ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02232:02238

Extra

PDB:
ATOM 1 O3' U A2231 63.293 74.039 80.991 1.00 45.27 O
ATOM 2 P C A2232 62.699 75.531 80.965 1.00 47.55 P
ATOM 3 OP1 C A2232 62.954 76.125 79.629 1.00 47.60 O
ATOM 4 OP2 C A2232 63.198 76.221 82.178 1.00 49.59 O
ATOM 5 O5' C A2232 61.131 75.330 81.143 1.00 47.40 O
ATOM 6 C5' C A2232 60.286 76.405 81.617 1.00 45.31 C
ATOM 7 C4' C A2232 58.872 76.212 81.115 1.00 44.08 C
ATOM 8 O4' C A2232 58.857 76.370 79.670 1.00 42.41 O
ATOM 9 C3' C A2232 58.285 74.828 81.391 1.00 44.29 C
ATOM 10 O3' C A2232 56.868 74.923 81.520 1.00 44.75 O
ATOM 11 C2' C A2232 58.628 74.081 80.110 1.00 44.42 C
ATOM 12 O2' C A2232 57.795 72.968 79.890 1.00 45.28 O
ATOM 13 C1' C A2232 58.402 75.178 79.068 1.00 44.08 C
ATOM 14 N1 C A2232 59.111 74.987 77.785 1.00 43.58 N
ATOM 15 C2 C A2232 58.381 74.547 76.675 1.00 43.84 C
ATOM 16 O2 C A2232 57.161 74.364 76.792 1.00 46.21 O
ATOM 17 N3 C A2232 59.021 74.341 75.498 1.00 42.59 N
ATOM 18 C4 C A2232 60.331 74.573 75.402 1.00 42.51 C
ATOM 19 N4 C A2232 60.914 74.364 74.221 1.00 39.83 N
ATOM 20 C5 C A2232 61.100 75.033 76.512 1.00 42.56 C
ATOM 21 C6 C A2232 60.456 75.225 77.674 1.00 45.29 C
ATOM 22 P C A2233 56.203 75.100 82.972 1.00 44.18 P
ATOM 23 OP1 C A2233 55.418 76.355 82.966 1.00 42.99 O
ATOM 24 OP2 C A2233 57.236 74.897 84.016 1.00 42.95 O
ATOM 25 O5' C A2233 55.140 73.912 83.031 1.00 45.24 O
TER

ATOM 1 O3' C B2237 59.846 75.871 70.301 1.00 48.51 O
ATOM 2 P G B2238 60.008 74.286 70.117 1.00 49.60 P
ATOM 3 OP1 G B2238 59.094 73.890 69.019 1.00 50.46 O
ATOM 4 OP2 G B2238 59.916 73.604 71.432 1.00 50.64 O
ATOM 5 O5' G B2238 61.493 74.149 69.570 1.00 48.55 O
ATOM 6 C5' G B2238 61.904 74.883 68.398 1.00 48.73 C
ATOM 7 C4' G B2238 63.316 75.394 68.560 1.00 48.31 C
ATOM 8 O4' G B2238 63.368 76.416 69.592 1.00 49.47 O
ATOM 9 C3' G B2238 64.320 74.362 69.026 1.00 49.76 C
ATOM 10 O3' G B2238 64.745 73.516 67.971 1.00 49.78 O
ATOM 11 C2' G B2238 65.427 75.230 69.613 1.00 50.21 C
ATOM 12 O2' G B2238 66.267 75.812 68.636 1.00 50.47 O
ATOM 13 C1' G B2238 64.607 76.331 70.287 1.00 49.24 C
ATOM 14 N9 G B2238 64.327 76.060 71.695 1.00 49.82 N
ATOM 15 C8 G B2238 63.144 75.605 72.228 1.00 49.84 C
ATOM 16 N7 G B2238 63.186 75.469 73.524 1.00 48.81 N
ATOM 17 C5 G B2238 64.473 75.849 73.871 1.00 47.04 C
ATOM 18 C6 G B2238 65.093 75.917 75.137 1.00 47.17 C
ATOM 19 O6 G B2238 64.622 75.631 76.243 1.00 47.67 O
ATOM 20 N1 G B2238 66.398 76.374 75.042 1.00 47.45 N
ATOM 21 C2 G B2238 67.029 76.718 73.883 1.00 49.15 C
ATOM 22 N2 G B2238 68.292 77.146 74.012 1.00 52.01 N
ATOM 23 N3 G B2238 66.465 76.653 72.687 1.00 49.34 N
ATOM 24 C4 G B2238 65.192 76.216 72.757 1.00 48.17 C
ATOM 25 P A B2239 65.246 72.031 68.310 1.00 52.58 P
ATOM 26 OP1 A B2239 65.437 71.340 67.007 1.00 54.21 O
ATOM 27 OP2 A B2239 64.341 71.438 69.331 1.00 51.64 O
ATOM 28 O5' A B2239 66.668 72.253 68.996 1.00 51.44 O
TER

Atoms:
C2: (58.381,74.547,76.675)
OP1: (62.954,76.125,79.629)
OP2: (63.198,76.221,82.178)
C4: (60.331,74.573,75.402)
O5': (61.131,75.330,81.143)
C3': (58.285,74.828,81.391)
C1': (58.402,75.178,79.068)
O4': (58.857,76.370,79.670)
C5': (60.286,76.405,81.617)
P: (62.699,75.531,80.965)
O2: (57.161,74.364,76.792)
C4': (58.872,76.212,81.115)
C2': (58.628,74.081,80.110)
O2': (57.795,72.968,79.890)
N1: (59.111,74.987,77.785)
N3: (59.021,74.341,75.498)
N4: (60.914,74.364,74.221)
C6: (60.456,75.225,77.674)
C5: (61.100,75.033,76.512)
O3': (56.868,74.923,81.520)
OP1: (59.094,73.890,69.019)
OP2: (59.916,73.604,71.432)
C3': (64.320,74.362,69.026)
C1': (64.607,76.331,70.287)
C5': (61.904,74.883,68.398)
O6: (64.622,75.631,76.243)
O4': (63.368,76.416,69.592)
C8: (63.144,75.605,72.228)
C2: (67.029,76.718,73.883)
C6: (65.093,75.917,75.137)
C5: (64.473,75.849,73.871)
C4: (65.192,76.216,72.757)
P: (60.008,74.286,70.117)
C4': (63.316,75.394,68.560)
C2': (65.427,75.230,69.613)
O2': (66.267,75.812,68.636)
N1: (66.398,76.374,75.042)
N2: (68.292,77.146,74.012)
N3: (66.465,76.653,72.687)
N7: (63.186,75.469,73.524)
N9: (64.327,76.060,71.695)
O5': (61.493,74.149,69.570)
O3': (64.745,73.516,67.971)
Image (generated by PyMOL):
PyMOL image
show in jmol