Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.625 98.347 111.473 1.00 45.39 O
ATOM 2 P C A1086 47.099 98.380 110.831 1.00 47.85 P
ATOM 3 OP1 C A1086 47.023 99.191 109.585 1.00 50.12 O
ATOM 4 OP2 C A1086 47.633 96.988 110.772 1.00 46.57 O
ATOM 5 O5' C A1086 47.949 99.203 111.900 1.00 46.79 O
ATOM 6 C5' C A1086 49.323 98.875 112.183 1.00 42.98 C
ATOM 7 C4' C A1086 50.074 100.128 112.550 1.00 43.05 C
ATOM 8 O4' C A1086 50.240 100.944 111.365 1.00 43.27 O
ATOM 9 C3' C A1086 49.339 101.020 113.536 1.00 42.58 C
ATOM 10 O3' C A1086 49.613 100.622 114.879 1.00 43.09 O
ATOM 11 C2' C A1086 49.894 102.402 113.220 1.00 42.38 C
ATOM 12 O2' C A1086 51.137 102.655 113.838 1.00 45.08 O
ATOM 13 C1' C A1086 50.101 102.315 111.705 1.00 42.79 C
ATOM 14 N1 C A1086 49.019 102.902 110.885 1.00 42.39 N
ATOM 15 C2 C A1086 48.699 104.263 111.045 1.00 42.15 C
ATOM 16 O2 C A1086 49.333 104.944 111.872 1.00 44.26 O
ATOM 17 N3 C A1086 47.715 104.802 110.290 1.00 41.41 N
ATOM 18 C4 C A1086 47.075 104.052 109.392 1.00 40.09 C
ATOM 19 N4 C A1086 46.135 104.639 108.648 1.00 41.13 N
ATOM 20 C5 C A1086 47.374 102.669 109.210 1.00 40.51 C
ATOM 21 C6 C A1086 48.338 102.139 109.972 1.00 41.34 C
ATOM 22 P U A1087 48.400 100.293 115.885 1.00 43.32 P
ATOM 23 OP1 U A1087 48.950 100.216 117.265 1.00 43.66 O
ATOM 24 OP2 U A1087 47.627 99.147 115.334 1.00 39.73 O
ATOM 25 O5' U A1087 47.467 101.576 115.811 1.00 42.90 O
TER
ATOM 1 O3' U B2015 42.381 107.765 109.839 1.00 31.36 O
ATOM 2 P G B2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G B2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G B2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G B2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G B2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G B2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G B2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G B2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G B2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G B2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G B2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G B2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G B2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G B2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G B2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G B2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G B2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G B2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G B2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G B2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G B2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G B2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G B2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C B2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C B2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C B2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C B2017 46.364 107.511 102.982 1.00 36.32 O
TER
ATOM 2 P C A1086 47.099 98.380 110.831 1.00 47.85 P
ATOM 3 OP1 C A1086 47.023 99.191 109.585 1.00 50.12 O
ATOM 4 OP2 C A1086 47.633 96.988 110.772 1.00 46.57 O
ATOM 5 O5' C A1086 47.949 99.203 111.900 1.00 46.79 O
ATOM 6 C5' C A1086 49.323 98.875 112.183 1.00 42.98 C
ATOM 7 C4' C A1086 50.074 100.128 112.550 1.00 43.05 C
ATOM 8 O4' C A1086 50.240 100.944 111.365 1.00 43.27 O
ATOM 9 C3' C A1086 49.339 101.020 113.536 1.00 42.58 C
ATOM 10 O3' C A1086 49.613 100.622 114.879 1.00 43.09 O
ATOM 11 C2' C A1086 49.894 102.402 113.220 1.00 42.38 C
ATOM 12 O2' C A1086 51.137 102.655 113.838 1.00 45.08 O
ATOM 13 C1' C A1086 50.101 102.315 111.705 1.00 42.79 C
ATOM 14 N1 C A1086 49.019 102.902 110.885 1.00 42.39 N
ATOM 15 C2 C A1086 48.699 104.263 111.045 1.00 42.15 C
ATOM 16 O2 C A1086 49.333 104.944 111.872 1.00 44.26 O
ATOM 17 N3 C A1086 47.715 104.802 110.290 1.00 41.41 N
ATOM 18 C4 C A1086 47.075 104.052 109.392 1.00 40.09 C
ATOM 19 N4 C A1086 46.135 104.639 108.648 1.00 41.13 N
ATOM 20 C5 C A1086 47.374 102.669 109.210 1.00 40.51 C
ATOM 21 C6 C A1086 48.338 102.139 109.972 1.00 41.34 C
ATOM 22 P U A1087 48.400 100.293 115.885 1.00 43.32 P
ATOM 23 OP1 U A1087 48.950 100.216 117.265 1.00 43.66 O
ATOM 24 OP2 U A1087 47.627 99.147 115.334 1.00 39.73 O
ATOM 25 O5' U A1087 47.467 101.576 115.811 1.00 42.90 O
TER
ATOM 1 O3' U B2015 42.381 107.765 109.839 1.00 31.36 O
ATOM 2 P G B2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G B2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G B2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G B2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G B2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G B2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G B2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G B2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G B2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G B2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G B2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G B2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G B2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G B2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G B2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G B2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G B2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G B2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G B2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G B2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G B2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G B2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G B2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C B2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C B2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C B2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C B2017 46.364 107.511 102.982 1.00 36.32 O
TER
Atoms:
C2: (48.699,104.263,111.045)
OP1: (47.023,99.191,109.585)
OP2: (47.633,96.988,110.772)
C4: (47.075,104.052,109.392)
O5': (47.949,99.203,111.900)
C3': (49.339,101.020,113.536)
C1': (50.101,102.315,111.705)
O4': (50.240,100.944,111.365)
C5': (49.323,98.875,112.183)
P: (47.099,98.380,110.831)
O2: (49.333,104.944,111.872)
C4': (50.074,100.128,112.550)
C2': (49.894,102.402,113.220)
O2': (51.137,102.655,113.838)
N1: (49.019,102.902,110.885)
N3: (47.715,104.802,110.290)
N4: (46.135,104.639,108.648)
C6: (48.338,102.139,109.972)
C5: (47.374,102.669,109.210)
O3': (49.613,100.622,114.879)
OP1: (47.023,99.191,109.585)
OP2: (47.633,96.988,110.772)
C4: (47.075,104.052,109.392)
O5': (47.949,99.203,111.900)
C3': (49.339,101.020,113.536)
C1': (50.101,102.315,111.705)
O4': (50.240,100.944,111.365)
C5': (49.323,98.875,112.183)
P: (47.099,98.380,110.831)
O2: (49.333,104.944,111.872)
C4': (50.074,100.128,112.550)
C2': (49.894,102.402,113.220)
O2': (51.137,102.655,113.838)
N1: (49.019,102.902,110.885)
N3: (47.715,104.802,110.290)
N4: (46.135,104.639,108.648)
C6: (48.338,102.139,109.972)
C5: (47.374,102.669,109.210)
O3': (49.613,100.622,114.879)
OP1: (43.171,105.644,108.775)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
Image (generated by PyMOL):