Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:041:0111
Extra
PDB:
ATOM 1 O3' G A 40 62.613 144.345 40.968 1.00 41.45 O
ATOM 2 P G A 41 61.861 145.726 41.270 1.00 42.08 P
ATOM 3 OP1 G A 41 60.968 145.514 42.438 1.00 41.78 O
ATOM 4 OP2 G A 41 61.288 146.226 39.998 1.00 41.53 O
ATOM 5 O5' G A 41 63.043 146.707 41.695 1.00 42.29 O
ATOM 6 C5' G A 41 63.766 146.511 42.925 1.00 41.22 C
ATOM 7 C4' G A 41 64.923 147.481 43.023 1.00 39.77 C
ATOM 8 O4' G A 41 65.764 147.322 41.852 1.00 40.67 O
ATOM 9 C3' G A 41 64.609 148.969 43.029 1.00 38.34 C
ATOM 10 O3' G A 41 64.222 149.437 44.313 1.00 39.48 O
ATOM 11 C2' G A 41 65.947 149.553 42.613 1.00 39.60 C
ATOM 12 O2' G A 41 66.898 149.516 43.653 1.00 41.87 O
ATOM 13 C1' G A 41 66.374 148.561 41.534 1.00 40.49 C
ATOM 14 N9 G A 41 65.887 148.998 40.232 1.00 41.20 N
ATOM 15 C8 G A 41 64.895 148.433 39.472 1.00 40.63 C
ATOM 16 N7 G A 41 64.639 149.106 38.386 1.00 41.50 N
ATOM 17 C5 G A 41 65.528 150.170 38.425 1.00 42.35 C
ATOM 18 C6 G A 41 65.714 151.246 37.525 1.00 42.45 C
ATOM 19 O6 G A 41 65.107 151.486 36.480 1.00 42.33 O
ATOM 20 N1 G A 41 66.725 152.098 37.950 1.00 42.09 N
ATOM 21 C2 G A 41 67.462 151.935 39.093 1.00 42.53 C
ATOM 22 N2 G A 41 68.395 152.857 39.332 1.00 43.77 N
ATOM 23 N3 G A 41 67.296 150.942 39.941 1.00 42.79 N
ATOM 24 C4 G A 41 66.318 150.104 39.548 1.00 42.06 C
ATOM 25 P A A 42 63.491 150.867 44.461 1.00 41.96 P
ATOM 26 OP1 A A 42 63.211 151.062 45.903 1.00 40.11 O
ATOM 27 OP2 A A 42 62.376 150.975 43.480 1.00 40.17 O
ATOM 28 O5' A A 42 64.617 151.910 44.048 1.00 40.95 O
TER
ATOM 1 O3' A B 110 75.747 154.976 45.799 1.00 40.01 O
ATOM 2 P U B 111 75.435 156.553 45.780 1.00 40.64 P
ATOM 3 OP1 U B 111 76.723 157.227 45.485 1.00 40.05 O
ATOM 4 OP2 U B 111 74.696 156.910 47.012 1.00 39.03 O
ATOM 5 O5' U B 111 74.455 156.721 44.529 1.00 40.73 O
ATOM 6 C5' U B 111 74.962 156.681 43.168 1.00 41.76 C
ATOM 7 C4' U B 111 73.856 156.333 42.186 1.00 42.28 C
ATOM 8 O4' U B 111 73.466 154.956 42.362 1.00 44.19 O
ATOM 9 C3' U B 111 72.560 157.127 42.289 1.00 42.37 C
ATOM 10 O3' U B 111 72.663 158.315 41.498 1.00 42.23 O
ATOM 11 C2' U B 111 71.527 156.181 41.682 1.00 42.96 C
ATOM 12 O2' U B 111 71.407 156.280 40.283 1.00 45.02 O
ATOM 13 C1' U B 111 72.106 154.806 42.017 1.00 44.41 C
ATOM 14 N1 U B 111 71.414 154.083 43.090 1.00 47.33 N
ATOM 15 C2 U B 111 70.390 153.226 42.726 1.00 49.37 C
ATOM 16 O2 U B 111 70.047 153.042 41.568 1.00 51.88 O
ATOM 17 N3 U B 111 69.778 152.588 43.768 1.00 49.84 N
ATOM 18 C4 U B 111 70.074 152.713 45.100 1.00 49.90 C
ATOM 19 O4 U B 111 69.390 152.108 45.926 1.00 51.75 O
ATOM 20 C5 U B 111 71.147 153.609 45.393 1.00 49.08 C
ATOM 21 C6 U B 111 71.761 154.248 44.403 1.00 47.28 C
