Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.251 99.038 111.962 1.00 53.92 O
ATOM 2 P C A1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C A1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C A1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C A1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C A1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C A1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C A1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C A1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C A1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C A1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C A1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C A1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C A1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C A1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C A1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C A1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C A1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C A1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C A1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
TER
ATOM 1 O3' U B2015 42.042 108.517 110.087 1.00 35.54 O
ATOM 2 P G B2016 43.245 107.849 109.269 1.00 34.88 P
ATOM 3 OP1 G B2016 42.879 106.420 109.129 1.00 38.03 O
ATOM 4 OP2 G B2016 44.522 108.219 109.915 1.00 37.30 O
ATOM 5 O5' G B2016 43.214 108.551 107.839 1.00 37.27 O
ATOM 6 C5' G B2016 42.124 108.368 106.920 1.00 33.65 C
ATOM 7 C4' G B2016 42.242 109.364 105.788 1.00 35.23 C
ATOM 8 O4' G B2016 42.195 110.713 106.325 1.00 35.63 O
ATOM 9 C3' G B2016 43.561 109.317 105.039 1.00 34.38 C
ATOM 10 O3' G B2016 43.553 108.284 104.064 1.00 36.47 O
ATOM 11 C2' G B2016 43.664 110.719 104.447 1.00 35.20 C
ATOM 12 O2' G B2016 42.926 110.941 103.271 1.00 35.50 O
ATOM 13 C1' G B2016 43.035 111.564 105.553 1.00 36.33 C
ATOM 14 N9 G B2016 44.030 112.184 106.422 1.00 37.57 N
ATOM 15 C8 G B2016 44.585 111.663 107.567 1.00 37.12 C
ATOM 16 N7 G B2016 45.464 112.457 108.117 1.00 37.33 N
ATOM 17 C5 G B2016 45.496 113.566 107.287 1.00 36.82 C
ATOM 18 C6 G B2016 46.271 114.749 107.363 1.00 36.19 C
ATOM 19 O6 G B2016 47.121 115.055 108.197 1.00 38.27 O
ATOM 20 N1 G B2016 45.979 115.621 106.320 1.00 34.13 N
ATOM 21 C2 G B2016 45.068 115.382 105.329 1.00 33.01 C
ATOM 22 N2 G B2016 44.918 116.345 104.424 1.00 34.90 N
ATOM 23 N3 G B2016 44.352 114.279 105.234 1.00 35.06 N
ATOM 24 C4 G B2016 44.612 113.420 106.240 1.00 37.41 C
ATOM 25 P C B2017 44.822 107.302 103.923 1.00 38.50 P
ATOM 26 OP1 C B2017 44.399 106.220 103.016 1.00 33.16 O
ATOM 27 OP2 C B2017 45.322 106.962 105.278 1.00 38.56 O
ATOM 28 O5' C B2017 45.922 108.203 103.198 1.00 38.39 O
TER
ATOM 2 P C A1086 46.711 99.063 111.286 1.00 53.10 P
ATOM 3 OP1 C A1086 46.597 99.832 110.026 1.00 54.71 O
ATOM 4 OP2 C A1086 47.276 97.685 111.255 1.00 51.17 O
ATOM 5 O5' C A1086 47.561 99.944 112.301 1.00 53.58 O
ATOM 6 C5' C A1086 48.915 99.607 112.630 1.00 50.24 C
ATOM 7 C4' C A1086 49.670 100.856 112.973 1.00 49.58 C
ATOM 8 O4' C A1086 49.800 101.663 111.777 1.00 49.23 O
ATOM 9 C3' C A1086 48.971 101.764 113.974 1.00 50.02 C
ATOM 10 O3' C A1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 11 C2' C A1086 49.573 103.127 113.650 1.00 50.64 C
ATOM 12 O2' C A1086 50.835 103.333 114.259 1.00 50.28 O
ATOM 13 C1' C A1086 49.743 103.038 112.126 1.00 49.91 C
ATOM 14 N1 C A1086 48.685 103.692 111.324 1.00 49.66 N
ATOM 15 C2 C A1086 48.426 105.064 111.514 1.00 50.82 C
ATOM 16 O2 C A1086 49.092 105.698 112.353 1.00 52.87 O
ATOM 17 N3 C A1086 47.465 105.663 110.770 1.00 48.50 N
ATOM 18 C4 C A1086 46.792 104.958 109.858 1.00 46.98 C
ATOM 19 N4 C A1086 45.876 105.595 109.127 1.00 46.57 N
ATOM 20 C5 C A1086 47.032 103.572 109.649 1.00 46.47 C
ATOM 21 C6 C A1086 47.971 102.983 110.398 1.00 47.76 C
