Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01012:02154
Extra
PDB:
ATOM 1 O3' G A1011 56.759 80.179 107.786 1.00 41.05 O
ATOM 2 P G A1012 57.976 80.680 108.704 1.00 40.79 P
ATOM 3 OP1 G A1012 58.588 79.449 109.242 1.00 41.59 O
ATOM 4 OP2 G A1012 57.519 81.745 109.643 1.00 38.65 O
ATOM 5 O5' G A1012 58.990 81.322 107.659 1.00 40.63 O
ATOM 6 C5' G A1012 59.893 80.488 106.917 1.00 40.89 C
ATOM 7 C4' G A1012 60.810 81.328 106.068 1.00 39.83 C
ATOM 8 O4' G A1012 60.046 81.936 104.998 1.00 38.77 O
ATOM 9 C3' G A1012 61.475 82.516 106.745 1.00 39.88 C
ATOM 10 O3' G A1012 62.597 82.181 107.547 1.00 41.88 O
ATOM 11 C2' G A1012 61.855 83.366 105.548 1.00 39.44 C
ATOM 12 O2' G A1012 62.999 82.882 104.875 1.00 39.60 O
ATOM 13 C1' G A1012 60.605 83.202 104.682 1.00 39.32 C
ATOM 14 N9 G A1012 59.638 84.230 105.047 1.00 39.08 N
ATOM 15 C8 G A1012 58.526 84.088 105.837 1.00 38.86 C
ATOM 16 N7 G A1012 57.908 85.216 106.053 1.00 39.77 N
ATOM 17 C5 G A1012 58.647 86.153 105.347 1.00 37.82 C
ATOM 18 C6 G A1012 58.466 87.542 105.215 1.00 38.40 C
ATOM 19 O6 G A1012 57.594 88.256 105.724 1.00 40.00 O
ATOM 20 N1 G A1012 59.431 88.105 104.389 1.00 38.04 N
ATOM 21 C2 G A1012 60.437 87.413 103.766 1.00 38.24 C
ATOM 22 N2 G A1012 61.246 88.117 102.966 1.00 37.65 N
ATOM 23 N3 G A1012 60.629 86.120 103.904 1.00 38.80 N
ATOM 24 C4 G A1012 59.701 85.557 104.701 1.00 38.46 C
ATOM 25 P G A1013 62.945 83.080 108.837 1.00 43.36 P
ATOM 26 OP1 G A1013 63.978 82.355 109.611 1.00 43.59 O
ATOM 27 OP2 G A1013 61.681 83.481 109.504 1.00 42.82 O
ATOM 28 O5' G A1013 63.602 84.397 108.228 1.00 43.39 O
TER
ATOM 1 O3' A B2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 2 P U B2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 3 OP1 U B2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 4 OP2 U B2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 5 O5' U B2154 64.627 86.353 94.608 1.00 38.39 O
ATOM 6 C5' U B2154 64.429 87.761 94.540 1.00 38.16 C
ATOM 7 C4' U B2154 64.553 88.356 95.910 1.00 40.19 C
ATOM 8 O4' U B2154 63.490 87.836 96.740 1.00 40.04 O
ATOM 9 C3' U B2154 65.814 87.993 96.672 1.00 41.51 C
ATOM 10 O3' U B2154 66.912 88.809 96.284 1.00 42.15 O
ATOM 11 C2' U B2154 65.390 88.247 98.111 1.00 41.80 C
ATOM 12 O2' U B2154 65.414 89.623 98.434 1.00 44.27 O
ATOM 13 C1' U B2154 63.937 87.760 98.081 1.00 40.68 C
ATOM 14 N1 U B2154 63.769 86.378 98.546 1.00 39.39 N
ATOM 15 C2 U B2154 63.330 86.181 99.840 1.00 39.04 C
ATOM 16 O2 U B2154 63.022 87.093 100.587 1.00 39.01 O
ATOM 17 N3 U B2154 63.252 84.872 100.228 1.00 39.27 N
ATOM 18 C4 U B2154 63.543 83.767 99.471 1.00 39.48 C
ATOM 19 O4 U B2154 63.509 82.654 99.993 1.00 40.60 O
ATOM 20 C5 U B2154 63.952 84.052 98.133 1.00 39.81 C
ATOM 21 C6 U B2154 64.051 85.314 97.728 1.00 39.13 C
