ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01332:01390

Extra

PDB:
ATOM 1 O3' A A1331 55.100 152.255 95.230 1.00 36.33 O
ATOM 2 P G A1332 55.728 153.732 95.250 1.00 39.43 P
ATOM 3 OP1 G A1332 57.024 153.700 95.973 1.00 39.72 O
ATOM 4 OP2 G A1332 54.663 154.652 95.710 1.00 39.27 O
ATOM 5 O5' G A1332 56.034 154.041 93.719 1.00 36.44 O
ATOM 6 C5' G A1332 57.224 153.550 93.108 1.00 31.99 C
ATOM 7 C4' G A1332 57.324 154.054 91.704 1.00 31.30 C
ATOM 8 O4' G A1332 56.168 153.593 90.972 1.00 31.34 O
ATOM 9 C3' G A1332 57.267 155.557 91.524 1.00 32.71 C
ATOM 10 O3' G A1332 58.512 156.193 91.779 1.00 35.68 O
ATOM 11 C2' G A1332 56.858 155.664 90.067 1.00 32.93 C
ATOM 12 O2' G A1332 57.917 155.383 89.181 1.00 33.04 O
ATOM 13 C1' G A1332 55.825 154.544 89.981 1.00 32.43 C
ATOM 14 N9 G A1332 54.484 155.040 90.264 1.00 32.16 N
ATOM 15 C8 G A1332 53.680 154.708 91.323 1.00 32.05 C
ATOM 16 N7 G A1332 52.548 155.353 91.326 1.00 32.99 N
ATOM 17 C5 G A1332 52.605 156.153 90.196 1.00 32.16 C
ATOM 18 C6 G A1332 51.679 157.091 89.698 1.00 33.50 C
ATOM 19 O6 G A1332 50.579 157.406 90.164 1.00 35.95 O
ATOM 20 N1 G A1332 52.143 157.703 88.539 1.00 33.41 N
ATOM 21 C2 G A1332 53.350 157.445 87.938 1.00 33.48 C
ATOM 22 N2 G A1332 53.630 158.161 86.834 1.00 32.43 N
ATOM 23 N3 G A1332 54.221 156.559 88.391 1.00 31.75 N
ATOM 24 C4 G A1332 53.787 155.961 89.521 1.00 31.88 C
ATOM 25 P C A1333 58.536 157.622 92.521 1.00 36.90 P
ATOM 26 OP1 C A1333 59.956 157.944 92.828 1.00 34.38 O
ATOM 27 OP2 C A1333 57.539 157.587 93.618 1.00 35.16 O
ATOM 28 O5' C A1333 58.014 158.631 91.404 1.00 36.26 O
TER

ATOM 1 O3' G B1389 57.550 164.186 78.735 1.00 41.80 O
ATOM 2 P C B1390 58.617 163.415 79.647 1.00 42.98 P
ATOM 3 OP1 C B1390 59.317 164.458 80.442 1.00 41.82 O
ATOM 4 OP2 C B1390 59.394 162.498 78.778 1.00 42.32 O
ATOM 5 O5' C B1390 57.740 162.524 80.627 1.00 40.98 O
ATOM 6 C5' C B1390 57.052 163.115 81.730 1.00 40.36 C
ATOM 7 C4' C B1390 55.963 162.200 82.209 1.00 39.26 C
ATOM 8 O4' C B1390 56.542 160.958 82.694 1.00 38.92 O
ATOM 9 C3' C B1390 55.125 162.754 83.352 1.00 40.24 C
ATOM 10 O3' C B1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 11 C2' C B1390 55.744 162.093 84.575 1.00 40.05 C
ATOM 12 O2' C B1390 54.856 161.966 85.667 1.00 41.00 O
ATOM 13 C1' C B1390 56.111 160.723 84.016 1.00 39.89 C
ATOM 14 N1 C B1390 57.191 160.061 84.766 1.00 40.86 N
ATOM 15 C2 C B1390 56.946 158.811 85.340 1.00 41.21 C
ATOM 16 O2 C B1390 55.846 158.276 85.174 1.00 40.94 O
ATOM 17 N3 C B1390 57.912 158.217 86.062 1.00 42.15 N
ATOM 18 C4 C B1390 59.091 158.817 86.220 1.00 43.52 C
ATOM 19 N4 C B1390 60.021 158.194 86.958 1.00 45.33 N
ATOM 20 C5 C B1390 59.374 160.081 85.633 1.00 42.87 C
ATOM 21 C6 C B1390 58.407 160.659 84.919 1.00 41.01 C
ATOM 22 P U B1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 23 OP1 U B1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 24 OP2 U B1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 25 O5' U B1391 51.913 163.969 83.412 1.00 41.93 O
TER

Atoms:
OP1: (57.024,153.700,95.973)
OP2: (54.663,154.652,95.710)
C3': (57.267,155.557,91.524)
C1': (55.825,154.544,89.981)
C5': (57.224,153.550,93.108)
O6: (50.579,157.406,90.164)
O4': (56.168,153.593,90.972)
C8: (53.680,154.708,91.323)
C2: (53.350,157.445,87.938)
C6: (51.679,157.091,89.698)
C5: (52.605,156.153,90.196)
C4: (53.787,155.961,89.521)
P: (55.728,153.732,95.250)
C4': (57.324,154.054,91.704)
C2': (56.858,155.664,90.067)
O2': (57.917,155.383,89.181)
N1: (52.143,157.703,88.539)
N2: (53.630,158.161,86.834)
N3: (54.221,156.559,88.391)
N7: (52.548,155.353,91.326)
N9: (54.484,155.040,90.264)
O5': (56.034,154.041,93.719)
O3': (58.512,156.193,91.779)
C2: (56.946,158.811,85.340)
OP1: (59.317,164.458,80.442)
OP2: (59.394,162.498,78.778)
C4: (59.091,158.817,86.220)
O5': (57.740,162.524,80.627)
C3': (55.125,162.754,83.352)
C1': (56.111,160.723,84.016)
O4': (56.542,160.958,82.694)
C5': (57.052,163.115,81.730)
P: (58.617,163.415,79.647)
O2: (55.846,158.276,85.174)
C4': (55.963,162.200,82.209)
C2': (55.744,162.093,84.575)
O2': (54.856,161.966,85.667)
N1: (57.191,160.061,84.766)
N3: (57.912,158.217,86.062)
N4: (60.021,158.194,86.958)
C6: (58.407,160.659,84.919)
C5: (59.374,160.081,85.633)
O3': (53.791,162.318,83.172)
Image (generated by PyMOL):
PyMOL image
show in jmol