Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1012:A2154
Extra
PDB:
ATOM 1 O3' G A1011 56.824 80.360 108.211 1.00 36.89 O
ATOM 2 P G A1012 57.967 80.848 109.204 1.00 35.84 P
ATOM 3 OP1 G A1012 58.530 79.616 109.777 1.00 38.16 O
ATOM 4 OP2 G A1012 57.477 81.920 110.109 1.00 35.62 O
ATOM 5 O5' G A1012 59.046 81.471 108.217 1.00 37.11 O
ATOM 6 C5' G A1012 59.977 80.625 107.557 1.00 37.12 C
ATOM 7 C4' G A1012 60.878 81.428 106.674 1.00 37.30 C
ATOM 8 O4' G A1012 60.106 81.982 105.588 1.00 37.02 O
ATOM 9 C3' G A1012 61.516 82.643 107.314 1.00 37.75 C
ATOM 10 O3' G A1012 62.637 82.297 108.125 1.00 39.86 O
ATOM 11 C2' G A1012 61.892 83.452 106.084 1.00 38.15 C
ATOM 12 O2' G A1012 63.011 82.942 105.394 1.00 40.14 O
ATOM 13 C1' G A1012 60.661 83.230 105.209 1.00 37.93 C
ATOM 14 N9 G A1012 59.706 84.276 105.526 1.00 37.73 N
ATOM 15 C8 G A1012 58.598 84.169 106.318 1.00 37.80 C
ATOM 16 N7 G A1012 57.996 85.308 106.506 1.00 38.23 N
ATOM 17 C5 G A1012 58.742 86.214 105.772 1.00 37.37 C
ATOM 18 C6 G A1012 58.583 87.590 105.610 1.00 37.73 C
ATOM 19 O6 G A1012 57.739 88.319 106.124 1.00 38.59 O
ATOM 20 N1 G A1012 59.547 88.125 104.757 1.00 36.08 N
ATOM 21 C2 G A1012 60.549 87.415 104.153 1.00 35.38 C
ATOM 22 N2 G A1012 61.361 88.097 103.332 1.00 35.00 N
ATOM 23 N3 G A1012 60.731 86.125 104.331 1.00 37.13 N
ATOM 24 C4 G A1012 59.787 85.589 105.141 1.00 37.73 C
ATOM 25 P G A1013 63.058 83.235 109.372 1.00 40.51 P
ATOM 26 OP1 G A1013 64.161 82.537 110.054 1.00 39.23 O
ATOM 27 OP2 G A1013 61.884 83.662 110.159 1.00 40.36 O
ATOM 28 O5' G A1013 63.628 84.525 108.652 1.00 38.63 O
TER
ATOM 1 O3' A B2153 62.585 85.974 93.710 1.00 38.36 O
ATOM 2 P U B2154 64.176 85.687 93.799 1.00 39.35 P
ATOM 3 OP1 U B2154 64.849 86.160 92.564 1.00 37.17 O
ATOM 4 OP2 U B2154 64.319 84.280 94.204 1.00 41.01 O
ATOM 5 O5' U B2154 64.680 86.581 95.015 1.00 38.85 O
ATOM 6 C5' U B2154 64.474 87.996 95.022 1.00 39.66 C
ATOM 7 C4' U B2154 64.551 88.508 96.425 1.00 39.59 C
ATOM 8 O4' U B2154 63.511 87.913 97.233 1.00 39.40 O
ATOM 9 C3' U B2154 65.827 88.098 97.121 1.00 40.22 C
ATOM 10 O3' U B2154 66.892 88.943 96.674 1.00 39.66 O
ATOM 11 C2' U B2154 65.438 88.259 98.583 1.00 39.69 C
ATOM 12 O2' U B2154 65.437 89.613 98.962 1.00 40.64 O
ATOM 13 C1' U B2154 63.977 87.790 98.559 1.00 39.14 C
ATOM 14 N1 U B2154 63.766 86.406 99.010 1.00 38.51 N
ATOM 15 C2 U B2154 63.345 86.213 100.319 1.00 39.37 C
ATOM 16 O2 U B2154 63.055 87.131 101.071 1.00 40.66 O
ATOM 17 N3 U B2154 63.259 84.903 100.711 1.00 38.82 N
ATOM 18 C4 U B2154 63.522 83.786 99.946 1.00 39.74 C
ATOM 19 O4 U B2154 63.647 82.703 100.508 1.00 40.63 O
ATOM 20 C5 U B2154 63.881 84.064 98.590 1.00 39.50 C
ATOM 21 C6 U B2154 63.996 85.334 98.180 1.00 38.50 C
