Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1086:A2016
Extra
PDB:
ATOM 1 O3' C A1085 45.656 99.352 112.124 1.00 40.84 O
ATOM 2 P C A1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C A1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C A1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C A1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C A1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C A1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C A1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C A1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C A1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C A1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C A1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C A1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C A1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C A1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C A1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C A1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C A1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C A1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C A1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C A1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U A1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U A1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U A1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U A1087 47.527 102.512 116.358 1.00 43.86 O
TER
ATOM 1 O3' U B2015 42.500 108.906 110.324 1.00 31.43 O
ATOM 2 P G B2016 43.703 108.274 109.483 1.00 30.95 P
ATOM 3 OP1 G B2016 43.300 106.867 109.299 1.00 31.12 O
ATOM 4 OP2 G B2016 44.976 108.591 110.171 1.00 30.85 O
ATOM 5 O5' G B2016 43.641 109.041 108.089 1.00 29.71 O
ATOM 6 C5' G B2016 42.630 108.716 107.096 1.00 27.88 C
ATOM 7 C4' G B2016 42.744 109.640 105.906 1.00 26.93 C
ATOM 8 O4' G B2016 42.577 111.011 106.338 1.00 27.33 O
ATOM 9 C3' G B2016 44.103 109.589 105.244 1.00 25.97 C
ATOM 10 O3' G B2016 44.059 108.539 104.279 1.00 27.36 O
ATOM 11 C2' G B2016 44.242 110.982 104.641 1.00 25.80 C
ATOM 12 O2' G B2016 43.600 111.081 103.389 1.00 26.26 O
ATOM 13 C1' G B2016 43.485 111.841 105.654 1.00 27.07 C
ATOM 14 N9 G B2016 44.387 112.450 106.624 1.00 28.68 N
ATOM 15 C8 G B2016 44.862 111.903 107.795 1.00 29.06 C
ATOM 16 N7 G B2016 45.748 112.654 108.385 1.00 29.14 N
ATOM 17 C5 G B2016 45.842 113.773 107.564 1.00 27.98 C
ATOM 18 C6 G B2016 46.655 114.907 107.665 1.00 28.60 C
ATOM 19 O6 G B2016 47.518 115.144 108.510 1.00 32.65 O
ATOM 20 N1 G B2016 46.410 115.817 106.630 1.00 25.21 N
ATOM 21 C2 G B2016 45.512 115.630 105.619 1.00 24.10 C
ATOM 22 N2 G B2016 45.406 116.607 104.721 1.00 26.67 N
ATOM 23 N3 G B2016 44.768 114.558 105.498 1.00 25.18 N
ATOM 24 C4 G B2016 44.982 113.675 106.498 1.00 27.23 C
ATOM 25 P C B2017 45.300 107.543 104.117 1.00 28.39 P
ATOM 26 OP1 C B2017 44.944 106.467 103.192 1.00 27.89 O
ATOM 27 OP2 C B2017 45.818 107.221 105.456 1.00 28.40 O
ATOM 28 O5' C B2017 46.378 108.419 103.383 1.00 26.97 O
TER
ATOM 2 P C A1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C A1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C A1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C A1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C A1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C A1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C A1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C A1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C A1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C A1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C A1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C