Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:041:0111
Extra
PDB:
ATOM 1 O3' G A 40 62.994 144.518 41.303 1.00 51.92 O
ATOM 2 P G A 41 62.173 145.874 41.557 1.00 54.06 P
ATOM 3 OP1 G A 41 61.221 145.612 42.673 1.00 53.25 O
ATOM 4 OP2 G A 41 61.648 146.328 40.247 1.00 55.21 O
ATOM 5 O5' G A 41 63.284 146.927 42.014 1.00 52.31 O
ATOM 6 C5' G A 41 64.050 146.727 43.222 1.00 51.52 C
ATOM 7 C4' G A 41 65.238 147.674 43.280 1.00 50.33 C
ATOM 8 O4' G A 41 66.057 147.511 42.089 1.00 51.04 O
ATOM 9 C3' G A 41 64.964 149.167 43.319 1.00 48.71 C
ATOM 10 O3' G A 41 64.627 149.608 44.625 1.00 47.78 O
ATOM 11 C2' G A 41 66.304 149.728 42.871 1.00 49.56 C
ATOM 12 O2' G A 41 67.277 149.666 43.887 1.00 51.79 O
ATOM 13 C1' G A 41 66.690 148.738 41.772 1.00 49.65 C
ATOM 14 N9 G A 41 66.197 149.198 40.480 1.00 50.00 N
ATOM 15 C8 G A 41 65.200 148.647 39.712 1.00 50.75 C
ATOM 16 N7 G A 41 64.928 149.350 38.647 1.00 51.59 N
ATOM 17 C5 G A 41 65.813 150.415 38.708 1.00 52.81 C
ATOM 18 C6 G A 41 65.982 151.522 37.838 1.00 54.14 C
ATOM 19 O6 G A 41 65.352 151.799 36.811 1.00 55.11 O
ATOM 20 N1 G A 41 67.004 152.362 38.274 1.00 54.47 N
ATOM 21 C2 G A 41 67.759 152.164 39.407 1.00 54.32 C
ATOM 22 N2 G A 41 68.704 153.075 39.665 1.00 54.82 N
ATOM 23 N3 G A 41 67.599 151.145 40.228 1.00 53.52 N
ATOM 24 C4 G A 41 66.618 150.318 39.821 1.00 51.78 C
ATOM 25 P A A 42 63.798 150.976 44.826 1.00 50.65 P
ATOM 26 OP1 A A 42 63.493 151.082 46.280 1.00 49.67 O
ATOM 27 OP2 A A 42 62.683 151.047 43.842 1.00 50.56 O
ATOM 28 O5' A A 42 64.835 152.124 44.451 1.00 49.08 O
TER
ATOM 1 O3' A B 110 76.243 155.153 46.124 1.00 49.20 O
ATOM 2 P U B 111 75.838 156.711 46.142 1.00 49.40 P
ATOM 3 OP1 U B 111 77.051 157.527 45.860 1.00 50.88 O
ATOM 4 OP2 U B 111 75.066 156.966 47.375 1.00 49.81 O
ATOM 5 O5' U B 111 74.866 156.847 44.889 1.00 49.37 O
ATOM 6 C5' U B 111 75.376 156.743 43.539 1.00 50.92 C
ATOM 7 C4' U B 111 74.266 156.370 42.580 1.00 52.06 C
ATOM 8 O4' U B 111 73.790 155.052 42.918 1.00 53.10 O
ATOM 9 C3' U B 111 73.007 157.224 42.643 1.00 53.65 C
ATOM 10 O3' U B 111 73.168 158.419 41.862 1.00 54.65 O
ATOM 11 C2' U B 111 71.937 156.292 42.067 1.00 54.06 C
ATOM 12 O2' U B 111 71.839 156.297 40.659 1.00 56.14 O
ATOM 13 C1' U B 111 72.452 154.914 42.487 1.00 54.44 C
ATOM 14 N1 U B 111 71.681 154.225 43.530 1.00 56.30 N
ATOM 15 C2 U B 111 70.578 153.488 43.131 1.00 56.76 C
ATOM 16 O2 U B 111 70.224 153.390 41.966 1.00 56.28 O
ATOM 17 N3 U B 111 69.905 152.866 44.151 1.00 58.03 N
ATOM 18 C4 U B 111 70.211 152.900 45.496 1.00 57.36 C
ATOM 19 O4 U B 111 69.476 152.324 46.298 1.00 56.46 O
ATOM 20 C5 U B 111 71.364 153.677 45.826 1.00 56.88 C
ATOM 21 C6 U B 111 72.040 154.299 44.858 1.00 56.80 C
