Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1086:A2016
Extra
PDB:
ATOM 1 O3' C A1085 45.443 99.011 111.481 1.00 39.81 O
ATOM 2 P C A1086 46.901 99.033 110.792 1.00 38.65 P
ATOM 3 OP1 C A1086 46.795 99.826 109.542 1.00 39.15 O
ATOM 4 OP2 C A1086 47.415 97.644 110.741 1.00 37.81 O
ATOM 5 O5' C A1086 47.774 99.898 111.797 1.00 36.41 O
ATOM 6 C5' C A1086 49.118 99.527 112.134 1.00 35.93 C
ATOM 7 C4' C A1086 49.897 100.749 112.536 1.00 35.49 C
ATOM 8 O4' C A1086 50.104 101.590 111.376 1.00 33.64 O
ATOM 9 C3' C A1086 49.176 101.633 113.542 1.00 34.74 C
ATOM 10 O3' C A1086 49.481 101.219 114.871 1.00 35.87 O
ATOM 11 C2' C A1086 49.774 103.007 113.276 1.00 33.72 C
ATOM 12 O2' C A1086 50.983 103.215 113.972 1.00 33.18 O
ATOM 13 C1' C A1086 50.047 102.951 111.767 1.00 33.68 C
ATOM 14 N1 C A1086 49.043 103.635 110.939 1.00 33.95 N
ATOM 15 C2 C A1086 48.907 105.026 111.044 1.00 33.93 C
ATOM 16 O2 C A1086 49.657 105.654 111.815 1.00 33.03 O
ATOM 17 N3 C A1086 47.974 105.650 110.300 1.00 33.85 N
ATOM 18 C4 C A1086 47.211 104.949 109.464 1.00 33.83 C
ATOM 19 N4 C A1086 46.307 105.606 108.743 1.00 35.02 N
ATOM 20 C5 C A1086 47.337 103.542 109.328 1.00 32.67 C
ATOM 21 C6 C A1086 48.252 102.930 110.078 1.00 34.00 C
ATOM 22 P U A1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 23 OP1 U A1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 24 OP2 U A1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 25 O5' U A1087 47.357 102.187 115.833 1.00 33.84 O
TER
ATOM 1 O3' U B2015 42.284 108.568 109.671 1.00 24.93 O
ATOM 2 P G B2016 43.484 107.882 108.871 1.00 25.40 P
ATOM 3 OP1 G B2016 43.106 106.491 108.575 1.00 26.03 O
ATOM 4 OP2 G B2016 44.745 108.153 109.609 1.00 25.88 O
ATOM 5 O5' G B2016 43.447 108.644 107.483 1.00 22.01 O
ATOM 6 C5' G B2016 42.370 108.404 106.568 1.00 21.83 C
ATOM 7 C4' G B2016 42.462 109.367 105.435 1.00 21.46 C
ATOM 8 O4' G B2016 42.405 110.719 105.965 1.00 21.54 O
ATOM 9 C3' G B2016 43.798 109.295 104.722 1.00 21.91 C
ATOM 10 O3' G B2016 43.769 108.209 103.794 1.00 24.07 O
ATOM 11 C2' G B2016 43.889 110.684 104.103 1.00 20.78 C
ATOM 12 O2' G B2016 43.060 110.809 102.967 1.00 19.25 O
ATOM 13 C1' G B2016 43.289 111.538 105.225 1.00 22.97 C
ATOM 14 N9 G B2016 44.311 112.092 106.114 1.00 24.70 N
ATOM 15 C8 G B2016 44.908 111.520 107.215 1.00 25.78 C
ATOM 16 N7 G B2016 45.813 112.287 107.763 1.00 26.14 N
ATOM 17 C5 G B2016 45.803 113.432 106.978 1.00 25.56 C
ATOM 18 C6 G B2016 46.561 114.615 107.067 1.00 26.85 C
ATOM 19 O6 G B2016 47.452 114.896 107.879 1.00 28.60 O
ATOM 20 N1 G B2016 46.207 115.527 106.066 1.00 25.56 N
ATOM 21 C2 G B2016 45.261 115.309 105.097 1.00 23.14 C
ATOM 22 N2 G B2016 45.055 116.297 104.212 1.00 24.05 N
ATOM 23 N3 G B2016 44.565 114.207 105.000 1.00 23.85 N
ATOM 24 C4 G B2016 44.878 113.322 105.965 1.00 24.42 C