A1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C A1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C A1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C A1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C A1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C A1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C A1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C A1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C A1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U A1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U A1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U A1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U A1087 47.527 102.512 116.358 1.00 43.86 O
TER
ATOM 1 O3' U B2015 42.500 108.906 110.324 1.00 31.43 O
ATOM 2 P G B2016 43.703 108.274 109.483 1.00 30.95 P
ATOM 3 OP1 G B2016 43.300 106.867 109.299 1.00 31.12 O
ATOM 4 OP2 G B2016 44.976 108.591 110.171 1.00 30.85 O
ATOM 5 O5' G B2016 43.641 109.041 108.089 1.00 29.71 O
ATOM 6 C5' G B2016 42.630 108.716 107.096 1.00 27.88 C
ATOM 7 C4' G B2016 42.744 109.640 105.906 1.00 26.93 C
ATOM 8 O4' G B2016 42.577 111.011 106.338 1.00 27.33 O
ATOM 9 C3' G B2016 44.103 109.589 105.244 1.00 25.97 C
ATOM 10 O3' G B2016 44.059 108.539 104.279 1.00 27.36 O
ATOM 11 C2' G B2016 44.242 110.982 104.641 1.00 25.80 C
ATOM 12 O2' G B2016 43.600 111.081 103.389 1.00 26.26 O
ATOM 13 C1' G B2016 43.485 111.841 105.654 1.00 27.07 C
ATOM 14 N9 G B2016 44.387 112.450 106.624 1.00 28.68 N
ATOM 15 C8 G B2016 44.862 111.903 107.795 1.00 29.06 C
ATOM 16 N7 G B2016 45.748 112.654 108.385 1.00 29.14 N
ATOM 17 C5 G B2016 45.842 113.773 107.564 1.00 27.98 C
ATOM 18 C6 G B2016 46.655 114.907 107.665 1.00 28.60 C
ATOM 19 O6 G B2016 47.518 115.144 108.510 1.00 32.65 O
ATOM 20 N1 G B2016 46.410 115.817 106.630 1.00 25.21 N
ATOM 21 C2 G B2016 45.512 115.630 105.619 1.00 24.10 C
ATOM 22 N2 G B2016 45.406 116.607 104.721 1.00 26.67 N
ATOM 23 N3 G B2016 44.768 114.558 105.498 1.00 25.18 N
ATOM 24 C4 G B2016 44.982 113.675 106.498 1.00 27.23 C
ATOM 25 P C B2017 45.300 107.543 104.117 1.00 28.39 P
ATOM 26 OP1 C B2017 44.944 106.467 103.192 1.00 27.89 O
ATOM 27 OP2 C B2017 45.818 107.221 105.456 1.00 28.40 O
ATOM 28 O5' C B2017 46.378 108.419 103.383 1.00 26.97 O
TER
Atoms:
C2: (48.948,105.383,111.664)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
OP1: (43.300,106.867,109.299)
OP2: (44.976,108.591,110.171)
C3': (44.103,109.589,105.244)
C1': (43.485,111.841,105.654)
C5': (42.630,108.716,107.096)
O6: (47.518,115.144,108.510)
O4': (42.577,111.011,106.338)
C8: (44.862,111.903,107.795)
C2: (45.512,115.630,105.619)
C6: (46.655,114.907,107.665)
C5: (45.842,113.773,107.564)
C4: (44.982,113.675,106.498)
P: (43.703,108.274,109.483)
C4': (42.744,109.640,105.906)
C2': (44.242,110.982,104.641)
O2': (43.600,111.081,103.389)
N1: (46.410,115.817,106.630)
N2: (45.406,116.607,104.721)
N3: (44.768,114.558,105.498)
N7: (45.748,112.654,108.385)
N9: (44.387,112.450,106.624)
O5': (43.641,109.041,108.089)
O3': (44.059,108.539,104.279)
OP2: (44.976,108.591,110.171)
C3': (44.103,109.589,105.244)
C1': (43.485,111.841,105.654)
C5': (42.630,108.716,107.096)
O6: (47.518,115.144,108.510)
O4': (42.577,111.011,106.338)
C8: (44.862,111.903,107.795)
C2: (45.512,115.630,105.619)
C6: (46.655,114.907,107.665)
C5: (45.842,113.773,107.564)
C4: (44.982,113.675,106.498)
P: (43.703,108.274,109.483)
C4': (42.744,109.640,105.906)
C2': (44.242,110.982,104.641)
O2': (43.600,111.081,103.389)
N1: (46.410,115.817,106.630)
N2: (45.406,116.607,104.721)
N3: (44.768,114.558,105.498)
N7: (45.748,112.654,108.385)
N9: (44.387,112.450,106.624)
O5': (43.641,109.041,108.089)
O3': (44.059,108.539,104.279)
Image (generated by PyMOL):