Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.645 98.204 111.556 1.00 48.33 O
ATOM 2 P C A1086 47.124 98.220 110.925 1.00 49.53 P
ATOM 3 OP1 C A1086 47.063 99.015 109.669 1.00 52.08 O
ATOM 4 OP2 C A1086 47.634 96.819 110.886 1.00 48.20 O
ATOM 5 O5' C A1086 47.972 99.057 111.983 1.00 48.19 O
ATOM 6 C5' C A1086 49.334 98.715 112.298 1.00 46.56 C
ATOM 7 C4' C A1086 50.096 99.961 112.670 1.00 47.11 C
ATOM 8 O4' C A1086 50.295 100.764 111.478 1.00 47.64 O
ATOM 9 C3' C A1086 49.376 100.883 113.643 1.00 47.87 C
ATOM 10 O3' C A1086 49.610 100.497 114.999 1.00 48.69 O
ATOM 11 C2' C A1086 49.999 102.237 113.326 1.00 47.59 C
ATOM 12 O2' C A1086 51.263 102.405 113.934 1.00 48.42 O
ATOM 13 C1' C A1086 50.190 102.140 111.807 1.00 47.25 C
ATOM 14 N1 C A1086 49.099 102.739 111.002 1.00 46.34 N
ATOM 15 C2 C A1086 48.812 104.105 111.152 1.00 46.23 C
ATOM 16 O2 C A1086 49.492 104.784 111.943 1.00 47.87 O
ATOM 17 N3 C A1086 47.809 104.653 110.424 1.00 44.47 N
ATOM 18 C4 C A1086 47.126 103.902 109.558 1.00 43.49 C
ATOM 19 N4 C A1086 46.165 104.491 108.847 1.00 42.16 N
ATOM 20 C5 C A1086 47.402 102.516 109.379 1.00 43.42 C
ATOM 21 C6 C A1086 48.380 101.979 110.118 1.00 44.97 C
ATOM 22 P U A1087 48.369 100.178 115.979 1.00 49.73 P
ATOM 23 OP1 U A1087 48.920 100.135 117.360 1.00 50.03 O
ATOM 24 OP2 U A1087 47.625 99.006 115.453 1.00 46.68 O
ATOM 25 O5' U A1087 47.420 101.453 115.861 1.00 49.40 O
TER
ATOM 1 O3' U B2015 42.332 107.587 109.968 1.00 35.09 O
ATOM 2 P G B2016 43.523 106.868 109.166 1.00 34.57 P
ATOM 3 OP1 G B2016 43.135 105.445 108.947 1.00 33.88 O
ATOM 4 OP2 G B2016 44.808 107.174 109.857 1.00 36.85 O
ATOM 5 O5' G B2016 43.531 107.614 107.751 1.00 35.89 O
ATOM 6 C5' G B2016 42.454 107.452 106.805 1.00 33.52 C
ATOM 7 C4' G B2016 42.600 108.446 105.669 1.00 35.35 C
ATOM 8 O4' G B2016 42.515 109.800 106.185 1.00 36.41 O
ATOM 9 C3' G B2016 43.930 108.417 104.941 1.00 36.25 C
ATOM 10 O3' G B2016 43.915 107.397 103.954 1.00 38.35 O
ATOM 11 C2' G B2016 44.010 109.813 104.333 1.00 35.78 C
ATOM 12 O2' G B2016 43.285 109.964 103.129 1.00 35.05 O
ATOM 13 C1' G B2016 43.353 110.661 105.427 1.00 35.30 C
ATOM 14 N9 G B2016 44.328 111.280 106.324 1.00 34.05 N
ATOM 15 C8 G B2016 44.874 110.734 107.461 1.00 32.54 C
ATOM 16 N7 G B2016 45.770 111.504 108.019 1.00 32.73 N
ATOM 17 C5 G B2016 45.811 112.630 107.212 1.00 32.28 C
ATOM 18 C6 G B2016 46.609 113.794 107.306 1.00 32.50 C
ATOM 19 O6 G B2016 47.468 114.070 108.148 1.00 35.09 O
ATOM 20 N1 G B2016 46.330 114.693 106.280 1.00 32.91 N
ATOM 21 C2 G B2016 45.399 114.494 105.292 1.00 31.90 C
ATOM 22 N2 G B2016 45.256 115.486 104.407 1.00 32.19 N
ATOM 23 N3 G B2016 44.659 113.405 105.184 1.00 32.14 N
ATOM 24 C4 G B2016 44.914 112.520 106.171 1.00 33.03 C
ATOM 25 P C B2017 45.173 106.409 103.804 1.00 40.80 P
