Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:041:0111
Extra
PDB:
ATOM 1 O3' G A 40 62.537 144.317 40.995 1.00 37.47 O
ATOM 2 P G A 41 61.779 145.691 41.333 1.00 39.71 P
ATOM 3 OP1 G A 41 60.900 145.461 42.514 1.00 40.10 O
ATOM 4 OP2 G A 41 61.188 146.206 40.071 1.00 39.80 O
ATOM 5 O5' G A 41 62.952 146.690 41.754 1.00 38.79 O
ATOM 6 C5' G A 41 63.723 146.473 42.952 1.00 35.74 C
ATOM 7 C4' G A 41 64.891 147.434 43.015 1.00 35.35 C
ATOM 8 O4' G A 41 65.675 147.299 41.800 1.00 35.61 O
ATOM 9 C3' G A 41 64.585 148.925 43.067 1.00 33.77 C
ATOM 10 O3' G A 41 64.251 149.371 44.375 1.00 31.83 O
ATOM 11 C2' G A 41 65.903 149.518 42.597 1.00 34.20 C
ATOM 12 O2' G A 41 66.907 149.491 43.583 1.00 35.67 O
ATOM 13 C1' G A 41 66.285 148.541 41.489 1.00 35.75 C
ATOM 14 N9 G A 41 65.768 149.024 40.213 1.00 38.30 N
ATOM 15 C8 G A 41 64.737 148.515 39.462 1.00 37.83 C
ATOM 16 N7 G A 41 64.478 149.231 38.402 1.00 37.41 N
ATOM 17 C5 G A 41 65.400 150.266 38.454 1.00 37.51 C
ATOM 18 C6 G A 41 65.591 151.375 37.594 1.00 38.74 C
ATOM 19 O6 G A 41 64.955 151.686 36.581 1.00 39.15 O
ATOM 20 N1 G A 41 66.641 152.177 38.023 1.00 38.64 N
ATOM 21 C2 G A 41 67.398 151.951 39.141 1.00 37.14 C
ATOM 22 N2 G A 41 68.352 152.837 39.403 1.00 37.80 N
ATOM 23 N3 G A 41 67.227 150.931 39.948 1.00 38.63 N
ATOM 24 C4 G A 41 66.216 150.137 39.550 1.00 37.92 C
ATOM 25 P A A 42 63.475 150.774 44.579 1.00 35.22 P
ATOM 26 OP1 A A 42 63.245 150.909 46.045 1.00 35.12 O
ATOM 27 OP2 A A 42 62.321 150.882 43.641 1.00 34.90 O
ATOM 28 O5' A A 42 64.528 151.889 44.148 1.00 34.01 O
TER
ATOM 1 O3' A B 110 75.843 154.993 45.809 1.00 33.42 O
ATOM 2 P U B 111 75.395 156.539 45.837 1.00 33.84 P
ATOM 3 OP1 U B 111 76.609 157.342 45.540 1.00 37.00 O
ATOM 4 OP2 U B 111 74.647 156.795 47.082 1.00 31.83 O
ATOM 5 O5' U B 111 74.412 156.680 44.589 1.00 32.81 O
ATOM 6 C5' U B 111 74.935 156.696 43.239 1.00 36.47 C
ATOM 7 C4' U B 111 73.858 156.330 42.244 1.00 36.31 C
ATOM 8 O4' U B 111 73.456 154.963 42.462 1.00 37.03 O
ATOM 9 C3' U B 111 72.572 157.139 42.334 1.00 38.27 C
ATOM 10 O3' U B 111 72.709 158.323 41.543 1.00 38.82 O
ATOM 11 C2' U B 111 71.524 156.193 41.752 1.00 38.57 C
ATOM 12 O2' U B 111 71.385 156.273 40.352 1.00 41.06 O
ATOM 13 C1' U B 111 72.096 154.817 42.111 1.00 39.33 C
ATOM 14 N1 U B 111 71.391 154.098 43.182 1.00 40.89 N
ATOM 15 C2 U B 111 70.377 153.235 42.802 1.00 41.68 C
ATOM 16 O2 U B 111 70.073 153.039 41.638 1.00 43.95 O
ATOM 17 N3 U B 111 69.732 152.609 43.835 1.00 40.64 N
ATOM 18 C4 U B 111 69.988 152.749 45.178 1.00 39.58 C
ATOM 19 O4 U B 111 69.251 152.192 45.985 1.00 39.98 O
ATOM 20 C5 U B 111 71.062 153.642 45.495 1.00 40.18 C
ATOM 21 C6 U B 111 71.711 154.273 44.511 1.00 40.72 C
