Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:058:096
Extra
PDB:
ATOM 1 O3' A A 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 2 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 3 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 4 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 5 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
ATOM 6 C5' U A 58 59.259 166.169 26.238 1.00 42.40 C
ATOM 7 C4' U A 58 57.930 165.514 25.945 1.00 43.79 C
ATOM 8 O4' U A 58 57.932 164.993 24.587 1.00 45.04 O
ATOM 9 C3' U A 58 57.540 164.339 26.835 1.00 44.31 C
ATOM 10 O3' U A 58 56.112 164.317 26.926 1.00 44.23 O
ATOM 11 C2' U A 58 58.014 163.150 26.010 1.00 44.37 C
ATOM 12 O2' U A 58 57.368 161.946 26.350 1.00 46.54 O
ATOM 13 C1' U A 58 57.618 163.617 24.613 1.00 44.63 C
ATOM 14 N1 U A 58 58.278 162.957 23.478 1.00 44.45 N
ATOM 15 C2 U A 58 57.521 162.068 22.726 1.00 44.56 C
ATOM 16 O2 U A 58 56.358 161.794 22.986 1.00 44.84 O
ATOM 17 N3 U A 58 58.178 161.502 21.662 1.00 44.48 N
ATOM 18 C4 U A 58 59.490 161.715 21.287 1.00 45.38 C
ATOM 19 O4 U A 58 59.952 161.098 20.327 1.00 44.26 O
ATOM 20 C5 U A 58 60.208 162.637 22.117 1.00 45.25 C
ATOM 21 C6 U A 58 59.593 163.212 23.158 1.00 45.10 C
ATOM 22 P A A 59 55.385 164.672 28.316 1.00 45.73 P
ATOM 23 OP1 A A 59 54.084 165.315 28.020 1.00 48.14 O
ATOM 24 OP2 A A 59 56.365 165.383 29.187 1.00 46.77 O
ATOM 25 O5' A A 59 55.052 163.239 28.931 1.00 45.79 O
TER
ATOM 1 O3' G B 95 59.286 151.867 15.773 1.00 54.52 O
ATOM 2 P A B 96 60.322 152.388 16.886 1.00 54.71 P
ATOM 3 OP1 A B 96 61.605 152.638 16.181 1.00 55.53 O
ATOM 4 OP2 A B 96 60.291 151.461 18.049 1.00 55.05 O
ATOM 5 O5' A B 96 59.730 153.792 17.350 1.00 50.75 O
ATOM 6 C5' A B 96 59.760 154.919 16.469 1.00 48.78 C
ATOM 7 C4' A B 96 59.464 156.187 17.226 1.00 48.84 C
ATOM 8 O4' A B 96 58.086 156.195 17.679 1.00 49.32 O
ATOM 9 C3' A B 96 60.267 156.403 18.495 1.00 47.65 C
ATOM 10 O3' A B 96 61.566 156.900 18.215 1.00 48.76 O
ATOM 11 C2' A B 96 59.402 157.405 19.243 1.00 46.04 C
ATOM 12 O2' A B 96 59.530 158.709 18.733 1.00 42.92 O
ATOM 13 C1' A B 96 58.001 156.886 18.918 1.00 47.92 C
ATOM 14 N9 A B 96 57.518 155.952 19.934 1.00 48.82 N
ATOM 15 C8 A B 96 57.477 154.581 19.875 1.00 49.06 C
ATOM 16 N7 A B 96 56.996 154.021 20.956 1.00 50.40 N
ATOM 17 C5 A B 96 56.701 155.096 21.784 1.00 50.08 C
ATOM 18 C6 A B 96 56.164 155.173 23.083 1.00 49.96 C
ATOM 19 N6 A B 96 55.810 154.111 23.806 1.00 48.68 N
ATOM 20 N1 A B 96 56.000 156.399 23.621 1.00 51.17 N
ATOM 21 C2 A B 96 56.353 157.467 22.898 1.00 50.76 C
ATOM 22 N3 A B 96 56.864 157.523 21.671 1.00 50.63 N
ATOM 23 C4 A B 96 57.015 156.290 21.165 1.00 49.09 C
