Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.666 98.327 111.712 1.00 52.68 O
ATOM 2 P C A1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 3 OP1 C A1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 4 OP2 C A1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 5 O5' C A1086 47.973 99.217 112.172 1.00 52.41 O
ATOM 6 C5' C A1086 49.327 98.854 112.498 1.00 51.02 C
ATOM 7 C4' C A1086 50.122 100.091 112.823 1.00 51.43 C
ATOM 8 O4' C A1086 50.329 100.858 111.606 1.00 51.52 O
ATOM 9 C3' C A1086 49.444 101.061 113.782 1.00 51.72 C
ATOM 10 O3' C A1086 49.676 100.705 115.145 1.00 51.74 O
ATOM 11 C2' C A1086 50.110 102.382 113.421 1.00 52.55 C
ATOM 12 O2' C A1086 51.392 102.520 114.005 1.00 54.83 O
ATOM 13 C1' C A1086 50.268 102.243 111.901 1.00 51.97 C
ATOM 14 N1 C A1086 49.176 102.848 111.107 1.00 51.24 N
ATOM 15 C2 C A1086 48.859 104.200 111.306 1.00 51.82 C
ATOM 16 O2 C A1086 49.509 104.858 112.135 1.00 54.18 O
ATOM 17 N3 C A1086 47.860 104.756 110.586 1.00 51.24 N
ATOM 18 C4 C A1086 47.199 104.028 109.688 1.00 50.79 C
ATOM 19 N4 C A1086 46.236 104.629 108.991 1.00 50.61 N
ATOM 20 C5 C A1086 47.501 102.654 109.462 1.00 51.22 C
ATOM 21 C6 C A1086 48.483 102.109 110.188 1.00 51.00 C
ATOM 22 P U A1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 23 OP1 U A1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 24 OP2 U A1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 25 O5' U A1087 47.460 101.582 115.992 1.00 50.64 O
TER
ATOM 1 O3' U B2015 42.377 107.734 110.080 1.00 34.72 O
ATOM 2 P G B2016 43.585 107.012 109.309 1.00 34.66 P
ATOM 3 OP1 G B2016 43.178 105.600 109.101 1.00 35.34 O
ATOM 4 OP2 G B2016 44.858 107.305 110.018 1.00 37.65 O
ATOM 5 O5' G B2016 43.616 107.733 107.881 1.00 36.95 O
ATOM 6 C5' G B2016 42.520 107.607 106.954 1.00 34.28 C
ATOM 7 C4' G B2016 42.668 108.604 105.823 1.00 36.33 C
ATOM 8 O4' G B2016 42.586 109.957 106.338 1.00 36.81 O
ATOM 9 C3' G B2016 43.995 108.566 105.089 1.00 36.43 C
ATOM 10 O3' G B2016 43.976 107.537 104.110 1.00 39.62 O
ATOM 11 C2' G B2016 44.082 109.962 104.484 1.00 34.63 C
ATOM 12 O2' G B2016 43.344 110.130 103.299 1.00 35.36 O
ATOM 13 C1' G B2016 43.429 110.811 105.577 1.00 36.42 C
ATOM 14 N9 G B2016 44.406 111.432 106.469 1.00 36.44 N
ATOM 15 C8 G B2016 44.931 110.905 107.624 1.00 34.90 C
ATOM 16 N7 G B2016 45.820 111.680 108.181 1.00 35.97 N
ATOM 17 C5 G B2016 45.880 112.787 107.353 1.00 35.45 C
ATOM 18 C6 G B2016 46.676 113.951 107.441 1.00 36.55 C
ATOM 19 O6 G B2016 47.517 114.245 108.296 1.00 37.72 O
ATOM 20 N1 G B2016 46.419 114.825 106.390 1.00 34.94 N
ATOM 21 C2 G B2016 45.510 114.606 105.387 1.00 34.58 C
ATOM 22 N2 G B2016 45.387 115.572 104.476 1.00 33.41 N
ATOM 23 N3 G B2016 44.770 113.519 105.289 1.00 35.29 N
ATOM 24 C4 G B2016 45.004 112.657 106.298 1.00 36.06 C