ATOM 26 OP1 C B2017 44.728 105.372 102.844 1.00 39.15 O
ATOM 27 OP2 C B2017 45.652 105.996 105.159 1.00 39.68 O
ATOM 28 O5' C B2017 46.286 107.336 103.132 1.00 40.22 O
TER
ATOM 2 P C A1086 47.124 98.220 110.925 1.00 49.53 P
ATOM 3 OP1 C A1086 47.063 99.015 109.669 1.00 52.08 O
ATOM 4 OP2 C A1086 47.634 96.819 110.886 1.00 48.20 O
ATOM 5 O5' C A1086 47.972 99.057 111.983 1.00 48.19 O
ATOM 6 C5' C A1086 49.334 98.715 112.298 1.00 46.56 C
ATOM 7 C4' C A1086 50.096 99.961 112.670 1.00 47.11 C
ATOM 8 O4' C A1086 50.295 100.764 111.478 1.00 47.64 O
ATOM 9 C3' C A1086 49.376 100.883 113.643 1.00 47.87 C
ATOM 10 O3' C A1086 49.610 100.497 114.999 1.00 48.69 O
ATOM 11 C2' C A1086 49.999 102.237 113.326 1.00 47.59 C
ATOM 12 O2' C A1086 51.263 102.405 113.934 1.00 48.42 O
ATOM 13 C1' C A1086 50.190 102.140 111.807 1.00 47.25 C
ATOM 14 N1 C A1086 49.099 102.739 111.002 1.00 46.34 N
ATOM 15 C2 C A1086 48.812 104.105 111.152 1.00 46.23 C
ATOM 16 O2 C A1086 49.492 104.784 111.943 1.00 47.87 O
ATOM 17 N3 C A1086 47.809 104.653 110.424 1.00 44.47 N
ATOM 18 C4 C A1086 47.126 103.902 109.558 1.00 43.49 C
ATOM 19 N4 C A1086 46.165 104.491 108.847 1.00 42.16 N
ATOM 20 C5 C A1086 47.402 102.516 109.379 1.00 43.42 C
ATOM 21 C6 C A1086 48.380 101.979 110.118 1.00 44.97 C
ATOM 22 P U A1087 48.369 100.178 115.979 1.00 49.73 P
ATOM 23 OP1 U A1087 48.920 100.135 117.360 1.00 50.03 O
ATOM 24 OP2 U A1087 47.625 99.006 115.453 1.00 46.68 O
ATOM 25 O5' U A1087 47.420 101.453 115.861 1.00 49.40 O
TER
ATOM 1 O3' U B2015 42.332 107.587 109.968 1.00 35.09 O
ATOM 2 P G B2016 43.523 106.868 109.166 1.00 34.57 P
ATOM 3 OP1 G B2016 43.135 105.445 108.947 1.00 33.88 O
ATOM 4 OP2 G B2016 44.808 107.174 109.857 1.00 36.85 O
ATOM 5 O5' G B2016 43.531 107.614 107.751 1.00 35.89 O
ATOM 6 C5' G B2016 42.454 107.452 106.805 1.00 33.52 C
ATOM 7 C4' G B2016 42.600 108.446 105.669 1.00 35.35 C
ATOM 8 O4' G B2016 42.515 109.800 106.185 1.00 36.41 O
ATOM 9 C3' G B2016 43.930 108.417 104.941 1.00 36.25 C
ATOM 10 O3' G B2016 43.915 107.397 103.954 1.00 38.35 O
ATOM 11 C2' G B2016 44.010 109.813 104.333 1.00 35.78 C
ATOM 12 O2' G B2016 43.285 109.964 103.129 1.00 35.05 O
ATOM 13 C1' G B2016 43.353 110.661 105.427 1.00 35.30 C
ATOM 14 N9 G B2016 44.328 111.280 106.324 1.00 34.05 N
ATOM 15 C8 G B2016 44.874 110.734 107.461 1.00 32.54 C
ATOM 16 N7 G B2016 45.770 111.504 108.019 1.00 32.73 N
ATOM 17 C5 G B2016 45.811 112.630 107.212 1.00 32.28 C
ATOM 18 C6 G B2016 46.609 113.794 107.306 1.00 32.50 C
ATOM 19 O6 G B2016 47.468 114.070 108.148 1.00 35.09 O
ATOM 20 N1 G B2016 46.330 114.693 106.280 1.00 32.91 N
ATOM 21 C2 G B2016 45.399 114.494 105.292 1.00 31.90 C
ATOM 22 N2 G B2016 45.256 115.486 104.407 1.00 32.19 N
ATOM 23 N3 G B2016 44.659 113.405 105.184 1.00 32.14 N