ATOM 22 P C B2155 67.931 88.388 95.589 1.00 39.26 P
ATOM 23 OP1 C B2155 67.882 89.222 94.361 1.00 38.31 O
ATOM 24 OP2 C B2155 67.773 86.932 95.472 1.00 37.67 O
ATOM 25 O5' C B2155 69.335 88.650 96.271 1.00 38.86 O
TER
ATOM 2 P G A1012 57.967 80.848 109.204 1.00 35.84 P
ATOM 3 OP1 G A1012 58.530 79.616 109.777 1.00 38.16 O
ATOM 4 OP2 G A1012 57.477 81.920 110.109 1.00 35.62 O
ATOM 5 O5' G A1012 59.046 81.471 108.217 1.00 37.11 O
ATOM 6 C5' G A1012 59.977 80.625 107.557 1.00 37.12 C
ATOM 7 C4' G A1012 60.878 81.428 106.674 1.00 37.30 C
ATOM 8 O4' G A1012 60.106 81.982 105.588 1.00 37.02 O
ATOM 9 C3' G A1012 61.516 82.643 107.314 1.00 37.75 C
ATOM 10 O3' G A1012 62.637 82.297 108.125 1.00 39.86 O
ATOM 11 C2' G A1012 61.892 83.452 106.084 1.00 38.15 C
ATOM 12 O2' G A1012 63.011 82.942 105.394 1.00 40.14 O
ATOM 13 C1' G A1012 60.661 83.230 105.209 1.00 37.93 C
ATOM 14 N9 G A1012 59.706 84.276 105.526 1.00 37.73 N
ATOM 15 C8 G A1012 58.598 84.169 106.318 1.00 37.80 C
ATOM 16 N7 G A1012 57.996 85.308 106.506 1.00 38.23 N
ATOM 17 C5 G A1012 58.742 86.214 105.772 1.00 37.37 C
ATOM 18 C6 G A1012 58.583 87.590 105.610 1.00 37.73 C
ATOM 19 O6 G A1012 57.739 88.319 106.124 1.00 38.59 O
ATOM 20 N1 G A1012 59.547 88.125 104.757 1.00 36.08 N
ATOM 21 C2 G A1012 60.549 87.415 104.153 1.00 35.38 C
ATOM 22 N2 G A1012 61.361 88.097 103.332 1.00 35.00 N
ATOM 23 N3 G A1012 60.731 86.125 104.331 1.00 37.13 N
ATOM 24 C4 G A1012 59.787 85.589 105.141 1.00 37.73 C
ATOM 25 P G A1013 63.058 83.235 109.372 1.00 40.51 P
ATOM 26 OP1 G A1013 64.161 82.537 110.054 1.00 39.23 O
ATOM 27 OP2 G A1013 61.884 83.662 110.159 1.00 40.36 O
ATOM 28 O5' G A1013 63.628 84.525 108.652 1.00 38.63 O
TER
ATOM 1 O3' A B2153 62.585 85.974 93.710 1.00 38.36 O
ATOM 2 P U B2154 64.176 85.687 93.799 1.00 39.35 P
ATOM 3 OP1 U B2154 64.849 86.160 92.564 1.00 37.17 O
ATOM 4 OP2 U B2154 64.319 84.280 94.204 1.00 41.01 O
ATOM 5 O5' U B2154 64.680 86.581 95.015 1.00 38.85 O
ATOM 6 C5' U B2154 64.474 87.996 95.022 1.00 39.66 C
ATOM 7 C4' U B2154 64.551 88.508 96.425 1.00 39.59 C
ATOM 8 O4' U B2154 63.511 87.913 97.233 1.00 39.40 O
ATOM 9 C3' U B2154 65.827 88.098 97.121 1.00 40.22 C
ATOM 10 O3' U B2154 66.892 88.943 96.674 1.00 39.66 O
ATOM 11 C2' U B2154 65.438 88.259 98.583 1.00 39.69 C
ATOM 12 O2' U B2154 65.437 89.613 98.962 1.00 40.64 O
ATOM 13 C1' U B2154 63.977 87.790 98.559 1.00 39.14 C
ATOM 14 N1 U B2154 63.766 86.406 99.010 1.00 38.51 N
ATOM 15 C2 U B2154 63.345 86.213 100.319 1.00 39.37 C
ATOM 16 O2 U B2154 63.055 87.131 101.071 1.00 40.66 O
ATOM 17 N3 U B2154 63.259 84.903 100.711 1.00 38.82 N
ATOM 18 C4 U B2154 63.522 83.786 99.946 1.00 39.74 C
ATOM 19 O4 U B2154 63.647 82.703 100.508 1.00 40.63 O
