ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M90:A1086:A2016

Extra

PDB:
ATOM 1 O3' C A1085 45.330 98.657 111.571 1.00 45.27 O
ATOM 2 P C A1086 46.775 98.587 110.870 1.00 45.72 P
ATOM 3 OP1 C A1086 46.648 99.281 109.563 1.00 46.02 O
ATOM 4 OP2 C A1086 47.290 97.191 110.911 1.00 45.14 O
ATOM 5 O5' C A1086 47.679 99.487 111.819 1.00 44.86 O
ATOM 6 C5' C A1086 49.051 99.164 112.077 1.00 41.64 C
ATOM 7 C4' C A1086 49.787 100.407 112.489 1.00 40.30 C
ATOM 8 O4' C A1086 49.966 101.248 111.325 1.00 39.21 O
ATOM 9 C3' C A1086 49.066 101.281 113.505 1.00 39.78 C
ATOM 10 O3' C A1086 49.322 100.836 114.846 1.00 41.81 O
ATOM 11 C2' C A1086 49.672 102.653 113.226 1.00 39.44 C
ATOM 12 O2' C A1086 50.930 102.834 113.845 1.00 39.51 O
ATOM 13 C1' C A1086 49.860 102.609 111.702 1.00 37.85 C
ATOM 14 N1 C A1086 48.778 103.229 110.905 1.00 37.75 N
ATOM 15 C2 C A1086 48.455 104.575 111.119 1.00 37.34 C
ATOM 16 O2 C A1086 49.091 105.220 111.966 1.00 40.31 O
ATOM 17 N3 C A1086 47.459 105.138 110.393 1.00 36.42 N
ATOM 18 C4 C A1086 46.804 104.413 109.482 1.00 34.91 C
ATOM 19 N4 C A1086 45.829 105.002 108.795 1.00 34.40 N
ATOM 20 C5 C A1086 47.118 103.048 109.238 1.00 35.23 C
ATOM 21 C6 C A1086 48.098 102.501 109.965 1.00 36.65 C
ATOM 22 P U A1087 48.108 100.624 115.882 1.00 41.66 P
ATOM 23 OP1 U A1087 48.677 100.657 117.253 1.00 41.30 O
ATOM 24 OP2 U A1087 47.328 99.445 115.449 1.00 41.02 O
ATOM 25 O5' U A1087 47.215 101.925 115.692 1.00 41.64 O
TER

ATOM 1 O3' U B2015 42.065 108.119 109.728 1.00 29.51 O
ATOM 2 P G B2016 43.274 107.445 108.917 1.00 28.00 P
ATOM 3 OP1 G B2016 42.916 106.016 108.771 1.00 29.85 O
ATOM 4 OP2 G B2016 44.551 107.809 109.568 1.00 27.73 O
ATOM 5 O5' G B2016 43.231 108.154 107.488 1.00 27.81 O
ATOM 6 C5' G B2016 42.094 108.024 106.608 1.00 25.43 C
ATOM 7 C4' G B2016 42.225 108.980 105.444 1.00 25.80 C
ATOM 8 O4' G B2016 42.190 110.348 105.926 1.00 26.69 O
ATOM 9 C3' G B2016 43.537 108.882 104.694 1.00 26.92 C
ATOM 10 O3' G B2016 43.504 107.827 103.748 1.00 28.31 O
ATOM 11 C2' G B2016 43.665 110.261 104.062 1.00 27.41 C
ATOM 12 O2' G B2016 42.895 110.440 102.901 1.00 28.94 O
ATOM 13 C1' G B2016 43.073 111.147 105.155 1.00 28.87 C
ATOM 14 N9 G B2016 44.087 111.715 106.039 1.00 29.88 N
ATOM 15 C8 G B2016 44.645 111.127 107.148 1.00 29.34 C
ATOM 16 N7 G B2016 45.546 111.874 107.723 1.00 29.76 N
ATOM 17 C5 G B2016 45.585 113.026 106.952 1.00 29.60 C
ATOM 18 C6 G B2016 46.380 114.195 107.087 1.00 29.96 C
ATOM 19 O6 G B2016 47.242 114.444 107.931 1.00 31.81 O
ATOM 20 N1 G B2016 46.091 115.126 106.100 1.00 27.83 N
ATOM 21 C2 G B2016 45.164 114.953 105.109 1.00 27.47 C
ATOM 22 N2 G B2016 45.027 115.964 104.269 1.00 26.60 N
ATOM 23 N3 G B2016 44.426 113.868 104.959 1.00 27.45 N
ATOM 24 C4 G B2016 44.685 112.950 105.913 1.00 29.38 C
ATOM 25 P C B2017 44.776 106.857 103.585 1.00 29.68 P
ATOM 26 OP1 C B2017 44.365 105.809 102.637 1.00 27.02 O
ATOM 27 OP2 C B2017 45.270 106.471 104.940 1.00 31.28 O
ATOM 28 O5' C B2017 45.881 107.752 102.862 1.00 30.76 O
TER

Atoms:
C2: (48.455,104.575,111.119)
OP1: (46.648,99.281,109.563)
OP2: (47.290,97.191,110.911)
C4: (46.804,104.413,109.482)
O5': (47.679,99.487,111.819)
C3': (49.066,101.281,113.505)
C1': (49.860,102.609,111.702)
O4': (49.966,101.248,111.325)
C5': (49.051,99.164,112.077)
P: (46.775,98.587,110.870)
O2: (49.091,105.220,111.966)
C4': (49.787,100.407,112.489)
C2': (49.672,102.653,113.226)
O2': (50.930,102.834,113.845)
N1: (48.778,103.229,110.905)
N3: (47.459,105.138,110.393)
N4: (45.829,105.002,108.795)
C6: (48.098,102.501,109.965)
C5: (47.118,103.048,109.238)
O3': (49.322,100.836,114.846)
OP1: (42.916,106.016,108.771)
OP2: (44.551,107.809,109.568)
C3': (43.537,108.882,104.694)
C1': (43.073,111.147,105.155)
C5': (42.094,108.024,106.608)
O6: (47.242,114.444,107.931)
O4': (42.190,110.348,105.926)
C8: (44.645,111.127,107.148)
C2: (45.164,114.953,105.109)
C6: (46.380,114.195,107.087)
C5: (45.585,113.026,106.952)
C4: (44.685,112.950,105.913)
P: (43.274,107.445,108.917)
C4': (42.225,108.980,105.444)
C2': (43.665,110.261,104.062)
O2': (42.895,110.440,102.901)
N1: (46.091,115.126,106.100)
N2: (45.027,115.964,104.269)
N3: (44.426,113.868,104.959)
N7: (45.546,111.874,107.723)
N9: (44.087,111.715,106.039)
O5': (43.231,108.154,107.488)
O3': (43.504,107.827,103.748)
Image (generated by PyMOL):
PyMOL image
show in jmol