ATOM 22 P U A1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 23 OP1 U A1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 24 OP2 U A1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 25 O5' U A1087 47.104 102.362 116.222 1.00 49.70 O
TER
ATOM 1 O3' U B2015 42.042 108.517 110.087 1.00 35.54 O
ATOM 2 P G B2016 43.245 107.849 109.269 1.00 34.88 P
ATOM 3 OP1 G B2016 42.879 106.420 109.129 1.00 38.03 O
ATOM 4 OP2 G B2016 44.522 108.219 109.915 1.00 37.30 O
ATOM 5 O5' G B2016 43.214 108.551 107.839 1.00 37.27 O
ATOM 6 C5' G B2016 42.124 108.368 106.920 1.00 33.65 C
ATOM 7 C4' G B2016 42.242 109.364 105.788 1.00 35.23 C
ATOM 8 O4' G B2016 42.195 110.713 106.325 1.00 35.63 O
ATOM 9 C3' G B2016 43.561 109.317 105.039 1.00 34.38 C
ATOM 10 O3' G B2016 43.553 108.284 104.064 1.00 36.47 O
ATOM 11 C2' G B2016 43.664 110.719 104.447 1.00 35.20 C
ATOM 12 O2' G B2016 42.926 110.941 103.271 1.00 35.50 O
ATOM 13 C1' G B2016 43.035 111.564 105.553 1.00 36.33 C
ATOM 14 N9 G B2016 44.030 112.184 106.422 1.00 37.57 N
ATOM 15 C8 G B2016 44.585 111.663 107.567 1.00 37.12 C
ATOM 16 N7 G B2016 45.464 112.457 108.117 1.00 37.33 N
ATOM 17 C5 G B2016 45.496 113.566 107.287 1.00 36.82 C
ATOM 18 C6 G B2016 46.271 114.749 107.363 1.00 36.19 C
ATOM 19 O6 G B2016 47.121 115.055 108.197 1.00 38.27 O
ATOM 20 N1 G B2016 45.979 115.621 106.320 1.00 34.13 N
ATOM 21 C2 G B2016 45.068 115.382 105.329 1.00 33.01 C
ATOM 22 N2 G B2016 44.918 116.345 104.424 1.00 34.90 N
ATOM 23 N3 G B2016 44.352 114.279 105.234 1.00 35.06 N
ATOM 24 C4 G B2016 44.612 113.420 106.240 1.00 37.41 C
ATOM 25 P C B2017 44.822 107.302 103.923 1.00 38.50 P
ATOM 26 OP1 C B2017 44.399 106.220 103.016 1.00 33.16 O
ATOM 27 OP2 C B2017 45.322 106.962 105.278 1.00 38.56 O
ATOM 28 O5' C B2017 45.922 108.203 103.198 1.00 38.39 O
TER
Atoms:
C2: (48.426,105.064,111.514)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
OP1: (46.597,99.832,110.026)
OP2: (47.276,97.685,111.255)
C4: (46.792,104.958,109.858)
O5': (47.561,99.944,112.301)
C3': (48.971,101.764,113.974)
C1': (49.743,103.038,112.126)
O4': (49.800,101.663,111.777)
C5': (48.915,99.607,112.630)
P: (46.711,99.063,111.286)
O2: (49.092,105.698,112.353)
C4': (49.670,100.856,112.973)
C2': (49.573,103.127,113.650)
O2': (50.835,103.333,114.259)
N1: (48.685,103.692,111.324)
N3: (47.465,105.663,110.770)
N4: (45.876,105.595,109.127)
C6: (47.971,102.983,110.398)
C5: (47.032,103.572,109.649)
O3': (49.251,101.371,115.323)
OP1: (42.879,106.420,109.129)
OP2: (44.522,108.219,109.915)
C3': (43.561,109.317,105.039)
C1': (43.035,111.564,105.553)
C5': (42.124,108.368,106.920)
O6: (47.121,115.055,108.197)
O4': (42.195,110.713,106.325)
C8: (44.585,111.663,107.567)
C2: (45.068,115.382,105.329)
C6: (46.271,114.749,107.363)
C5: (45.496,113.566,107.287)
C4: (44.612,113.420,106.240)
P: (43.245,107.849,109.269)
C4': (42.242,109.364,105.788)
C2': (43.664,110.719,104.447)
O2': (42.926,110.941,103.271)
N1: (45.979,115.621,106.320)
N2: (44.918,116.345,104.424)
N3: (44.352,114.279,105.234)
N7: (45.464,112.457,108.117)
N9: (44.030,112.184,106.422)
O5': (43.214,108.551,107.839)
O3': (43.553,108.284,104.064)
OP2: (44.522,108.219,109.915)
C3': (43.561,109.317,105.039)
C1': (43.035,111.564,105.553)
C5': (42.124,108.368,106.920)
O6: (47.121,115.055,108.197)
O4': (42.195,110.713,106.325)
C8: (44.585,111.663,107.567)
C2: (45.068,115.382,105.329)
C6: (46.271,114.749,107.363)
C5: (45.496,113.566,107.287)
C4: (44.612,113.420,106.240)
P: (43.245,107.849,109.269)
C4': (42.242,109.364,105.788)
C2': (43.664,110.719,104.447)
O2': (42.926,110.941,103.271)
N1: (45.979,115.621,106.320)
N2: (44.918,116.345,104.424)
N3: (44.352,114.279,105.234)
N7: (45.464,112.457,108.117)
N9: (44.030,112.184,106.422)
O5': (43.214,108.551,107.839)
O3': (43.553,108.284,104.064)
Image (generated by PyMOL):