ATOM 20 C5 U B2154 63.881 84.064 98.590 1.00 39.50 C
ATOM 21 C6 U B2154 63.996 85.334 98.180 1.00 38.50 C
ATOM 22 P C B2155 67.931 88.388 95.589 1.00 39.26 P
ATOM 23 OP1 C B2155 67.882 89.222 94.361 1.00 38.31 O
ATOM 24 OP2 C B2155 67.773 86.932 95.472 1.00 37.67 O
ATOM 25 O5' C B2155 69.335 88.650 96.271 1.00 38.86 O
TER
Atoms:
OP1: (58.530,79.616,109.777)
OP2: (57.477,81.920,110.109)
C3': (61.516,82.643,107.314)
C1': (60.661,83.230,105.209)
C5': (59.977,80.625,107.557)
O6: (57.739,88.319,106.124)
O4': (60.106,81.982,105.588)
C8: (58.598,84.169,106.318)
C2: (60.549,87.415,104.153)
C6: (58.583,87.590,105.610)
C5: (58.742,86.214,105.772)
C4: (59.787,85.589,105.141)
P: (57.967,80.848,109.204)
C4': (60.878,81.428,106.674)
C2': (61.892,83.452,106.084)
O2': (63.011,82.942,105.394)
N1: (59.547,88.125,104.757)
N2: (61.361,88.097,103.332)
N3: (60.731,86.125,104.331)
N7: (57.996,85.308,106.506)
N9: (59.706,84.276,105.526)
O5': (59.046,81.471,108.217)
O3': (62.637,82.297,108.125)
OP2: (57.477,81.920,110.109)
C3': (61.516,82.643,107.314)
C1': (60.661,83.230,105.209)
C5': (59.977,80.625,107.557)
O6: (57.739,88.319,106.124)
O4': (60.106,81.982,105.588)
C8: (58.598,84.169,106.318)
C2: (60.549,87.415,104.153)
C6: (58.583,87.590,105.610)
C5: (58.742,86.214,105.772)
C4: (59.787,85.589,105.141)
P: (57.967,80.848,109.204)
C4': (60.878,81.428,106.674)
C2': (61.892,83.452,106.084)
O2': (63.011,82.942,105.394)
N1: (59.547,88.125,104.757)
N2: (61.361,88.097,103.332)
N3: (60.731,86.125,104.331)
N7: (57.996,85.308,106.506)
N9: (59.706,84.276,105.526)
O5': (59.046,81.471,108.217)
O3': (62.637,82.297,108.125)
C4: (63.522,83.786,99.946)
N3: (63.259,84.903,100.711)
OP1: (64.849,86.160,92.564)
OP2: (64.319,84.280,94.204)
C2: (63.345,86.213,100.319)
C1': (63.977,87.790,98.559)
C3': (65.827,88.098,97.121)
O5': (64.680,86.581,95.015)
O4': (63.511,87.913,97.233)
C5': (64.474,87.996,95.022)
P: (64.176,85.687,93.799)
C4': (64.551,88.508,96.425)
C2': (65.438,88.259,98.583)
O2': (65.437,89.613,98.962)
N1: (63.766,86.406,99.010)
O4: (63.647,82.703,100.508)
O2: (63.055,87.131,101.071)
C6: (63.996,85.334,98.180)
C5: (63.881,84.064,98.590)
O3': (66.892,88.943,96.674)
N3: (63.259,84.903,100.711)
OP1: (64.849,86.160,92.564)
OP2: (64.319,84.280,94.204)
C2: (63.345,86.213,100.319)
C1': (63.977,87.790,98.559)
C3': (65.827,88.098,97.121)
O5': (64.680,86.581,95.015)
O4': (63.511,87.913,97.233)
C5': (64.474,87.996,95.022)
P: (64.176,85.687,93.799)
C4': (64.551,88.508,96.425)
C2': (65.438,88.259,98.583)
O2': (65.437,89.613,98.962)
N1: (63.766,86.406,99.010)
O4: (63.647,82.703,100.508)
O2: (63.055,87.131,101.071)
C6: (63.996,85.334,98.180)
C5: (63.881,84.064,98.590)
O3': (66.892,88.943,96.674)
Image (generated by PyMOL):