Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.587 98.261 111.621 1.00 48.94 O
ATOM 2 P C A1086 47.050 98.269 110.969 1.00 47.76 P
ATOM 3 OP1 C A1086 46.952 99.016 109.690 1.00 51.40 O
ATOM 4 OP2 C A1086 47.571 96.881 110.972 1.00 49.00 O
ATOM 5 O5' C A1086 47.907 99.135 111.989 1.00 48.10 O
ATOM 6 C5' C A1086 49.269 98.804 112.292 1.00 44.81 C
ATOM 7 C4' C A1086 50.025 100.058 112.629 1.00 47.39 C
ATOM 8 O4' C A1086 50.194 100.847 111.424 1.00 47.71 O
ATOM 9 C3' C A1086 49.312 100.984 113.603 1.00 48.28 C
ATOM 10 O3' C A1086 49.585 100.613 114.959 1.00 48.92 O
ATOM 11 C2' C A1086 49.920 102.338 113.262 1.00 48.72 C
ATOM 12 O2' C A1086 51.179 102.533 113.874 1.00 52.59 O
ATOM 13 C1' C A1086 50.113 102.224 111.743 1.00 47.96 C
ATOM 14 N1 C A1086 49.040 102.837 110.934 1.00 48.21 N
ATOM 15 C2 C A1086 48.750 104.196 111.115 1.00 49.13 C
ATOM 16 O2 C A1086 49.426 104.857 111.923 1.00 52.36 O
ATOM 17 N3 C A1086 47.751 104.760 110.399 1.00 47.97 N
ATOM 18 C4 C A1086 47.075 104.035 109.511 1.00 46.60 C
ATOM 19 N4 C A1086 46.115 104.645 108.820 1.00 46.47 N
ATOM 20 C5 C A1086 47.358 102.655 109.291 1.00 46.94 C
ATOM 21 C6 C A1086 48.334 102.100 110.021 1.00 48.12 C
ATOM 22 P U A1087 48.379 100.245 115.961 1.00 49.39 P
ATOM 23 OP1 U A1087 48.936 100.209 117.333 1.00 51.37 O
ATOM 24 OP2 U A1087 47.662 99.055 115.434 1.00 46.06 O
ATOM 25 O5' U A1087 47.393 101.490 115.867 1.00 47.52 O
TER
ATOM 1 O3' U B2015 42.248 107.634 109.892 1.00 36.01 O
ATOM 2 P G B2016 43.470 106.899 109.153 1.00 35.96 P
ATOM 3 OP1 G B2016 43.086 105.470 108.971 1.00 35.52 O
ATOM 4 OP2 G B2016 44.734 107.228 109.859 1.00 40.82 O
ATOM 5 O5' G B2016 43.513 107.586 107.710 1.00 38.97 O
ATOM 6 C5' G B2016 42.402 107.487 106.800 1.00 36.07 C
ATOM 7 C4' G B2016 42.555 108.487 105.672 1.00 37.31 C
ATOM 8 O4' G B2016 42.481 109.836 106.195 1.00 37.78 O
ATOM 9 C3' G B2016 43.884 108.441 104.942 1.00 36.96 C
ATOM 10 O3' G B2016 43.843 107.414 103.958 1.00 38.23 O
ATOM 11 C2' G B2016 43.984 109.845 104.350 1.00 35.99 C
ATOM 12 O2' G B2016 43.240 110.044 103.173 1.00 35.50 O
ATOM 13 C1' G B2016 43.335 110.688 105.448 1.00 36.90 C
ATOM 14 N9 G B2016 44.318 111.293 106.346 1.00 37.72 N
ATOM 15 C8 G B2016 44.875 110.740 107.474 1.00 36.00 C
ATOM 16 N7 G B2016 45.778 111.505 108.025 1.00 37.01 N
ATOM 17 C5 G B2016 45.807 112.637 107.226 1.00 36.52 C
ATOM 18 C6 G B2016 46.597 113.807 107.322 1.00 37.99 C
ATOM 19 O6 G B2016 47.461 114.085 108.156 1.00 40.02 O
ATOM 20 N1 G B2016 46.301 114.709 106.304 1.00 36.94 N
ATOM 21 C2 G B2016 45.366 114.509 105.322 1.00 35.09 C
ATOM 22 N2 G B2016 45.214 115.493 104.440 1.00 34.26 N
ATOM 23 N3 G B2016 44.631 113.421 105.218 1.00 35.82 N
ATOM 24 C4 G B2016 44.901 112.532 106.195 1.00 36.79 C
ATOM 25 P C B2017 45.104 106.433 103.757 1.00 40.47 P