ATOM 24 C4 G B2016 44.914 112.520 106.171 1.00 33.03 C
ATOM 25 P C B2017 45.173 106.409 103.804 1.00 40.80 P
ATOM 26 OP1 C B2017 44.728 105.372 102.844 1.00 39.15 O
ATOM 27 OP2 C B2017 45.652 105.996 105.159 1.00 39.68 O
ATOM 28 O5' C B2017 46.286 107.336 103.132 1.00 40.22 O
TER
Atoms:
C2: (48.812,104.105,111.152)
OP1: (47.063,99.015,109.669)
OP2: (47.634,96.819,110.886)
C4: (47.126,103.902,109.558)
O5': (47.972,99.057,111.983)
C3': (49.376,100.883,113.643)
C1': (50.190,102.140,111.807)
O4': (50.295,100.764,111.478)
C5': (49.334,98.715,112.298)
P: (47.124,98.220,110.925)
O2: (49.492,104.784,111.943)
C4': (50.096,99.961,112.670)
C2': (49.999,102.237,113.326)
O2': (51.263,102.405,113.934)
N1: (49.099,102.739,111.002)
N3: (47.809,104.653,110.424)
N4: (46.165,104.491,108.847)
C6: (48.380,101.979,110.118)
C5: (47.402,102.516,109.379)
O3': (49.610,100.497,114.999)
OP1: (47.063,99.015,109.669)
OP2: (47.634,96.819,110.886)
C4: (47.126,103.902,109.558)
O5': (47.972,99.057,111.983)
C3': (49.376,100.883,113.643)
C1': (50.190,102.140,111.807)
O4': (50.295,100.764,111.478)
C5': (49.334,98.715,112.298)
P: (47.124,98.220,110.925)
O2: (49.492,104.784,111.943)
C4': (50.096,99.961,112.670)
C2': (49.999,102.237,113.326)
O2': (51.263,102.405,113.934)
N1: (49.099,102.739,111.002)
N3: (47.809,104.653,110.424)
N4: (46.165,104.491,108.847)
C6: (48.380,101.979,110.118)
C5: (47.402,102.516,109.379)
O3': (49.610,100.497,114.999)
OP1: (43.135,105.445,108.947)
OP2: (44.808,107.174,109.857)
C3': (43.930,108.417,104.941)
C1': (43.353,110.661,105.427)
C5': (42.454,107.452,106.805)
O6: (47.468,114.070,108.148)
O4': (42.515,109.800,106.185)
C8: (44.874,110.734,107.461)
C2: (45.399,114.494,105.292)
C6: (46.609,113.794,107.306)
C5: (45.811,112.630,107.212)
C4: (44.914,112.520,106.171)
P: (43.523,106.868,109.166)
C4': (42.600,108.446,105.669)
C2': (44.010,109.813,104.333)
O2': (43.285,109.964,103.129)
N1: (46.330,114.693,106.280)
N2: (45.256,115.486,104.407)
N3: (44.659,113.405,105.184)
N7: (45.770,111.504,108.019)
N9: (44.328,111.280,106.324)
O5': (43.531,107.614,107.751)
O3': (43.915,107.397,103.954)
OP2: (44.808,107.174,109.857)
C3': (43.930,108.417,104.941)
C1': (43.353,110.661,105.427)
C5': (42.454,107.452,106.805)
O6: (47.468,114.070,108.148)
O4': (42.515,109.800,106.185)
C8: (44.874,110.734,107.461)
C2: (45.399,114.494,105.292)
C6: (46.609,113.794,107.306)
C5: (45.811,112.630,107.212)
C4: (44.914,112.520,106.171)
P: (43.523,106.868,109.166)
C4': (42.600,108.446,105.669)
C2': (44.010,109.813,104.333)
O2': (43.285,109.964,103.129)
N1: (46.330,114.693,106.280)
N2: (45.256,115.486,104.407)
N3: (44.659,113.405,105.184)
N7: (45.770,111.504,108.019)
N9: (44.328,111.280,106.324)
O5': (43.531,107.614,107.751)
O3': (43.915,107.397,103.954)
Image (generated by PyMOL):