ATOM 24 P U B 97 62.800 156.451 19.135 1.00 49.64 P
ATOM 25 OP1 U B 97 64.039 157.001 18.533 1.00 50.88 O
ATOM 26 OP2 U B 97 62.690 154.990 19.361 1.00 50.25 O
ATOM 27 O5' U B 97 62.519 157.199 20.515 1.00 48.89 O
TER
ATOM 2 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 3 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 4 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 5 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
ATOM 6 C5' U A 58 59.259 166.169 26.238 1.00 42.40 C
ATOM 7 C4' U A 58 57.930 165.514 25.945 1.00 43.79 C
ATOM 8 O4' U A 58 57.932 164.993 24.587 1.00 45.04 O
ATOM 9 C3' U A 58 57.540 164.339 26.835 1.00 44.31 C
ATOM 10 O3' U A 58 56.112 164.317 26.926 1.00 44.23 O
ATOM 11 C2' U A 58 58.014 163.150 26.010 1.00 44.37 C
ATOM 12 O2' U A 58 57.368 161.946 26.350 1.00 46.54 O
ATOM 13 C1' U A 58 57.618 163.617 24.613 1.00 44.63 C
ATOM 14 N1 U A 58 58.278 162.957 23.478 1.00 44.45 N
ATOM 15 C2 U A 58 57.521 162.068 22.726 1.00 44.56 C
ATOM 16 O2 U A 58 56.358 161.794 22.986 1.00 44.84 O
ATOM 17 N3 U A 58 58.178 161.502 21.662 1.00 44.48 N
ATOM 18 C4 U A 58 59.490 161.715 21.287 1.00 45.38 C
ATOM 19 O4 U A 58 59.952 161.098 20.327 1.00 44.26 O
ATOM 20 C5 U A 58 60.208 162.637 22.117 1.00 45.25 C
ATOM 21 C6 U A 58 59.593 163.212 23.158 1.00 45.10 C
ATOM 22 P A A 59 55.385 164.672 28.316 1.00 45.73 P
ATOM 23 OP1 A A 59 54.084 165.315 28.020 1.00 48.14 O
ATOM 24 OP2 A A 59 56.365 165.383 29.187 1.00 46.77 O
ATOM 25 O5' A A 59 55.052 163.239 28.931 1.00 45.79 O
TER
ATOM 1 O3' G B 95 59.286 151.867 15.773 1.00 54.52 O
ATOM 2 P A B 96 60.322 152.388 16.886 1.00 54.71 P
ATOM 3 OP1 A B 96 61.605 152.638 16.181 1.00 55.53 O
ATOM 4 OP2 A B 96 60.291 151.461 18.049 1.00 55.05 O
ATOM 5 O5' A B 96 59.730 153.792 17.350 1.00 50.75 O
ATOM 6 C5' A B 96 59.760 154.919 16.469 1.00 48.78 C
ATOM 7 C4' A B 96 59.464 156.187 17.226 1.00 48.84 C
ATOM 8 O4' A B 96 58.086 156.195 17.679 1.00 49.32 O
ATOM 9 C3' A B 96 60.267 156.403 18.495 1.00 47.65 C
ATOM 10 O3' A B 96 61.566 156.900 18.215 1.00 48.76 O
ATOM 11 C2' A B 96 59.402 157.405 19.243 1.00 46.04 C
ATOM 12 O2' A B 96 59.530 158.709 18.733 1.00 42.92 O
ATOM 13 C1' A B 96 58.001 156.886 18.918 1.00 47.92 C
ATOM 14 N9 A B 96 57.518 155.952 19.934 1.00 48.82 N
ATOM 15 C8 A B 96 57.477 154.581 19.875 1.00 49.06 C
ATOM 16 N7 A B 96 56.996 154.021 20.956 1.00 50.40 N
ATOM 17 C5 A B 96 56.701 155.096 21.784 1.00 50.08 C
ATOM 18 C6 A B 96 56.164 155.173 23.083 1.00 49.96 C
ATOM 19 N6 A B 96 55.810 154.111 23.806 1.00 48.68 N
ATOM 20 N1 A B 96 56.000 156.399 23.621 1.00 51.17 N
ATOM 21 C2 A B 96 56.353 157.467 22.898 1.00 50.76 C
ATOM 22 N3 A B 96 56.864 157.523 21.671 1.00 50.63 N
