Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A462:A463
Extra
PDB:
ATOM 1 O3' C A 461 -43.295 -60.545 24.950 1.00 0.01 O
ATOM 2 P G A 462 -42.365 -59.243 24.829 1.00 1.36 P
ATOM 3 OP1 G A 462 -42.580 -58.705 23.450 1.00 1.36 O
ATOM 4 OP2 G A 462 -40.977 -59.622 25.257 1.00 1.36 O
ATOM 5 O5' G A 462 -42.983 -58.263 25.894 1.00 1.36 O
ATOM 6 C5' G A 462 -44.191 -57.611 25.625 1.00 1.36 C
ATOM 7 C4' G A 462 -44.748 -56.993 26.859 1.00 1.36 C
ATOM 8 O4' G A 462 -44.802 -57.971 27.930 1.00 1.36 O
ATOM 9 C3' G A 462 -43.937 -55.878 27.484 1.00 1.36 C
ATOM 10 O3' G A 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 11 C2' G A 462 -44.623 -55.784 28.837 1.00 1.36 C
ATOM 12 O2' G A 462 -45.911 -55.183 28.722 1.00 1.36 O
ATOM 13 C1' G A 462 -44.799 -57.282 29.164 1.00 1.36 C
ATOM 14 N9 G A 462 -43.685 -57.758 29.993 1.00 1.32 N
ATOM 15 C8 G A 462 -42.484 -58.326 29.688 1.00 1.32 C
ATOM 16 N7 G A 462 -41.715 -58.494 30.743 1.00 1.32 N
ATOM 17 C5 G A 462 -42.437 -57.964 31.792 1.00 1.32 C
ATOM 18 C6 G A 462 -42.131 -57.826 33.165 1.00 1.32 C
ATOM 19 O6 G A 462 -41.134 -58.143 33.829 1.00 1.32 O
ATOM 20 N1 G A 462 -43.169 -57.203 33.819 1.00 1.32 N
ATOM 21 C2 G A 462 -44.334 -56.780 33.247 1.00 1.32 C
ATOM 22 N2 G A 462 -45.219 -56.225 34.065 1.00 1.32 N
ATOM 23 N3 G A 462 -44.637 -56.898 31.982 1.00 1.32 N
ATOM 24 C4 G A 462 -43.636 -57.493 31.329 1.00 1.32 C
ATOM 25 P U A 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 26 OP1 U A 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 27 OP2 U A 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 28 O5' U A 463 -41.993 -53.480 27.676 1.00 0.01 O
TER
ATOM 1 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 2 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 3 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 4 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 5 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
ATOM 6 C5' U B 463 -40.626 -53.169 27.840 1.00 0.01 C
ATOM 7 C4' U B 463 -40.442 -52.124 28.894 1.00 0.01 C
ATOM 8 O4' U B 463 -41.143 -50.928 28.512 1.00 0.01 O
ATOM 9 C3' U B 463 -40.999 -52.477 30.240 1.00 0.01 C
ATOM 10 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 11 C2' U B 463 -41.276 -51.127 30.851 1.00 0.01 C
ATOM 12 O2' U B 463 -40.086 -50.605 31.411 1.00 0.01 O
ATOM 13 C1' U B 463 -41.654 -50.290 29.630 1.00 0.01 C
ATOM 14 N1 U B 463 -43.084 -50.163 29.443 1.00 0.01 N
ATOM 15 C2 U B 463 -43.782 -49.457 30.353 1.00 0.01 C
ATOM 16 O2 U B 463 -43.236 -48.980 31.330 1.00 0.01 O
ATOM 17 N3 U B 463 -45.124 -49.368 30.090 1.00 0.01 N
ATOM 18 C4 U B 463 -45.795 -49.898 29.017 1.00 0.01 C
ATOM 19 O4 U B 463 -47.009 -49.753 28.907 1.00 0.01 O
ATOM 20 C5 U B 463 -44.973 -50.585 28.104 1.00 0.01 C
ATOM 21 C6 U B 463 -43.677 -50.670 28.343 1.00 0.01 C
