 C3' G B2016 43.983 109.320 105.237 1.00 21.91 C
ATOM 10 O3' G B2016 43.936 108.291 104.246 1.00 22.84 O
ATOM 11 C2' G B2016 44.095 110.737 104.668 1.00 21.79 C
ATOM 12 O2' G B2016 43.419 110.922 103.441 1.00 22.45 O
ATOM 13 C1' G B2016 43.374 111.564 105.728 1.00 22.84 C
ATOM 14 N9 G B2016 44.332 112.154 106.651 1.00 24.62 N
ATOM 15 C8 G B2016 44.839 111.590 107.799 1.00 25.13 C
ATOM 16 N7 G B2016 45.738 112.331 108.380 1.00 25.61 N
ATOM 17 C5 G B2016 45.816 113.465 107.573 1.00 24.47 C
ATOM 18 C6 G B2016 46.623 114.609 107.686 1.00 24.81 C
ATOM 19 O6 G B2016 47.462 114.853 108.549 1.00 27.63 O
ATOM 20 N1 G B2016 46.384 115.514 106.647 1.00 22.10 N
ATOM 21 C2 G B2016 45.489 115.321 105.626 1.00 19.68 C
ATOM 22 N2 G B2016 45.409 116.292 104.705 1.00 22.14 N
ATOM 23 N3 G B2016 44.734 114.257 105.511 1.00 19.95 N
ATOM 24 C4 G B2016 44.946 113.373 106.509 1.00 23.33 C
ATOM 25 P C B2017 45.168 107.279 104.066 1.00 23.00 P
ATOM 26 OP1 C B2017 44.731 106.251 103.119 1.00 23.50 O
ATOM 27 OP2 C B2017 45.716 106.875 105.372 1.00 23.05 O
ATOM 28 O5' C B2017 46.270 108.152 103.352 1.00 23.81 O
TER
Atoms:
C2: (48.835,105.064,111.729)
OP1: (47.008,99.819,110.144)
OP2: (47.692,97.685,111.381)
C4: (47.245,104.951,110.036)
O5': (47.952,99.949,112.390)
C3': (49.293,101.643,114.148)
C1': (50.072,103.016,112.394)
O4': (50.167,101.668,111.982)
C5': (49.277,99.577,112.783)
P: (47.109,99.049,111.399)
O2: (49.481,105.693,112.581)
C4': (50.044,100.809,113.140)
C2': (49.837,103.041,113.907)
O2': (51.050,103.316,114.588)
N1: (49.025,103.669,111.605)
N3: (47.941,105.675,110.919)
N4: (46.421,105.592,109.207)
C6: (48.263,102.944,110.736)
C5: (47.377,103.535,109.945)
O3': (49.553,101.155,115.441)
OP1: (47.008,99.819,110.144)
OP2: (47.692,97.685,111.381)
C4: (47.245,104.951,110.036)
O5': (47.952,99.949,112.390)
C3': (49.293,101.643,114.148)
C1': (50.072,103.016,112.394)
O4': (50.167,101.668,111.982)
C5': (49.277,99.577,112.783)
P: (47.109,99.049,111.399)
O2: (49.481,105.693,112.581)
C4': (50.044,100.809,113.140)
C2': (49.837,103.041,113.907)
O2': (51.050,103.316,114.588)
N1: (49.025,103.669,111.605)
N3: (47.941,105.675,110.919)
N4: (46.421,105.592,109.207)
C6: (48.263,102.944,110.736)
C5: (47.377,103.535,109.945)
O3': (49.553,101.155,115.441)
OP1: (42.975,106.407,109.316)
OP2: (44.660,108.111,110.233)
C3': (43.983,109.320,105.237)
C1': (43.374,111.564,105.728)
C5': (42.474,108.354,107.066)
O6: (47.462,114.853,108.549)
O4': (42.506,110.713,106.439)
C8: (44.839,111.590,107.799)
C2: (45.489,115.321,105.626)
C6: (46.623,114.609,107.686)
C5: (45.816,113.465,107.573)
C4: (44.946,113.373,106.509)
P: (43.412,107.822,109.496)
C4': (42.643,109.355,105.944)
C2': (44.095,110.737,104.668)
O2': (43.419,110.922,103.441)
N1: (46.384,115.514,106.647)
N2: (45.409,116.292,104.705)
N3: (44.734,114.257,105.511)
N7: (45.738,112.331,108.380)
N9: (44.332,112.154,106.651)
O5': (43.483,108.564,108.085)
O3': (43.936,108.291,104.246)
OP2: (44.660,108.111,110.233)
C3': (43.983,109.320,105.237)
C1': (43.374,111.564,105.728)
C5': (42.474,108.354,107.066)
O6: (47.462,114.853,108.549)
O4': (42.506,110.713,106.439)
C8: (44.839,111.590,107.799)
C2: (45.489,115.321,105.626)
C6: (46.623,114.609,107.686)
C5: (45.816,113.465,107.573)
C4: (44.946,113.373,106.509)
P: (43.412,107.822,109.496)
C4': (42.643,109.355,105.944)
C2': (44.095,110.737,104.668)
O2': (43.419,110.922,103.441)
N1: (46.384,115.514,106.647)
N2: (45.409,116.292,104.705)
N3: (44.734,114.257,105.511)
N7: (45.738,112.331,108.380)
N9: (44.332,112.154,106.651)
O5': (43.483,108.564,108.085)
O3': (43.936,108.291,104.246)
Image (generated by PyMOL):