ATOM 25 P C B2017 45.059 107.252 103.617 1.00 28.03 P
ATOM 26 OP1 C B2017 44.686 106.286 102.573 1.00 27.85 O
ATOM 27 OP2 C B2017 45.581 106.743 104.923 1.00 27.73 O
ATOM 28 O5' C B2017 46.173 108.221 103.028 1.00 26.41 O
TER
ATOM 2 P C A1086 46.901 99.033 110.792 1.00 38.65 P
ATOM 3 OP1 C A1086 46.795 99.826 109.542 1.00 39.15 O
ATOM 4 OP2 C A1086 47.415 97.644 110.741 1.00 37.81 O
ATOM 5 O5' C A1086 47.774 99.898 111.797 1.00 36.41 O
ATOM 6 C5' C A1086 49.118 99.527 112.134 1.00 35.93 C
ATOM 7 C4' C A1086 49.897 100.749 112.536 1.00 35.49 C
ATOM 8 O4' C A1086 50.104 101.590 111.376 1.00 33.64 O
ATOM 9 C3' C A1086 49.176 101.633 113.542 1.00 34.74 C
ATOM 10 O3' C A1086 49.481 101.219 114.871 1.00 35.87 O
ATOM 11 C2' C A1086 49.774 103.007 113.276 1.00 33.72 C
ATOM 12 O2' C A1086 50.983 103.215 113.972 1.00 33.18 O
ATOM 13 C1' C A1086 50.047 102.951 111.767 1.00 33.68 C
ATOM 14 N1 C A1086 49.043 103.635 110.939 1.00 33.95 N
ATOM 15 C2 C A1086 48.907 105.026 111.044 1.00 33.93 C
ATOM 16 O2 C A1086 49.657 105.654 111.815 1.00 33.03 O
ATOM 17 N3 C A1086 47.974 105.650 110.300 1.00 33.85 N
ATOM 18 C4 C A1086 47.211 104.949 109.464 1.00 33.83 C
ATOM 19 N4 C A1086 46.307 105.606 108.743 1.00 35.02 N
ATOM 20 C5 C A1086 47.337 103.542 109.328 1.00 32.67 C
ATOM 21 C6 C A1086 48.252 102.930 110.078 1.00 34.00 C
ATOM 22 P U A1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 23 OP1 U A1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 24 OP2 U A1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 25 O5' U A1087 47.357 102.187 115.833 1.00 33.84 O
TER
ATOM 1 O3' U B2015 42.284 108.568 109.671 1.00 24.93 O
ATOM 2 P G B2016 43.484 107.882 108.871 1.00 25.40 P
ATOM 3 OP1 G B2016 43.106 106.491 108.575 1.00 26.03 O
ATOM 4 OP2 G B2016 44.745 108.153 109.609 1.00 25.88 O
ATOM 5 O5' G B2016 43.447 108.644 107.483 1.00 22.01 O
ATOM 6 C5' G B2016 42.370 108.404 106.568 1.00 21.83 C
ATOM 7 C4' G B2016 42.462 109.367 105.435 1.00 21.46 C
ATOM 8 O4' G B2016 42.405 110.719 105.965 1.00 21.54 O
ATOM 9 C3' G B2016 43.798 109.295 104.722 1.00 21.91 C
ATOM 10 O3' G B2016 43.769 108.209 103.794 1.00 24.07 O
ATOM 11 C2' G B2016 43.889 110.684 104.103 1.00 20.78 C
ATOM 12 O2' G B2016 43.060 110.809 102.967 1.00 19.25 O
ATOM 13 C1' G B2016 43.289 111.538 105.225 1.00 22.97 C
ATOM 14 N9 G B2016 44.311 112.092 106.114 1.00 24.70 N
ATOM 15 C8 G B2016 44.908 111.520 107.215 1.00 25.78 C
ATOM 16 N7 G B2016 45.813 112.287 107.763 1.00 26.14 N
ATOM 17 C5 G B2016 45.803 113.432 106.978 1.00 25.56 C
ATOM 18 C6 G B2016 46.561 114.615 107.067 1.00 26.85 C
ATOM 19 O6 G B2016 47.452 114.896 107.879 1.00 28.60 O
ATOM 20 N1 G B2016 46.207 115.527 106.066 1.00 25.56 N
ATOM 21 C2 G B2016 45.261 115.309 105.097 1.00 23.14 C
ATOM 22 N2 G B2016 45.055 116.297 104.212 1.00 24.05 N