ATOM 22 P C B2155 67.891 88.318 95.109 1.00 44.59 P
ATOM 23 OP1 C B2155 67.757 89.271 93.974 1.00 43.66 O
ATOM 24 OP2 C B2155 67.691 86.862 94.879 1.00 43.20 O
ATOM 25 O5' C B2155 69.341 88.511 95.726 1.00 46.87 O
TER
ATOM 2 P G A1012 57.976 80.680 108.704 1.00 40.79 P
ATOM 3 OP1 G A1012 58.588 79.449 109.242 1.00 41.59 O
ATOM 4 OP2 G A1012 57.519 81.745 109.643 1.00 38.65 O
ATOM 5 O5' G A1012 58.990 81.322 107.659 1.00 40.63 O
ATOM 6 C5' G A1012 59.893 80.488 106.917 1.00 40.89 C
ATOM 7 C4' G A1012 60.810 81.328 106.068 1.00 39.83 C
ATOM 8 O4' G A1012 60.046 81.936 104.998 1.00 38.77 O
ATOM 9 C3' G A1012 61.475 82.516 106.745 1.00 39.88 C
ATOM 10 O3' G A1012 62.597 82.181 107.547 1.00 41.88 O
ATOM 11 C2' G A1012 61.855 83.366 105.548 1.00 39.44 C
ATOM 12 O2' G A1012 62.999 82.882 104.875 1.00 39.60 O
ATOM 13 C1' G A1012 60.605 83.202 104.682 1.00 39.32 C
ATOM 14 N9 G A1012 59.638 84.230 105.047 1.00 39.08 N
ATOM 15 C8 G A1012 58.526 84.088 105.837 1.00 38.86 C
ATOM 16 N7 G A1012 57.908 85.216 106.053 1.00 39.77 N
ATOM 17 C5 G A1012 58.647 86.153 105.347 1.00 37.82 C
ATOM 18 C6 G A1012 58.466 87.542 105.215 1.00 38.40 C
ATOM 19 O6 G A1012 57.594 88.256 105.724 1.00 40.00 O
ATOM 20 N1 G A1012 59.431 88.105 104.389 1.00 38.04 N
ATOM 21 C2 G A1012 60.437 87.413 103.766 1.00 38.24 C
ATOM 22 N2 G A1012 61.246 88.117 102.966 1.00 37.65 N
ATOM 23 N3 G A1012 60.629 86.120 103.904 1.00 38.80 N
ATOM 24 C4 G A1012 59.701 85.557 104.701 1.00 38.46 C
ATOM 25 P G A1013 62.945 83.080 108.837 1.00 43.36 P
ATOM 26 OP1 G A1013 63.978 82.355 109.611 1.00 43.59 O
ATOM 27 OP2 G A1013 61.681 83.481 109.504 1.00 42.82 O
ATOM 28 O5' G A1013 63.602 84.397 108.228 1.00 43.39 O
TER
ATOM 1 O3' A B2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 2 P U B2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 3 OP1 U B2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 4 OP2 U B2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 5 O5' U B2154 64.627 86.353 94.608 1.00 38.39 O
ATOM 6 C5' U B2154 64.429 87.761 94.540 1.00 38.16 C
ATOM 7 C4' U B2154 64.553 88.356 95.910 1.00 40.19 C
ATOM 8 O4' U B2154 63.490 87.836 96.740 1.00 40.04 O
ATOM 9 C3' U B2154 65.814 87.993 96.672 1.00 41.51 C
ATOM 10 O3' U B2154 66.912 88.809 96.284 1.00 42.15 O
ATOM 11 C2' U B2154 65.390 88.247 98.111 1.00 41.80 C
ATOM 12 O2' U B2154 65.414 89.623 98.434 1.00 44.27 O
ATOM 13 C1' U B2154 63.937 87.760 98.081 1.00 40.68 C
ATOM 14 N1 U B2154 63.769 86.378 98.546 1.00 39.39 N
ATOM 15 C2 U B2154 63.330 86.181 99.840 1.00 39.04 C
ATOM 16 O2 U B2154 63.022 87.093 100.587 1.00 39.01 O
ATOM 17 N3 U B2154 63.252 84.872 100.228 1.00 39.27 N
ATOM 18 C4 U B2154 63.543 83.767 99.471 1.00 39.48 C
ATOM 19 O4 U B2154 63.509 82.654 99.993 1.00 40.60 O