ATOM 22 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 23 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 24 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 25 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
TER
ATOM 2 P G A 462 -42.365 -59.243 24.829 1.00 1.36 P
ATOM 3 OP1 G A 462 -42.580 -58.705 23.450 1.00 1.36 O
ATOM 4 OP2 G A 462 -40.977 -59.622 25.257 1.00 1.36 O
ATOM 5 O5' G A 462 -42.983 -58.263 25.894 1.00 1.36 O
ATOM 6 C5' G A 462 -44.191 -57.611 25.625 1.00 1.36 C
ATOM 7 C4' G A 462 -44.748 -56.993 26.859 1.00 1.36 C
ATOM 8 O4' G A 462 -44.802 -57.971 27.930 1.00 1.36 O
ATOM 9 C3' G A 462 -43.937 -55.878 27.484 1.00 1.36 C
ATOM 10 O3' G A 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 11 C2' G A 462 -44.623 -55.784 28.837 1.00 1.36 C
ATOM 12 O2' G A 462 -45.911 -55.183 28.722 1.00 1.36 O
ATOM 13 C1' G A 462 -44.799 -57.282 29.164 1.00 1.36 C
ATOM 14 N9 G A 462 -43.685 -57.758 29.993 1.00 1.32 N
ATOM 15 C8 G A 462 -42.484 -58.326 29.688 1.00 1.32 C
ATOM 16 N7 G A 462 -41.715 -58.494 30.743 1.00 1.32 N
ATOM 17 C5 G A 462 -42.437 -57.964 31.792 1.00 1.32 C
ATOM 18 C6 G A 462 -42.131 -57.826 33.165 1.00 1.32 C
ATOM 19 O6 G A 462 -41.134 -58.143 33.829 1.00 1.32 O
ATOM 20 N1 G A 462 -43.169 -57.203 33.819 1.00 1.32 N
ATOM 21 C2 G A 462 -44.334 -56.780 33.247 1.00 1.32 C
ATOM 22 N2 G A 462 -45.219 -56.225 34.065 1.00 1.32 N
ATOM 23 N3 G A 462 -44.637 -56.898 31.982 1.00 1.32 N
ATOM 24 C4 G A 462 -43.636 -57.493 31.329 1.00 1.32 C
ATOM 25 P U A 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 26 OP1 U A 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 27 OP2 U A 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 28 O5' U A 463 -41.993 -53.480 27.676 1.00 0.01 O
TER
ATOM 1 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 2 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 3 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 4 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 5 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
ATOM 6 C5' U B 463 -40.626 -53.169 27.840 1.00 0.01 C
ATOM 7 C4' U B 463 -40.442 -52.124 28.894 1.00 0.01 C
ATOM 8 O4' U B 463 -41.143 -50.928 28.512 1.00 0.01 O
ATOM 9 C3' U B 463 -40.999 -52.477 30.240 1.00 0.01 C
ATOM 10 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 11 C2' U B 463 -41.276 -51.127 30.851 1.00 0.01 C
ATOM 12 O2' U B 463 -40.086 -50.605 31.411 1.00 0.01 O
ATOM 13 C1' U B 463 -41.654 -50.290 29.630 1.00 0.01 C
ATOM 14 N1 U B 463 -43.084 -50.163 29.443 1.00 0.01 N
ATOM 15 C2 U B 463 -43.782 -49.457 30.353 1.00 0.01 C
ATOM 16 O2 U B 463 -43.236 -48.980 31.330 1.00 0.01 O
ATOM 17 N3 U B 463 -45.124 -49.368 30.090 1.00 0.01 N
ATOM 18 C4 U B 463 -45.795 -49.898 29.017 1.00 0.01 C
ATOM 19 O4 U B 463 -47.009 -49.753 28.907 1.00 0.01 O
ATOM 20 C5 U B 463 -44.973 -50.585 28.104 1.00 0.01 C