ATOM 22 P C B 112 72.231 159.703 42.136 1.00 55.84 P
ATOM 23 OP1 C B 112 71.305 159.413 43.268 1.00 56.48 O
ATOM 24 OP2 C B 112 71.674 160.159 40.834 1.00 54.05 O
ATOM 25 O5' C B 112 73.260 160.805 42.629 1.00 54.98 O
TER
ATOM 2 P G A 41 62.173 145.874 41.557 1.00 54.06 P
ATOM 3 OP1 G A 41 61.221 145.612 42.673 1.00 53.25 O
ATOM 4 OP2 G A 41 61.648 146.328 40.247 1.00 55.21 O
ATOM 5 O5' G A 41 63.284 146.927 42.014 1.00 52.31 O
ATOM 6 C5' G A 41 64.050 146.727 43.222 1.00 51.52 C
ATOM 7 C4' G A 41 65.238 147.674 43.280 1.00 50.33 C
ATOM 8 O4' G A 41 66.057 147.511 42.089 1.00 51.04 O
ATOM 9 C3' G A 41 64.964 149.167 43.319 1.00 48.71 C
ATOM 10 O3' G A 41 64.627 149.608 44.625 1.00 47.78 O
ATOM 11 C2' G A 41 66.304 149.728 42.871 1.00 49.56 C
ATOM 12 O2' G A 41 67.277 149.666 43.887 1.00 51.79 O
ATOM 13 C1' G A 41 66.690 148.738 41.772 1.00 49.65 C
ATOM 14 N9 G A 41 66.197 149.198 40.480 1.00 50.00 N
ATOM 15 C8 G A 41 65.200 148.647 39.712 1.00 50.75 C
ATOM 16 N7 G A 41 64.928 149.350 38.647 1.00 51.59 N
ATOM 17 C5 G A 41 65.813 150.415 38.708 1.00 52.81 C
ATOM 18 C6 G A 41 65.982 151.522 37.838 1.00 54.14 C
ATOM 19 O6 G A 41 65.352 151.799 36.811 1.00 55.11 O
ATOM 20 N1 G A 41 67.004 152.362 38.274 1.00 54.47 N
ATOM 21 C2 G A 41 67.759 152.164 39.407 1.00 54.32 C
ATOM 22 N2 G A 41 68.704 153.075 39.665 1.00 54.82 N
ATOM 23 N3 G A 41 67.599 151.145 40.228 1.00 53.52 N
ATOM 24 C4 G A 41 66.618 150.318 39.821 1.00 51.78 C
ATOM 25 P A A 42 63.798 150.976 44.826 1.00 50.65 P
ATOM 26 OP1 A A 42 63.493 151.082 46.280 1.00 49.67 O
ATOM 27 OP2 A A 42 62.683 151.047 43.842 1.00 50.56 O
ATOM 28 O5' A A 42 64.835 152.124 44.451 1.00 49.08 O
TER
ATOM 1 O3' A B 110 76.243 155.153 46.124 1.00 49.20 O
ATOM 2 P U B 111 75.838 156.711 46.142 1.00 49.40 P
ATOM 3 OP1 U B 111 77.051 157.527 45.860 1.00 50.88 O
ATOM 4 OP2 U B 111 75.066 156.966 47.375 1.00 49.81 O
ATOM 5 O5' U B 111 74.866 156.847 44.889 1.00 49.37 O
ATOM 6 C5' U B 111 75.376 156.743 43.539 1.00 50.92 C
ATOM 7 C4' U B 111 74.266 156.370 42.580 1.00 52.06 C
ATOM 8 O4' U B 111 73.790 155.052 42.918 1.00 53.10 O
ATOM 9 C3' U B 111 73.007 157.224 42.643 1.00 53.65 C
ATOM 10 O3' U B 111 73.168 158.419 41.862 1.00 54.65 O
ATOM 11 C2' U B 111 71.937 156.292 42.067 1.00 54.06 C
ATOM 12 O2' U B 111 71.839 156.297 40.659 1.00 56.14 O
ATOM 13 C1' U B 111 72.452 154.914 42.487 1.00 54.44 C
ATOM 14 N1 U B 111 71.681 154.225 43.530 1.00 56.30 N
ATOM 15 C2 U B 111 70.578 153.488 43.131 1.00 56.76 C
ATOM 16 O2 U B 111 70.224 153.390 41.966 1.00 56.28 O
ATOM 17 N3 U B 111 69.905 152.866 44.151 1.00 58.03 N
ATOM 18 C4 U B 111 70.211 152.900 45.496 1.00 57.36 C
ATOM 19 O4 U B 111 69.476 152.324 46.298 1.00 56.46 O
ATOM 20 C5 U B 111 71.364 153.677 45.826 1.00 56.88 C