ATOM 26 OP1 C B2017 44.635 105.424 102.789 1.00 37.32 O
ATOM 27 OP2 C B2017 45.627 105.987 105.079 1.00 39.64 O
ATOM 28 O5' C B2017 46.201 107.367 103.065 1.00 41.27 O
TER
ATOM 2 P C A1086 47.050 98.269 110.969 1.00 47.76 P
ATOM 3 OP1 C A1086 46.952 99.016 109.690 1.00 51.40 O
ATOM 4 OP2 C A1086 47.571 96.881 110.972 1.00 49.00 O
ATOM 5 O5' C A1086 47.907 99.135 111.989 1.00 48.10 O
ATOM 6 C5' C A1086 49.269 98.804 112.292 1.00 44.81 C
ATOM 7 C4' C A1086 50.025 100.058 112.629 1.00 47.39 C
ATOM 8 O4' C A1086 50.194 100.847 111.424 1.00 47.71 O
ATOM 9 C3' C A1086 49.312 100.984 113.603 1.00 48.28 C
ATOM 10 O3' C A1086 49.585 100.613 114.959 1.00 48.92 O
ATOM 11 C2' C A1086 49.920 102.338 113.262 1.00 48.72 C
ATOM 12 O2' C A1086 51.179 102.533 113.874 1.00 52.59 O
ATOM 13 C1' C A1086 50.113 102.224 111.743 1.00 47.96 C
ATOM 14 N1 C A1086 49.040 102.837 110.934 1.00 48.21 N
ATOM 15 C2 C A1086 48.750 104.196 111.115 1.00 49.13 C
ATOM 16 O2 C A1086 49.426 104.857 111.923 1.00 52.36 O
ATOM 17 N3 C A1086 47.751 104.760 110.399 1.00 47.97 N
ATOM 18 C4 C A1086 47.075 104.035 109.511 1.00 46.60 C
ATOM 19 N4 C A1086 46.115 104.645 108.820 1.00 46.47 N
ATOM 20 C5 C A1086 47.358 102.655 109.291 1.00 46.94 C
ATOM 21 C6 C A1086 48.334 102.100 110.021 1.00 48.12 C
ATOM 22 P U A1087 48.379 100.245 115.961 1.00 49.39 P
ATOM 23 OP1 U A1087 48.936 100.209 117.333 1.00 51.37 O
ATOM 24 OP2 U A1087 47.662 99.055 115.434 1.00 46.06 O
ATOM 25 O5' U A1087 47.393 101.490 115.867 1.00 47.52 O
TER
ATOM 1 O3' U B2015 42.248 107.634 109.892 1.00 36.01 O
ATOM 2 P G B2016 43.470 106.899 109.153 1.00 35.96 P
ATOM 3 OP1 G B2016 43.086 105.470 108.971 1.00 35.52 O
ATOM 4 OP2 G B2016 44.734 107.228 109.859 1.00 40.82 O
ATOM 5 O5' G B2016 43.513 107.586 107.710 1.00 38.97 O
ATOM 6 C5' G B2016 42.402 107.487 106.800 1.00 36.07 C
ATOM 7 C4' G B2016 42.555 108.487 105.672 1.00 37.31 C
ATOM 8 O4' G B2016 42.481 109.836 106.195 1.00 37.78 O
ATOM 9 C3' G B2016 43.884 108.441 104.942 1.00 36.96 C
ATOM 10 O3' G B2016 43.843 107.414 103.958 1.00 38.23 O
ATOM 11 C2' G B2016 43.984 109.845 104.350 1.00 35.99 C
ATOM 12 O2' G B2016 43.240 110.044 103.173 1.00 35.50 O
ATOM 13 C1' G B2016 43.335 110.688 105.448 1.00 36.90 C
ATOM 14 N9 G B2016 44.318 111.293 106.346 1.00 37.72 N
ATOM 15 C8 G B2016 44.875 110.740 107.474 1.00 36.00 C
ATOM 16 N7 G B2016 45.778 111.505 108.025 1.00 37.01 N
ATOM 17 C5 G B2016 45.807 112.637 107.226 1.00 36.52 C
ATOM 18 C6 G B2016 46.597 113.807 107.322 1.00 37.99 C
ATOM 19 O6 G B2016 47.461 114.085 108.156 1.00 40.02 O
ATOM 20 N1 G B2016 46.301 114.709 106.304 1.00 36.94 N
ATOM 21 C2 G B2016 45.366 114.509 105.322 1.00 35.09 C
ATOM 22 N2 G B2016 45.214 115.493 104.440 1.00 34.26 N
ATOM 23 N3 G B2016 44.631 113.421 105.218 1.00 35.82 N