ATOM 21 C6 U B 463 -43.677 -50.670 28.343 1.00 0.01 C
ATOM 22 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 23 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 24 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 25 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
TER
Atoms:
OP1: (-42.580,-58.705,23.450)
OP2: (-40.977,-59.622,25.257)
C3': (-43.937,-55.878,27.484)
C1': (-44.799,-57.282,29.164)
C5': (-44.191,-57.611,25.625)
O6: (-41.134,-58.143,33.829)
O4': (-44.802,-57.971,27.930)
C8: (-42.484,-58.326,29.688)
C2: (-44.334,-56.780,33.247)
C6: (-42.131,-57.826,33.165)
C5: (-42.437,-57.964,31.792)
C4: (-43.636,-57.493,31.329)
P: (-42.365,-59.243,24.829)
C4': (-44.748,-56.993,26.859)
C2': (-44.623,-55.784,28.837)
O2': (-45.911,-55.183,28.722)
N1: (-43.169,-57.203,33.819)
N2: (-45.219,-56.225,34.065)
N3: (-44.637,-56.898,31.982)
N7: (-41.715,-58.494,30.743)
N9: (-43.685,-57.758,29.993)
O5': (-42.983,-58.263,25.894)
O3': (-43.926,-54.668,26.731)
OP2: (-40.977,-59.622,25.257)
C3': (-43.937,-55.878,27.484)
C1': (-44.799,-57.282,29.164)
C5': (-44.191,-57.611,25.625)
O6: (-41.134,-58.143,33.829)
O4': (-44.802,-57.971,27.930)
C8: (-42.484,-58.326,29.688)
C2: (-44.334,-56.780,33.247)
C6: (-42.131,-57.826,33.165)
C5: (-42.437,-57.964,31.792)
C4: (-43.636,-57.493,31.329)
P: (-42.365,-59.243,24.829)
C4': (-44.748,-56.993,26.859)
C2': (-44.623,-55.784,28.837)
O2': (-45.911,-55.183,28.722)
N1: (-43.169,-57.203,33.819)
N2: (-45.219,-56.225,34.065)
N3: (-44.637,-56.898,31.982)
N7: (-41.715,-58.494,30.743)
N9: (-43.685,-57.758,29.993)
O5': (-42.983,-58.263,25.894)
O3': (-43.926,-54.668,26.731)
C4: (-45.795,-49.898,29.017)
N3: (-45.124,-49.368,30.090)
OP1: (-42.816,-52.860,25.407)
OP2: (-41.655,-55.070,25.830)
C2: (-43.782,-49.457,30.353)
C1': (-41.654,-50.290,29.630)
C3': (-40.999,-52.477,30.240)
O5': (-41.993,-53.480,27.676)
O4': (-41.143,-50.928,28.512)
C5': (-40.626,-53.169,27.840)
P: (-42.528,-54.000,26.307)
C4': (-40.442,-52.124,28.894)
C2': (-41.276,-51.127,30.851)
O2': (-40.086,-50.605,31.411)
N1: (-43.084,-50.163,29.443)
O4: (-47.009,-49.753,28.907)
O2: (-43.236,-48.980,31.330)
C6: (-43.677,-50.670,28.343)
C5: (-44.973,-50.585,28.104)
O3': (-40.087,-53.248,30.983)
N3: (-45.124,-49.368,30.090)
OP1: (-42.816,-52.860,25.407)
OP2: (-41.655,-55.070,25.830)
C2: (-43.782,-49.457,30.353)
C1': (-41.654,-50.290,29.630)
C3': (-40.999,-52.477,30.240)
O5': (-41.993,-53.480,27.676)
O4': (-41.143,-50.928,28.512)
C5': (-40.626,-53.169,27.840)
P: (-42.528,-54.000,26.307)
C4': (-40.442,-52.124,28.894)
C2': (-41.276,-51.127,30.851)
O2': (-40.086,-50.605,31.411)
N1: (-43.084,-50.163,29.443)
O4: (-47.009,-49.753,28.907)
O2: (-43.236,-48.980,31.330)
C6: (-43.677,-50.670,28.343)
C5: (-44.973,-50.585,28.104)
O3': (-40.087,-53.248,30.983)
Image (generated by PyMOL):