ATOM 21 C6 U B 111 72.040 154.299 44.858 1.00 56.80 C
ATOM 22 P C B 112 72.231 159.703 42.136 1.00 55.84 P
ATOM 23 OP1 C B 112 71.305 159.413 43.268 1.00 56.48 O
ATOM 24 OP2 C B 112 71.674 160.159 40.834 1.00 54.05 O
ATOM 25 O5' C B 112 73.260 160.805 42.629 1.00 54.98 O
TER
Atoms:
OP1: (61.221,145.612,42.673)
OP2: (61.648,146.328,40.247)
C3': (64.964,149.167,43.319)
C1': (66.690,148.738,41.772)
C5': (64.050,146.727,43.222)
O6: (65.352,151.799,36.811)
O4': (66.057,147.511,42.089)
C8: (65.200,148.647,39.712)
C2: (67.759,152.164,39.407)
C6: (65.982,151.522,37.838)
C5: (65.813,150.415,38.708)
C4: (66.618,150.318,39.821)
P: (62.173,145.874,41.557)
C4': (65.238,147.674,43.280)
C2': (66.304,149.728,42.871)
O2': (67.277,149.666,43.887)
N1: (67.004,152.362,38.274)
N2: (68.704,153.075,39.665)
N3: (67.599,151.145,40.228)
N7: (64.928,149.350,38.647)
N9: (66.197,149.198,40.480)
O5': (63.284,146.927,42.014)
O3': (64.627,149.608,44.625)
OP2: (61.648,146.328,40.247)
C3': (64.964,149.167,43.319)
C1': (66.690,148.738,41.772)
C5': (64.050,146.727,43.222)
O6: (65.352,151.799,36.811)
O4': (66.057,147.511,42.089)
C8: (65.200,148.647,39.712)
C2: (67.759,152.164,39.407)
C6: (65.982,151.522,37.838)
C5: (65.813,150.415,38.708)
C4: (66.618,150.318,39.821)
P: (62.173,145.874,41.557)
C4': (65.238,147.674,43.280)
C2': (66.304,149.728,42.871)
O2': (67.277,149.666,43.887)
N1: (67.004,152.362,38.274)
N2: (68.704,153.075,39.665)
N3: (67.599,151.145,40.228)
N7: (64.928,149.350,38.647)
N9: (66.197,149.198,40.480)
O5': (63.284,146.927,42.014)
O3': (64.627,149.608,44.625)
C4: (70.211,152.900,45.496)
N3: (69.905,152.866,44.151)
OP1: (77.051,157.527,45.860)
OP2: (75.066,156.966,47.375)
C2: (70.578,153.488,43.131)
C1': (72.452,154.914,42.487)
C3': (73.007,157.224,42.643)
O5': (74.866,156.847,44.889)
O4': (73.790,155.052,42.918)
C5': (75.376,156.743,43.539)
P: (75.838,156.711,46.142)
C4': (74.266,156.370,42.580)
C2': (71.937,156.292,42.067)
O2': (71.839,156.297,40.659)
N1: (71.681,154.225,43.530)
O4: (69.476,152.324,46.298)
O2: (70.224,153.390,41.966)
C6: (72.040,154.299,44.858)
C5: (71.364,153.677,45.826)
O3': (73.168,158.419,41.862)
N3: (69.905,152.866,44.151)
OP1: (77.051,157.527,45.860)
OP2: (75.066,156.966,47.375)
C2: (70.578,153.488,43.131)
C1': (72.452,154.914,42.487)
C3': (73.007,157.224,42.643)
O5': (74.866,156.847,44.889)
O4': (73.790,155.052,42.918)
C5': (75.376,156.743,43.539)
P: (75.838,156.711,46.142)
C4': (74.266,156.370,42.580)
C2': (71.937,156.292,42.067)
O2': (71.839,156.297,40.659)
N1: (71.681,154.225,43.530)
O4: (69.476,152.324,46.298)
O2: (70.224,153.390,41.966)
C6: (72.040,154.299,44.858)
C5: (71.364,153.677,45.826)
O3': (73.168,158.419,41.862)
Image (generated by PyMOL):