ATOM 22 P C B 112 71.805 159.619 41.845 1.00 40.72 P
ATOM 23 OP1 C B 112 70.832 159.319 42.929 1.00 41.29 O
ATOM 24 OP2 C B 112 71.306 160.124 40.538 1.00 38.77 O
ATOM 25 O5' C B 112 72.867 160.663 42.409 1.00 41.31 O
TER
ATOM 2 P G A 41 61.779 145.691 41.333 1.00 39.71 P
ATOM 3 OP1 G A 41 60.900 145.461 42.514 1.00 40.10 O
ATOM 4 OP2 G A 41 61.188 146.206 40.071 1.00 39.80 O
ATOM 5 O5' G A 41 62.952 146.690 41.754 1.00 38.79 O
ATOM 6 C5' G A 41 63.723 146.473 42.952 1.00 35.74 C
ATOM 7 C4' G A 41 64.891 147.434 43.015 1.00 35.35 C
ATOM 8 O4' G A 41 65.675 147.299 41.800 1.00 35.61 O
ATOM 9 C3' G A 41 64.585 148.925 43.067 1.00 33.77 C
ATOM 10 O3' G A 41 64.251 149.371 44.375 1.00 31.83 O
ATOM 11 C2' G A 41 65.903 149.518 42.597 1.00 34.20 C
ATOM 12 O2' G A 41 66.907 149.491 43.583 1.00 35.67 O
ATOM 13 C1' G A 41 66.285 148.541 41.489 1.00 35.75 C
ATOM 14 N9 G A 41 65.768 149.024 40.213 1.00 38.30 N
ATOM 15 C8 G A 41 64.737 148.515 39.462 1.00 37.83 C
ATOM 16 N7 G A 41 64.478 149.231 38.402 1.00 37.41 N
ATOM 17 C5 G A 41 65.400 150.266 38.454 1.00 37.51 C
ATOM 18 C6 G A 41 65.591 151.375 37.594 1.00 38.74 C
ATOM 19 O6 G A 41 64.955 151.686 36.581 1.00 39.15 O
ATOM 20 N1 G A 41 66.641 152.177 38.023 1.00 38.64 N
ATOM 21 C2 G A 41 67.398 151.951 39.141 1.00 37.14 C
ATOM 22 N2 G A 41 68.352 152.837 39.403 1.00 37.80 N
ATOM 23 N3 G A 41 67.227 150.931 39.948 1.00 38.63 N
ATOM 24 C4 G A 41 66.216 150.137 39.550 1.00 37.92 C
ATOM 25 P A A 42 63.475 150.774 44.579 1.00 35.22 P
ATOM 26 OP1 A A 42 63.245 150.909 46.045 1.00 35.12 O
ATOM 27 OP2 A A 42 62.321 150.882 43.641 1.00 34.90 O
ATOM 28 O5' A A 42 64.528 151.889 44.148 1.00 34.01 O
TER
ATOM 1 O3' A B 110 75.843 154.993 45.809 1.00 33.42 O
ATOM 2 P U B 111 75.395 156.539 45.837 1.00 33.84 P
ATOM 3 OP1 U B 111 76.609 157.342 45.540 1.00 37.00 O
ATOM 4 OP2 U B 111 74.647 156.795 47.082 1.00 31.83 O
ATOM 5 O5' U B 111 74.412 156.680 44.589 1.00 32.81 O
ATOM 6 C5' U B 111 74.935 156.696 43.239 1.00 36.47 C
ATOM 7 C4' U B 111 73.858 156.330 42.244 1.00 36.31 C
ATOM 8 O4' U B 111 73.456 154.963 42.462 1.00 37.03 O
ATOM 9 C3' U B 111 72.572 157.139 42.334 1.00 38.27 C
ATOM 10 O3' U B 111 72.709 158.323 41.543 1.00 38.82 O
ATOM 11 C2' U B 111 71.524 156.193 41.752 1.00 38.57 C
ATOM 12 O2' U B 111 71.385 156.273 40.352 1.00 41.06 O
ATOM 13 C1' U B 111 72.096 154.817 42.111 1.00 39.33 C
ATOM 14 N1 U B 111 71.391 154.098 43.182 1.00 40.89 N
ATOM 15 C2 U B 111 70.377 153.235 42.802 1.00 41.68 C
ATOM 16 O2 U B 111 70.073 153.039 41.638 1.00 43.95 O
ATOM 17 N3 U B 111 69.732 152.609 43.835 1.00 40.64 N
ATOM 18 C4 U B 111 69.988 152.749 45.178 1.00 39.58 C
ATOM 19 O4 U B 111 69.251 152.192 45.985 1.00 39.98 O
ATOM 20 C5 U B 111 71.062 153.642 45.495 1.00 40.18 C