ATOM 23 N3 G B2016 44.565 114.207 105.000 1.00 23.85 N
ATOM 24 C4 G B2016 44.878 113.322 105.965 1.00 24.42 C
ATOM 25 P C B2017 45.059 107.252 103.617 1.00 28.03 P
ATOM 26 OP1 C B2017 44.686 106.286 102.573 1.00 27.85 O
ATOM 27 OP2 C B2017 45.581 106.743 104.923 1.00 27.73 O
ATOM 28 O5' C B2017 46.173 108.221 103.028 1.00 26.41 O
TER
Atoms:
C2: (48.907,105.026,111.044)
OP1: (46.795,99.826,109.542)
OP2: (47.415,97.644,110.741)
C4: (47.211,104.949,109.464)
O5': (47.774,99.898,111.797)
C3': (49.176,101.633,113.542)
C1': (50.047,102.951,111.767)
O4': (50.104,101.590,111.376)
C5': (49.118,99.527,112.134)
P: (46.901,99.033,110.792)
O2: (49.657,105.654,111.815)
C4': (49.897,100.749,112.536)
C2': (49.774,103.007,113.276)
O2': (50.983,103.215,113.972)
N1: (49.043,103.635,110.939)
N3: (47.974,105.650,110.300)
N4: (46.307,105.606,108.743)
C6: (48.252,102.930,110.078)
C5: (47.337,103.542,109.328)
O3': (49.481,101.219,114.871)
OP1: (46.795,99.826,109.542)
OP2: (47.415,97.644,110.741)
C4: (47.211,104.949,109.464)
O5': (47.774,99.898,111.797)
C3': (49.176,101.633,113.542)
C1': (50.047,102.951,111.767)
O4': (50.104,101.590,111.376)
C5': (49.118,99.527,112.134)
P: (46.901,99.033,110.792)
O2: (49.657,105.654,111.815)
C4': (49.897,100.749,112.536)
C2': (49.774,103.007,113.276)
O2': (50.983,103.215,113.972)
N1: (49.043,103.635,110.939)
N3: (47.974,105.650,110.300)
N4: (46.307,105.606,108.743)
C6: (48.252,102.930,110.078)
C5: (47.337,103.542,109.328)
O3': (49.481,101.219,114.871)
OP1: (43.106,106.491,108.575)
OP2: (44.745,108.153,109.609)
C3': (43.798,109.295,104.722)
C1': (43.289,111.538,105.225)
C5': (42.370,108.404,106.568)
O6: (47.452,114.896,107.879)
O4': (42.405,110.719,105.965)
C8: (44.908,111.520,107.215)
C2: (45.261,115.309,105.097)
C6: (46.561,114.615,107.067)
C5: (45.803,113.432,106.978)
C4: (44.878,113.322,105.965)
P: (43.484,107.882,108.871)
C4': (42.462,109.367,105.435)
C2': (43.889,110.684,104.103)
O2': (43.060,110.809,102.967)
N1: (46.207,115.527,106.066)
N2: (45.055,116.297,104.212)
N3: (44.565,114.207,105.000)
N7: (45.813,112.287,107.763)
N9: (44.311,112.092,106.114)
O5': (43.447,108.644,107.483)
O3': (43.769,108.209,103.794)
OP2: (44.745,108.153,109.609)
C3': (43.798,109.295,104.722)
C1': (43.289,111.538,105.225)
C5': (42.370,108.404,106.568)
O6: (47.452,114.896,107.879)
O4': (42.405,110.719,105.965)
C8: (44.908,111.520,107.215)
C2: (45.261,115.309,105.097)
C6: (46.561,114.615,107.067)
C5: (45.803,113.432,106.978)
C4: (44.878,113.322,105.965)
P: (43.484,107.882,108.871)
C4': (42.462,109.367,105.435)
C2': (43.889,110.684,104.103)
O2': (43.060,110.809,102.967)
N1: (46.207,115.527,106.066)
N2: (45.055,116.297,104.212)
N3: (44.565,114.207,105.000)
N7: (45.813,112.287,107.763)
N9: (44.311,112.092,106.114)
O5': (43.447,108.644,107.483)
O3': (43.769,108.209,103.794)
Image (generated by PyMOL):