ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A1086:A2016

Extra

PDB:
ATOM 1 O3' C A1085 45.698 99.465 111.959 1.00 37.49 O
ATOM 2 P C A1086 47.183 99.502 111.368 1.00 37.42 P
ATOM 3 OP1 C A1086 47.203 100.371 110.152 1.00 38.89 O
ATOM 4 OP2 C A1086 47.632 98.090 111.272 1.00 36.98 O
ATOM 5 O5' C A1086 48.002 100.249 112.506 1.00 34.94 O
ATOM 6 C5' C A1086 49.396 99.987 112.693 1.00 36.15 C
ATOM 7 C4' C A1086 50.122 101.263 113.046 1.00 35.30 C
ATOM 8 O4' C A1086 50.228 102.126 111.885 1.00 34.43 O
ATOM 9 C3' C A1086 49.395 102.103 114.075 1.00 34.30 C
ATOM 10 O3' C A1086 49.692 101.657 115.377 1.00 33.78 O
ATOM 11 C2' C A1086 49.937 103.498 113.819 1.00 34.65 C
ATOM 12 O2' C A1086 51.176 103.717 114.455 1.00 34.98 O
ATOM 13 C1' C A1086 50.124 103.481 112.299 1.00 34.41 C
ATOM 14 N1 C A1086 49.088 104.158 111.487 1.00 34.54 N
ATOM 15 C2 C A1086 48.911 105.546 111.624 1.00 34.21 C
ATOM 16 O2 C A1086 49.518 106.155 112.523 1.00 34.45 O
ATOM 17 N3 C A1086 48.079 106.188 110.779 1.00 33.91 N
ATOM 18 C4 C A1086 47.421 105.505 109.839 1.00 34.35 C
ATOM 19 N4 C A1086 46.672 106.200 108.975 1.00 33.91 N
ATOM 20 C5 C A1086 47.517 104.086 109.730 1.00 33.72 C
ATOM 21 C6 C A1086 48.347 103.458 110.571 1.00 34.77 C
ATOM 22 P U A1087 48.503 101.391 116.398 1.00 33.97 P
ATOM 23 OP1 U A1087 49.077 101.406 117.754 1.00 34.81 O
ATOM 24 OP2 U A1087 47.786 100.191 115.909 1.00 34.00 O
ATOM 25 O5' U A1087 47.581 102.678 116.250 1.00 34.25 O
TER

ATOM 1 O3' U B2015 42.615 109.048 110.297 1.00 23.72 O
ATOM 2 P G B2016 43.804 108.375 109.453 1.00 24.27 P
ATOM 3 OP1 G B2016 43.439 106.963 109.188 1.00 23.38 O
ATOM 4 OP2 G B2016 45.075 108.663 110.154 1.00 24.95 O
ATOM 5 O5' G B2016 43.766 109.153 108.062 1.00 21.56 O
ATOM 6 C5' G B2016 42.720 108.894 107.111 1.00 17.52 C
ATOM 7 C4' G B2016 42.806 109.840 105.928 1.00 16.61 C
ATOM 8 O4' G B2016 42.641 111.218 106.344 1.00 14.92 O
ATOM 9 C3' G B2016 44.091 109.821 105.137 1.00 16.09 C
ATOM 10 O3' G B2016 44.043 108.756 104.203 1.00 18.64 O
ATOM 11 C2' G B2016 44.094 111.190 104.476 1.00 15.08 C
ATOM 12 O2' G B2016 43.253 111.255 103.364 1.00 13.18 O
ATOM 13 C1' G B2016 43.486 112.060 105.574 1.00 17.47 C
ATOM 14 N9 G B2016 44.463 112.643 106.491 1.00 19.83 N
ATOM 15 C8 G B2016 44.915 112.071 107.651 1.00 21.03 C
ATOM 16 N7 G B2016 45.743 112.834 108.307 1.00 22.70 N
ATOM 17 C5 G B2016 45.857 113.974 107.528 1.00 22.22 C
ATOM 18 C6 G B2016 46.604 115.145 107.744 1.00 24.38 C
ATOM 19 O6 G B2016 47.342 115.420 108.701 1.00 28.41 O
ATOM 20 N1 G B2016 46.429 116.057 106.715 1.00 24.14 N
ATOM 21 C2 G B2016 45.637 115.860 105.621 1.00 22.02 C
ATOM 22 N2 G B2016 45.586 116.864 104.740 1.00 21.40 N
ATOM 23 N3 G B2016 44.940 114.765 105.405 1.00 20.12 N
ATOM 24 C4 G B2016 45.088 113.872 106.396 1.00 19.88 C
ATOM 25 P C B2017 45.304 107.768 104.045 1.00 22.03 P
ATOM 26 OP1 C B2017 44.901 106.740 103.066 1.00 22.50 O
ATOM 27 OP2 C B2017 45.828 107.351 105.365 1.00 21.48 O
ATOM 28 O5' C B2017 46.398 108.671 103.342 1.00 20.33 O
TER

Atoms:
C2: (48.911,105.546,111.624)
OP1: (47.203,100.371,110.152)
OP2: (47.632,98.090,111.272)
C4: (47.421,105.505,109.839)
O5': (48.002,100.249,112.506)
C3': (49.395,102.103,114.075)
C1': (50.124,103.481,112.299)
O4': (50.228,102.126,111.885)
C5': (49.396,99.987,112.693)
P: (47.183,99.502,111.368)
O2: (49.518,106.155,112.523)
C4': (50.122,101.263,113.046)
C2': (49.937,103.498,113.819)
O2': (51.176,103.717,114.455)
N1: (49.088,104.158,111.487)
N3: (48.079,106.188,110.779)
N4: (46.672,106.200,108.975)
C6: (48.347,103.458,110.571)
C5: (47.517,104.086,109.730)
O3': (49.692,101.657,115.377)
OP1: (43.439,106.963,109.188)
OP2: (45.075,108.663,110.154)
C3': (44.091,109.821,105.137)
C1': (43.486,112.060,105.574)
C5': (42.720,108.894,107.111)
O6: (47.342,115.420,108.701)
O4': (42.641,111.218,106.344)
C8: (44.915,112.071,107.651)
C2: (45.637,115.860,105.621)
C6: (46.604,115.145,107.744)
C5: (45.857,113.974,107.528)
C4: (45.088,113.872,106.396)
P: (43.804,108.375,109.453)
C4': (42.806,109.840,105.928)
C2': (44.094,111.190,104.476)
O2': (43.253,111.255,103.364)
N1: (46.429,116.057,106.715)
N2: (45.586,116.864,104.740)
N3: (44.940,114.765,105.405)
N7: (45.743,112.834,108.307)
N9: (44.463,112.643,106.491)
O5': (43.766,109.153,108.062)
O3': (44.043,108.756,104.203)
Image (generated by PyMOL):
PyMOL image
show in jmol