ATOM 22 P C B 112 71.796 159.622 41.858 1.00 42.63 P
ATOM 23 OP1 C B 112 70.847 159.319 42.956 1.00 44.43 O
ATOM 24 OP2 C B 112 71.265 160.172 40.591 1.00 42.74 O
ATOM 25 O5' C B 112 72.911 160.621 42.396 1.00 42.59 O
TER
ATOM 2 P G A 41 61.861 145.726 41.270 1.00 42.08 P
ATOM 3 OP1 G A 41 60.968 145.514 42.438 1.00 41.78 O
ATOM 4 OP2 G A 41 61.288 146.226 39.998 1.00 41.53 O
ATOM 5 O5' G A 41 63.043 146.707 41.695 1.00 42.29 O
ATOM 6 C5' G A 41 63.766 146.511 42.925 1.00 41.22 C
ATOM 7 C4' G A 41 64.923 147.481 43.023 1.00 39.77 C
ATOM 8 O4' G A 41 65.764 147.322 41.852 1.00 40.67 O
ATOM 9 C3' G A 41 64.609 148.969 43.029 1.00 38.34 C
ATOM 10 O3' G A 41 64.222 149.437 44.313 1.00 39.48 O
ATOM 11 C2' G A 41 65.947 149.553 42.613 1.00 39.60 C
ATOM 12 O2' G A 41 66.898 149.516 43.653 1.00 41.87 O
ATOM 13 C1' G A 41 66.374 148.561 41.534 1.00 40.49 C
ATOM 14 N9 G A 41 65.887 148.998 40.232 1.00 41.20 N
ATOM 15 C8 G A 41 64.895 148.433 39.472 1.00 40.63 C
ATOM 16 N7 G A 41 64.639 149.106 38.386 1.00 41.50 N
ATOM 17 C5 G A 41 65.528 150.170 38.425 1.00 42.35 C
ATOM 18 C6 G A 41 65.714 151.246 37.525 1.00 42.45 C
ATOM 19 O6 G A 41 65.107 151.486 36.480 1.00 42.33 O
ATOM 20 N1 G A 41 66.725 152.098 37.950 1.00 42.09 N
ATOM 21 C2 G A 41 67.462 151.935 39.093 1.00 42.53 C
ATOM 22 N2 G A 41 68.395 152.857 39.332 1.00 43.77 N
ATOM 23 N3 G A 41 67.296 150.942 39.941 1.00 42.79 N
ATOM 24 C4 G A 41 66.318 150.104 39.548 1.00 42.06 C
ATOM 25 P A A 42 63.491 150.867 44.461 1.00 41.96 P
ATOM 26 OP1 A A 42 63.211 151.062 45.903 1.00 40.11 O
ATOM 27 OP2 A A 42 62.376 150.975 43.480 1.00 40.17 O
ATOM 28 O5' A A 42 64.617 151.910 44.048 1.00 40.95 O
TER
ATOM 1 O3' A B 110 75.747 154.976 45.799 1.00 40.01 O
ATOM 2 P U B 111 75.435 156.553 45.780 1.00 40.64 P
ATOM 3 OP1 U B 111 76.723 157.227 45.485 1.00 40.05 O
ATOM 4 OP2 U B 111 74.696 156.910 47.012 1.00 39.03 O
ATOM 5 O5' U B 111 74.455 156.721 44.529 1.00 40.73 O
ATOM 6 C5' U B 111 74.962 156.681 43.168 1.00 41.76 C
ATOM 7 C4' U B 111 73.856 156.333 42.186 1.00 42.28 C
ATOM 8 O4' U B 111 73.466 154.956 42.362 1.00 44.19 O
ATOM 9 C3' U B 111 72.560 157.127 42.289 1.00 42.37 C
ATOM 10 O3' U B 111 72.663 158.315 41.498 1.00 42.23 O
ATOM 11 C2' U B 111 71.527 156.181 41.682 1.00 42.96 C
ATOM 12 O2' U B 111 71.407 156.280 40.283 1.00 45.02 O
ATOM 13 C1' U B 111 72.106 154.806 42.017 1.00 44.41 C
ATOM 14 N1 U B 111 71.414 154.083 43.090 1.00 47.33 N
ATOM 15 C2 U B 111 70.390 153.226 42.726 1.00 49.37 C
ATOM 16 O2 U B 111 70.047 153.042 41.568 1.00 51.88 O
ATOM 17 N3 U B 111 69.778 152.588 43.768 1.00 49.84 N
ATOM 18 C4 U B 111 70.074 152.713 45.100 1.00 49.90 C
ATOM 19 O4 U B 111 69.390 152.108 45.926 1.00 51.75 O
ATOM 20 C5 U B 111 71.147 153.609 45.393 1.00 49.08 C