ATOM 25 P C B2017 45.247 106.567 103.934 1.00 41.15 P
ATOM 26 OP1 C B2017 44.812 105.558 102.953 1.00 39.28 O
ATOM 27 OP2 C B2017 45.746 106.117 105.270 1.00 41.85 O
ATOM 28 O5' C B2017 46.348 107.515 103.276 1.00 42.23 O
TER
ATOM 2 P C A1086 47.142 98.409 111.082 1.00 54.81 P
ATOM 3 OP1 C A1086 47.053 99.247 109.859 1.00 55.83 O
ATOM 4 OP2 C A1086 47.689 97.027 110.988 1.00 54.29 O
ATOM 5 O5' C A1086 47.973 99.217 112.172 1.00 52.41 O
ATOM 6 C5' C A1086 49.327 98.854 112.498 1.00 51.02 C
ATOM 7 C4' C A1086 50.122 100.091 112.823 1.00 51.43 C
ATOM 8 O4' C A1086 50.329 100.858 111.606 1.00 51.52 O
ATOM 9 C3' C A1086 49.444 101.061 113.782 1.00 51.72 C
ATOM 10 O3' C A1086 49.676 100.705 115.145 1.00 51.74 O
ATOM 11 C2' C A1086 50.110 102.382 113.421 1.00 52.55 C
ATOM 12 O2' C A1086 51.392 102.520 114.005 1.00 54.83 O
ATOM 13 C1' C A1086 50.268 102.243 111.901 1.00 51.97 C
ATOM 14 N1 C A1086 49.176 102.848 111.107 1.00 51.24 N
ATOM 15 C2 C A1086 48.859 104.200 111.306 1.00 51.82 C
ATOM 16 O2 C A1086 49.509 104.858 112.135 1.00 54.18 O
ATOM 17 N3 C A1086 47.860 104.756 110.586 1.00 51.24 N
ATOM 18 C4 C A1086 47.199 104.028 109.688 1.00 50.79 C
ATOM 19 N4 C A1086 46.236 104.629 108.991 1.00 50.61 N
ATOM 20 C5 C A1086 47.501 102.654 109.462 1.00 51.22 C
ATOM 21 C6 C A1086 48.483 102.109 110.188 1.00 51.00 C
ATOM 22 P U A1087 48.441 100.335 116.107 1.00 52.02 P
ATOM 23 OP1 U A1087 48.963 100.285 117.492 1.00 53.60 O
ATOM 24 OP2 U A1087 47.755 99.147 115.546 1.00 48.94 O
ATOM 25 O5' U A1087 47.460 101.582 115.992 1.00 50.64 O
TER
ATOM 1 O3' U B2015 42.377 107.734 110.080 1.00 34.72 O
ATOM 2 P G B2016 43.585 107.012 109.309 1.00 34.66 P
ATOM 3 OP1 G B2016 43.178 105.600 109.101 1.00 35.34 O
ATOM 4 OP2 G B2016 44.858 107.305 110.018 1.00 37.65 O
ATOM 5 O5' G B2016 43.616 107.733 107.881 1.00 36.95 O
ATOM 6 C5' G B2016 42.520 107.607 106.954 1.00 34.28 C
ATOM 7 C4' G B2016 42.668 108.604 105.823 1.00 36.33 C
ATOM 8 O4' G B2016 42.586 109.957 106.338 1.00 36.81 O
ATOM 9 C3' G B2016 43.995 108.566 105.089 1.00 36.43 C
ATOM 10 O3' G B2016 43.976 107.537 104.110 1.00 39.62 O
ATOM 11 C2' G B2016 44.082 109.962 104.484 1.00 34.63 C
ATOM 12 O2' G B2016 43.344 110.130 103.299 1.00 35.36 O
ATOM 13 C1' G B2016 43.429 110.811 105.577 1.00 36.42 C
ATOM 14 N9 G B2016 44.406 111.432 106.469 1.00 36.44 N
ATOM 15 C8 G B2016 44.931 110.905 107.624 1.00 34.90 C
ATOM 16 N7 G B2016 45.820 111.680 108.181 1.00 35.97 N
ATOM 17 C5 G B2016 45.880 112.787 107.353 1.00 35.45 C
ATOM 18 C6 G B2016 46.676 113.951 107.441 1.00 36.55 C
ATOM 19 O6 G B2016 47.517 114.245 108.296 1.00 37.72 O
ATOM 20 N1 G B2016 46.419 114.825 106.390 1.00 34.94 N
ATOM 21 C2 G B2016 45.510 114.606 105.387 1.00 34.58 C
ATOM 22 N2 G B2016 45.387 115.572 104.476 1.00 33.41 N
ATOM 23 N3 G B2016 44.770 113.519 105.289 1.00 35.29 N