ATOM 24 C4 G B2016 44.901 112.532 106.195 1.00 36.79 C
ATOM 25 P C B2017 45.104 106.433 103.757 1.00 40.47 P
ATOM 26 OP1 C B2017 44.635 105.424 102.789 1.00 37.32 O
ATOM 27 OP2 C B2017 45.627 105.987 105.079 1.00 39.64 O
ATOM 28 O5' C B2017 46.201 107.367 103.065 1.00 41.27 O
TER
Atoms:
C2: (48.750,104.196,111.115)
OP1: (46.952,99.016,109.690)
OP2: (47.571,96.881,110.972)
C4: (47.075,104.035,109.511)
O5': (47.907,99.135,111.989)
C3': (49.312,100.984,113.603)
C1': (50.113,102.224,111.743)
O4': (50.194,100.847,111.424)
C5': (49.269,98.804,112.292)
P: (47.050,98.269,110.969)
O2: (49.426,104.857,111.923)
C4': (50.025,100.058,112.629)
C2': (49.920,102.338,113.262)
O2': (51.179,102.533,113.874)
N1: (49.040,102.837,110.934)
N3: (47.751,104.760,110.399)
N4: (46.115,104.645,108.820)
C6: (48.334,102.100,110.021)
C5: (47.358,102.655,109.291)
O3': (49.585,100.613,114.959)
OP1: (46.952,99.016,109.690)
OP2: (47.571,96.881,110.972)
C4: (47.075,104.035,109.511)
O5': (47.907,99.135,111.989)
C3': (49.312,100.984,113.603)
C1': (50.113,102.224,111.743)
O4': (50.194,100.847,111.424)
C5': (49.269,98.804,112.292)
P: (47.050,98.269,110.969)
O2: (49.426,104.857,111.923)
C4': (50.025,100.058,112.629)
C2': (49.920,102.338,113.262)
O2': (51.179,102.533,113.874)
N1: (49.040,102.837,110.934)
N3: (47.751,104.760,110.399)
N4: (46.115,104.645,108.820)
C6: (48.334,102.100,110.021)
C5: (47.358,102.655,109.291)
O3': (49.585,100.613,114.959)
OP1: (43.086,105.470,108.971)
OP2: (44.734,107.228,109.859)
C3': (43.884,108.441,104.942)
C1': (43.335,110.688,105.448)
C5': (42.402,107.487,106.800)
O6: (47.461,114.085,108.156)
O4': (42.481,109.836,106.195)
C8: (44.875,110.740,107.474)
C2: (45.366,114.509,105.322)
C6: (46.597,113.807,107.322)
C5: (45.807,112.637,107.226)
C4: (44.901,112.532,106.195)
P: (43.470,106.899,109.153)
C4': (42.555,108.487,105.672)
C2': (43.984,109.845,104.350)
O2': (43.240,110.044,103.173)
N1: (46.301,114.709,106.304)
N2: (45.214,115.493,104.440)
N3: (44.631,113.421,105.218)
N7: (45.778,111.505,108.025)
N9: (44.318,111.293,106.346)
O5': (43.513,107.586,107.710)
O3': (43.843,107.414,103.958)
OP2: (44.734,107.228,109.859)
C3': (43.884,108.441,104.942)
C1': (43.335,110.688,105.448)
C5': (42.402,107.487,106.800)
O6: (47.461,114.085,108.156)
O4': (42.481,109.836,106.195)
C8: (44.875,110.740,107.474)
C2: (45.366,114.509,105.322)
C6: (46.597,113.807,107.322)
C5: (45.807,112.637,107.226)
C4: (44.901,112.532,106.195)
P: (43.470,106.899,109.153)
C4': (42.555,108.487,105.672)
C2': (43.984,109.845,104.350)
O2': (43.240,110.044,103.173)
N1: (46.301,114.709,106.304)
N2: (45.214,115.493,104.440)
N3: (44.631,113.421,105.218)
N7: (45.778,111.505,108.025)
N9: (44.318,111.293,106.346)
O5': (43.513,107.586,107.710)
O3': (43.843,107.414,103.958)
Image (generated by PyMOL):