ATOM 21 C6 U B 111 71.761 154.248 44.403 1.00 47.28 C
ATOM 22 P C B 112 71.796 159.622 41.858 1.00 42.63 P
ATOM 23 OP1 C B 112 70.847 159.319 42.956 1.00 44.43 O
ATOM 24 OP2 C B 112 71.265 160.172 40.591 1.00 42.74 O
ATOM 25 O5' C B 112 72.911 160.621 42.396 1.00 42.59 O
TER
Atoms:
OP1: (60.968,145.514,42.438)
OP2: (61.288,146.226,39.998)
C3': (64.609,148.969,43.029)
C1': (66.374,148.561,41.534)
C5': (63.766,146.511,42.925)
O6: (65.107,151.486,36.480)
O4': (65.764,147.322,41.852)
C8: (64.895,148.433,39.472)
C2: (67.462,151.935,39.093)
C6: (65.714,151.246,37.525)
C5: (65.528,150.170,38.425)
C4: (66.318,150.104,39.548)
P: (61.861,145.726,41.270)
C4': (64.923,147.481,43.023)
C2': (65.947,149.553,42.613)
O2': (66.898,149.516,43.653)
N1: (66.725,152.098,37.950)
N2: (68.395,152.857,39.332)
N3: (67.296,150.942,39.941)
N7: (64.639,149.106,38.386)
N9: (65.887,148.998,40.232)
O5': (63.043,146.707,41.695)
O3': (64.222,149.437,44.313)
OP2: (61.288,146.226,39.998)
C3': (64.609,148.969,43.029)
C1': (66.374,148.561,41.534)
C5': (63.766,146.511,42.925)
O6: (65.107,151.486,36.480)
O4': (65.764,147.322,41.852)
C8: (64.895,148.433,39.472)
C2: (67.462,151.935,39.093)
C6: (65.714,151.246,37.525)
C5: (65.528,150.170,38.425)
C4: (66.318,150.104,39.548)
P: (61.861,145.726,41.270)
C4': (64.923,147.481,43.023)
C2': (65.947,149.553,42.613)
O2': (66.898,149.516,43.653)
N1: (66.725,152.098,37.950)
N2: (68.395,152.857,39.332)
N3: (67.296,150.942,39.941)
N7: (64.639,149.106,38.386)
N9: (65.887,148.998,40.232)
O5': (63.043,146.707,41.695)
O3': (64.222,149.437,44.313)
C4: (70.074,152.713,45.100)
N3: (69.778,152.588,43.768)
OP1: (76.723,157.227,45.485)
OP2: (74.696,156.910,47.012)
C2: (70.390,153.226,42.726)
C1': (72.106,154.806,42.017)
C3': (72.560,157.127,42.289)
O5': (74.455,156.721,44.529)
O4': (73.466,154.956,42.362)
C5': (74.962,156.681,43.168)
P: (75.435,156.553,45.780)
C4': (73.856,156.333,42.186)
C2': (71.527,156.181,41.682)
O2': (71.407,156.280,40.283)
N1: (71.414,154.083,43.090)
O4: (69.390,152.108,45.926)
O2: (70.047,153.042,41.568)
C6: (71.761,154.248,44.403)
C5: (71.147,153.609,45.393)
O3': (72.663,158.315,41.498)
N3: (69.778,152.588,43.768)
OP1: (76.723,157.227,45.485)
OP2: (74.696,156.910,47.012)
C2: (70.390,153.226,42.726)
C1': (72.106,154.806,42.017)
C3': (72.560,157.127,42.289)
O5': (74.455,156.721,44.529)
O4': (73.466,154.956,42.362)
C5': (74.962,156.681,43.168)
P: (75.435,156.553,45.780)
C4': (73.856,156.333,42.186)
C2': (71.527,156.181,41.682)
O2': (71.407,156.280,40.283)
N1: (71.414,154.083,43.090)
O4: (69.390,152.108,45.926)
O2: (70.047,153.042,41.568)
C6: (71.761,154.248,44.403)
C5: (71.147,153.609,45.393)
O3': (72.663,158.315,41.498)
Image (generated by PyMOL):