ATOM 20 C5 U B2154 63.952 84.052 98.133 1.00 39.81 C
ATOM 21 C6 U B2154 64.051 85.314 97.728 1.00 39.13 C
ATOM 22 P C B2155 67.891 88.318 95.109 1.00 44.59 P
ATOM 23 OP1 C B2155 67.757 89.271 93.974 1.00 43.66 O
ATOM 24 OP2 C B2155 67.691 86.862 94.879 1.00 43.20 O
ATOM 25 O5' C B2155 69.341 88.511 95.726 1.00 46.87 O
TER
Atoms:
OP1: (58.588,79.449,109.242)
OP2: (57.519,81.745,109.643)
C3': (61.475,82.516,106.745)
C1': (60.605,83.202,104.682)
C5': (59.893,80.488,106.917)
O6: (57.594,88.256,105.724)
O4': (60.046,81.936,104.998)
C8: (58.526,84.088,105.837)
C2: (60.437,87.413,103.766)
C6: (58.466,87.542,105.215)
C5: (58.647,86.153,105.347)
C4: (59.701,85.557,104.701)
P: (57.976,80.680,108.704)
C4': (60.810,81.328,106.068)
C2': (61.855,83.366,105.548)
O2': (62.999,82.882,104.875)
N1: (59.431,88.105,104.389)
N2: (61.246,88.117,102.966)
N3: (60.629,86.120,103.904)
N7: (57.908,85.216,106.053)
N9: (59.638,84.230,105.047)
O5': (58.990,81.322,107.659)
O3': (62.597,82.181,107.547)
OP2: (57.519,81.745,109.643)
C3': (61.475,82.516,106.745)
C1': (60.605,83.202,104.682)
C5': (59.893,80.488,106.917)
O6: (57.594,88.256,105.724)
O4': (60.046,81.936,104.998)
C8: (58.526,84.088,105.837)
C2: (60.437,87.413,103.766)
C6: (58.466,87.542,105.215)
C5: (58.647,86.153,105.347)
C4: (59.701,85.557,104.701)
P: (57.976,80.680,108.704)
C4': (60.810,81.328,106.068)
C2': (61.855,83.366,105.548)
O2': (62.999,82.882,104.875)
N1: (59.431,88.105,104.389)
N2: (61.246,88.117,102.966)
N3: (60.629,86.120,103.904)
N7: (57.908,85.216,106.053)
N9: (59.638,84.230,105.047)
O5': (58.990,81.322,107.659)
O3': (62.597,82.181,107.547)
C4: (63.543,83.767,99.471)
N3: (63.252,84.872,100.228)
OP1: (64.786,85.841,92.161)
OP2: (64.314,84.010,93.895)
C2: (63.330,86.181,99.840)
C1': (63.937,87.760,98.081)
C3': (65.814,87.993,96.672)
O5': (64.627,86.353,94.608)
O4': (63.490,87.836,96.740)
C5': (64.429,87.761,94.540)
P: (64.139,85.409,93.427)
C4': (64.553,88.356,95.910)
C2': (65.390,88.247,98.111)
O2': (65.414,89.623,98.434)
N1: (63.769,86.378,98.546)
O4: (63.509,82.654,99.993)
O2: (63.022,87.093,100.587)
C6: (64.051,85.314,97.728)
C5: (63.952,84.052,98.133)
O3': (66.912,88.809,96.284)
N3: (63.252,84.872,100.228)
OP1: (64.786,85.841,92.161)
OP2: (64.314,84.010,93.895)
C2: (63.330,86.181,99.840)
C1': (63.937,87.760,98.081)
C3': (65.814,87.993,96.672)
O5': (64.627,86.353,94.608)
O4': (63.490,87.836,96.740)
C5': (64.429,87.761,94.540)
P: (64.139,85.409,93.427)
C4': (64.553,88.356,95.910)
C2': (65.390,88.247,98.111)
O2': (65.414,89.623,98.434)
N1: (63.769,86.378,98.546)
O4: (63.509,82.654,99.993)
O2: (63.022,87.093,100.587)
C6: (64.051,85.314,97.728)
C5: (63.952,84.052,98.133)
O3': (66.912,88.809,96.284)
Image (generated by PyMOL):