ATOM 23 C4 A B 96 57.015 156.290 21.165 1.00 49.09 C
ATOM 24 P U B 97 62.800 156.451 19.135 1.00 49.64 P
ATOM 25 OP1 U B 97 64.039 157.001 18.533 1.00 50.88 O
ATOM 26 OP2 U B 97 62.690 154.990 19.361 1.00 50.25 O
ATOM 27 O5' U B 97 62.519 157.199 20.515 1.00 48.89 O
TER
Atoms:
C4: (59.490,161.715,21.287)
N3: (58.178,161.502,21.662)
OP1: (62.778,164.670,25.834)
OP2: (61.961,167.083,26.126)
C2: (57.521,162.068,22.726)
C1': (57.618,163.617,24.613)
C3': (57.540,164.339,26.835)
O5': (60.332,165.221,26.100)
O4': (57.932,164.993,24.587)
C5': (59.259,166.169,26.238)
P: (61.831,165.639,26.445)
C4': (57.930,165.514,25.945)
C2': (58.014,163.150,26.010)
O2': (57.368,161.946,26.350)
N1: (58.278,162.957,23.478)
O4: (59.952,161.098,20.327)
O2: (56.358,161.794,22.986)
C6: (59.593,163.212,23.158)
C5: (60.208,162.637,22.117)
O3': (56.112,164.317,26.926)
N3: (58.178,161.502,21.662)
OP1: (62.778,164.670,25.834)
OP2: (61.961,167.083,26.126)
C2: (57.521,162.068,22.726)
C1': (57.618,163.617,24.613)
C3': (57.540,164.339,26.835)
O5': (60.332,165.221,26.100)
O4': (57.932,164.993,24.587)
C5': (59.259,166.169,26.238)
P: (61.831,165.639,26.445)
C4': (57.930,165.514,25.945)
C2': (58.014,163.150,26.010)
O2': (57.368,161.946,26.350)
N1: (58.278,162.957,23.478)
O4: (59.952,161.098,20.327)
O2: (56.358,161.794,22.986)
C6: (59.593,163.212,23.158)
C5: (60.208,162.637,22.117)
O3': (56.112,164.317,26.926)
OP1: (61.605,152.638,16.181)
OP2: (60.291,151.461,18.049)
C3': (60.267,156.403,18.495)
C1': (58.001,156.886,18.918)
C5': (59.760,154.919,16.469)
O4': (58.086,156.195,17.679)
C8: (57.477,154.581,19.875)
O2': (59.530,158.709,18.733)
C6: (56.164,155.173,23.083)
C5: (56.701,155.096,21.784)
C4: (57.015,156.290,21.165)
P: (60.322,152.388,16.886)
C4': (59.464,156.187,17.226)
C2': (59.402,157.405,19.243)
C2: (56.353,157.467,22.898)
N1: (56.000,156.399,23.621)
N3: (56.864,157.523,21.671)
N6: (55.810,154.111,23.806)
N7: (56.996,154.021,20.956)
N9: (57.518,155.952,19.934)
O5': (59.730,153.792,17.350)
O3': (61.566,156.900,18.215)
OP2: (60.291,151.461,18.049)
C3': (60.267,156.403,18.495)
C1': (58.001,156.886,18.918)
C5': (59.760,154.919,16.469)
O4': (58.086,156.195,17.679)
C8: (57.477,154.581,19.875)
O2': (59.530,158.709,18.733)
C6: (56.164,155.173,23.083)
C5: (56.701,155.096,21.784)
C4: (57.015,156.290,21.165)
P: (60.322,152.388,16.886)
C4': (59.464,156.187,17.226)
C2': (59.402,157.405,19.243)
C2: (56.353,157.467,22.898)
N1: (56.000,156.399,23.621)
N3: (56.864,157.523,21.671)
N6: (55.810,154.111,23.806)
N7: (56.996,154.021,20.956)
N9: (57.518,155.952,19.934)
O5': (59.730,153.792,17.350)
O3': (61.566,156.900,18.215)
Image (generated by PyMOL):