ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01086:02016

Extra

PDB:
ATOM 1 O3' C A1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 2 P C A1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 3 OP1 C A1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 4 OP2 C A1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 5 O5' C A1086 47.962 99.261 112.149 1.00 52.48 O
ATOM 6 C5' C A1086 49.350 98.987 112.400 1.00 49.81 C
ATOM 7 C4' C A1086 50.069 100.268 112.737 1.00 50.11 C
ATOM 8 O4' C A1086 50.220 101.065 111.537 1.00 49.32 O
ATOM 9 C3' C A1086 49.330 101.166 113.718 1.00 50.87 C
ATOM 10 O3' C A1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 11 C2' C A1086 49.871 102.550 113.374 1.00 50.85 C
ATOM 12 O2' C A1086 51.114 102.834 113.981 1.00 54.82 O
ATOM 13 C1' C A1086 50.078 102.439 111.858 1.00 49.61 C
ATOM 14 N1 C A1086 48.996 103.013 111.033 1.00 48.71 N
ATOM 15 C2 C A1086 48.636 104.358 111.218 1.00 48.55 C
ATOM 16 O2 C A1086 49.250 105.041 112.056 1.00 50.80 O
ATOM 17 N3 C A1086 47.639 104.882 110.469 1.00 46.81 N
ATOM 18 C4 C A1086 47.028 104.133 109.555 1.00 45.19 C
ATOM 19 N4 C A1086 46.065 104.700 108.828 1.00 45.65 N
ATOM 20 C5 C A1086 47.377 102.769 109.341 1.00 46.34 C
ATOM 21 C6 C A1086 48.350 102.252 110.097 1.00 46.81 C
ATOM 22 P U A1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 23 OP1 U A1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 24 OP2 U A1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 25 O5' U A1087 47.441 101.640 116.012 1.00 50.82 O
TER

ATOM 1 O3' U B2015 42.326 107.744 110.079 1.00 38.24 O
ATOM 2 P G B2016 43.540 107.023 109.309 1.00 37.87 P
ATOM 3 OP1 G B2016 43.140 105.612 109.092 1.00 38.81 O
ATOM 4 OP2 G B2016 44.808 107.322 110.034 1.00 42.71 O
ATOM 5 O5' G B2016 43.579 107.747 107.884 1.00 42.67 O
ATOM 6 C5' G B2016 42.509 107.580 106.931 1.00 40.20 C
ATOM 7 C4' G B2016 42.659 108.562 105.788 1.00 41.76 C
ATOM 8 O4' G B2016 42.525 109.924 106.273 1.00 41.43 O
ATOM 9 C3' G B2016 44.000 108.543 105.078 1.00 41.81 C
ATOM 10 O3' G B2016 43.995 107.512 104.102 1.00 45.42 O
ATOM 11 C2' G B2016 44.059 109.932 104.452 1.00 40.49 C
ATOM 12 O2' G B2016 43.322 110.051 103.258 1.00 40.35 O
ATOM 13 C1' G B2016 43.376 110.783 105.527 1.00 40.31 C
ATOM 14 N9 G B2016 44.338 111.399 106.439 1.00 40.23 N
ATOM 15 C8 G B2016 44.849 110.860 107.598 1.00 39.16 C
ATOM 16 N7 G B2016 45.729 111.632 108.177 1.00 39.04 N
ATOM 17 C5 G B2016 45.796 112.753 107.360 1.00 39.82 C
ATOM 18 C6 G B2016 46.592 113.920 107.465 1.00 38.65 C
ATOM 19 O6 G B2016 47.420 114.207 108.324 1.00 40.96 O
ATOM 20 N1 G B2016 46.348 114.801 106.419 1.00 37.44 N
ATOM 21 C2 G B2016 45.458 114.587 105.404 1.00 36.27 C
ATOM 22 N2 G B2016 45.351 115.558 104.500 1.00 36.18 N
ATOM 23 N3 G B2016 44.722 113.503 105.285 1.00 37.62 N
ATOM 24 C4 G B2016 44.937 112.632 106.290 1.00 38.86 C
ATOM 25 P C B2017 45.281 106.570 103.906 1.00 45.27 P
ATOM 26 OP1 C B2017 44.805 105.516 102.990 1.00 43.83 O
ATOM 27 OP2 C B2017 45.843 106.182 105.234 1.00 48.36 O
ATOM 28 O5' C B2017 46.331 107.517 103.163 1.00 45.59 O
TER

Atoms:
C2: (48.636,104.358,111.218)
OP1: (47.055,99.305,109.831)
OP2: (47.698,97.079,110.945)
C4: (47.028,104.133,109.555)
O5': (47.962,99.261,112.149)
C3': (49.330,101.166,113.718)
C1': (50.078,102.439,111.858)
O4': (50.220,101.065,111.537)
C5': (49.350,98.987,112.400)
P: (47.141,98.456,111.047)
O2: (49.250,105.041,112.056)
C4': (50.069,100.268,112.737)
C2': (49.871,102.550,113.374)
O2': (51.114,102.834,113.981)
N1: (48.996,103.013,111.033)
N3: (47.639,104.882,110.469)
N4: (46.065,104.700,108.828)
C6: (48.350,102.252,110.097)
C5: (47.377,102.769,109.341)
O3': (49.629,100.793,115.066)
OP1: (43.140,105.612,109.092)
OP2: (44.808,107.322,110.034)
C3': (44.000,108.543,105.078)
C1': (43.376,110.783,105.527)
C5': (42.509,107.580,106.931)
O6: (47.420,114.207,108.324)
O4': (42.525,109.924,106.273)
C8: (44.849,110.860,107.598)
C2: (45.458,114.587,105.404)
C6: (46.592,113.920,107.465)
C5: (45.796,112.753,107.360)
C4: (44.937,112.632,106.290)
P: (43.540,107.023,109.309)
C4': (42.659,108.562,105.788)
C2': (44.059,109.932,104.452)
O2': (43.322,110.051,103.258)
N1: (46.348,114.801,106.419)
N2: (45.351,115.558,104.500)
N3: (44.722,113.503,105.285)
N7: (45.729,111.632,108.177)
N9: (44.338,111.399,106.439)
O5': (43.579,107.747,107.884)
O3': (43.995,107.512,104.102)
Image (generated by PyMOL):
PyMOL image
show in jmol