ATOM 21 C6 U B 111 71.711 154.273 44.511 1.00 40.72 C
ATOM 22 P C B 112 71.805 159.619 41.845 1.00 40.72 P
ATOM 23 OP1 C B 112 70.832 159.319 42.929 1.00 41.29 O
ATOM 24 OP2 C B 112 71.306 160.124 40.538 1.00 38.77 O
ATOM 25 O5' C B 112 72.867 160.663 42.409 1.00 41.31 O
TER
Atoms:
OP1: (60.900,145.461,42.514)
OP2: (61.188,146.206,40.071)
C3': (64.585,148.925,43.067)
C1': (66.285,148.541,41.489)
C5': (63.723,146.473,42.952)
O6: (64.955,151.686,36.581)
O4': (65.675,147.299,41.800)
C8: (64.737,148.515,39.462)
C2: (67.398,151.951,39.141)
C6: (65.591,151.375,37.594)
C5: (65.400,150.266,38.454)
C4: (66.216,150.137,39.550)
P: (61.779,145.691,41.333)
C4': (64.891,147.434,43.015)
C2': (65.903,149.518,42.597)
O2': (66.907,149.491,43.583)
N1: (66.641,152.177,38.023)
N2: (68.352,152.837,39.403)
N3: (67.227,150.931,39.948)
N7: (64.478,149.231,38.402)
N9: (65.768,149.024,40.213)
O5': (62.952,146.690,41.754)
O3': (64.251,149.371,44.375)
OP2: (61.188,146.206,40.071)
C3': (64.585,148.925,43.067)
C1': (66.285,148.541,41.489)
C5': (63.723,146.473,42.952)
O6: (64.955,151.686,36.581)
O4': (65.675,147.299,41.800)
C8: (64.737,148.515,39.462)
C2: (67.398,151.951,39.141)
C6: (65.591,151.375,37.594)
C5: (65.400,150.266,38.454)
C4: (66.216,150.137,39.550)
P: (61.779,145.691,41.333)
C4': (64.891,147.434,43.015)
C2': (65.903,149.518,42.597)
O2': (66.907,149.491,43.583)
N1: (66.641,152.177,38.023)
N2: (68.352,152.837,39.403)
N3: (67.227,150.931,39.948)
N7: (64.478,149.231,38.402)
N9: (65.768,149.024,40.213)
O5': (62.952,146.690,41.754)
O3': (64.251,149.371,44.375)
C4: (69.988,152.749,45.178)
N3: (69.732,152.609,43.835)
OP1: (76.609,157.342,45.540)
OP2: (74.647,156.795,47.082)
C2: (70.377,153.235,42.802)
C1': (72.096,154.817,42.111)
C3': (72.572,157.139,42.334)
O5': (74.412,156.680,44.589)
O4': (73.456,154.963,42.462)
C5': (74.935,156.696,43.239)
P: (75.395,156.539,45.837)
C4': (73.858,156.330,42.244)
C2': (71.524,156.193,41.752)
O2': (71.385,156.273,40.352)
N1: (71.391,154.098,43.182)
O4: (69.251,152.192,45.985)
O2: (70.073,153.039,41.638)
C6: (71.711,154.273,44.511)
C5: (71.062,153.642,45.495)
O3': (72.709,158.323,41.543)
N3: (69.732,152.609,43.835)
OP1: (76.609,157.342,45.540)
OP2: (74.647,156.795,47.082)
C2: (70.377,153.235,42.802)
C1': (72.096,154.817,42.111)
C3': (72.572,157.139,42.334)
O5': (74.412,156.680,44.589)
O4': (73.456,154.963,42.462)
C5': (74.935,156.696,43.239)
P: (75.395,156.539,45.837)
C4': (73.858,156.330,42.244)
C2': (71.524,156.193,41.752)
O2': (71.385,156.273,40.352)
N1: (71.391,154.098,43.182)
O4: (69.251,152.192,45.985)
O2: (70.073,153.039,41.638)
C6: (71.711,154.273,44.511)
C5: (71.062,153.642,45.495)
O3': (72.709,158.323,41.543)
Image (generated by PyMOL):