ATOM 24 C4 G B2016 45.004 112.657 106.298 1.00 36.06 C
ATOM 25 P C B2017 45.247 106.567 103.934 1.00 41.15 P
ATOM 26 OP1 C B2017 44.812 105.558 102.953 1.00 39.28 O
ATOM 27 OP2 C B2017 45.746 106.117 105.270 1.00 41.85 O
ATOM 28 O5' C B2017 46.348 107.515 103.276 1.00 42.23 O
TER
Atoms:
C2: (48.859,104.200,111.306)
OP1: (47.053,99.247,109.859)
OP2: (47.689,97.027,110.988)
C4: (47.199,104.028,109.688)
O5': (47.973,99.217,112.172)
C3': (49.444,101.061,113.782)
C1': (50.268,102.243,111.901)
O4': (50.329,100.858,111.606)
C5': (49.327,98.854,112.498)
P: (47.142,98.409,111.082)
O2: (49.509,104.858,112.135)
C4': (50.122,100.091,112.823)
C2': (50.110,102.382,113.421)
O2': (51.392,102.520,114.005)
N1: (49.176,102.848,111.107)
N3: (47.860,104.756,110.586)
N4: (46.236,104.629,108.991)
C6: (48.483,102.109,110.188)
C5: (47.501,102.654,109.462)
O3': (49.676,100.705,115.145)
OP1: (47.053,99.247,109.859)
OP2: (47.689,97.027,110.988)
C4: (47.199,104.028,109.688)
O5': (47.973,99.217,112.172)
C3': (49.444,101.061,113.782)
C1': (50.268,102.243,111.901)
O4': (50.329,100.858,111.606)
C5': (49.327,98.854,112.498)
P: (47.142,98.409,111.082)
O2: (49.509,104.858,112.135)
C4': (50.122,100.091,112.823)
C2': (50.110,102.382,113.421)
O2': (51.392,102.520,114.005)
N1: (49.176,102.848,111.107)
N3: (47.860,104.756,110.586)
N4: (46.236,104.629,108.991)
C6: (48.483,102.109,110.188)
C5: (47.501,102.654,109.462)
O3': (49.676,100.705,115.145)
OP1: (43.178,105.600,109.101)
OP2: (44.858,107.305,110.018)
C3': (43.995,108.566,105.089)
C1': (43.429,110.811,105.577)
C5': (42.520,107.607,106.954)
O6: (47.517,114.245,108.296)
O4': (42.586,109.957,106.338)
C8: (44.931,110.905,107.624)
C2: (45.510,114.606,105.387)
C6: (46.676,113.951,107.441)
C5: (45.880,112.787,107.353)
C4: (45.004,112.657,106.298)
P: (43.585,107.012,109.309)
C4': (42.668,108.604,105.823)
C2': (44.082,109.962,104.484)
O2': (43.344,110.130,103.299)
N1: (46.419,114.825,106.390)
N2: (45.387,115.572,104.476)
N3: (44.770,113.519,105.289)
N7: (45.820,111.680,108.181)
N9: (44.406,111.432,106.469)
O5': (43.616,107.733,107.881)
O3': (43.976,107.537,104.110)
OP2: (44.858,107.305,110.018)
C3': (43.995,108.566,105.089)
C1': (43.429,110.811,105.577)
C5': (42.520,107.607,106.954)
O6: (47.517,114.245,108.296)
O4': (42.586,109.957,106.338)
C8: (44.931,110.905,107.624)
C2: (45.510,114.606,105.387)
C6: (46.676,113.951,107.441)
C5: (45.880,112.787,107.353)
C4: (45.004,112.657,106.298)
P: (43.585,107.012,109.309)
C4': (42.668,108.604,105.823)
C2': (44.082,109.962,104.484)
O2': (43.344,110.130,103.299)
N1: (46.419,114.825,106.390)
N2: (45.387,115.572,104.476)
N3: (44.770,113.519,105.289)
N7: (45.820,111.680,108.181)
N9: (44.406,111.432,106.469)
O5': (43.616,107.733,107.881)
O3': (43.976,107.537,104.110)
Image (generated by PyMOL):