Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.683 98.539 111.631 1.00 40.03 O
ATOM 2 P C A1086 47.158 98.555 110.991 1.00 41.98 P
ATOM 3 OP1 C A1086 47.104 99.387 109.767 1.00 43.25 O
ATOM 4 OP2 C A1086 47.661 97.152 110.904 1.00 39.66 O
ATOM 5 O5' C A1086 48.017 99.361 112.061 1.00 39.90 O
ATOM 6 C5' C A1086 49.392 99.036 112.322 1.00 37.04 C
ATOM 7 C4' C A1086 50.151 100.288 112.670 1.00 36.91 C
ATOM 8 O4' C A1086 50.326 101.081 111.473 1.00 35.98 O
ATOM 9 C3' C A1086 49.449 101.212 113.655 1.00 37.56 C
ATOM 10 O3' C A1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 11 C2' C A1086 50.051 102.568 113.320 1.00 36.63 C
ATOM 12 O2' C A1086 51.298 102.760 113.952 1.00 40.89 O
ATOM 13 C1' C A1086 50.253 102.456 111.803 1.00 36.37 C
ATOM 14 N1 C A1086 49.201 103.087 110.980 1.00 34.85 N
ATOM 15 C2 C A1086 48.993 104.465 111.096 1.00 34.03 C
ATOM 16 O2 C A1086 49.722 105.123 111.857 1.00 38.18 O
ATOM 17 N3 C A1086 48.015 105.050 110.369 1.00 32.00 N
ATOM 18 C4 C A1086 47.280 104.322 109.534 1.00 30.14 C
ATOM 19 N4 C A1086 46.338 104.948 108.839 1.00 28.80 N
ATOM 20 C5 C A1086 47.482 102.920 109.377 1.00 31.76 C
ATOM 21 C6 C A1086 48.439 102.347 110.116 1.00 32.88 C
ATOM 22 P U A1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 23 OP1 U A1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 24 OP2 U A1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 25 O5' U A1087 47.584 101.819 115.888 1.00 35.74 O
TER
ATOM 1 O3' U B2015 42.340 107.991 109.963 1.00 26.64 O
ATOM 2 P G B2016 43.538 107.246 109.184 1.00 28.12 P
ATOM 3 OP1 G B2016 43.132 105.824 109.017 1.00 28.34 O
ATOM 4 OP2 G B2016 44.834 107.551 109.848 1.00 27.21 O
ATOM 5 O5' G B2016 43.554 107.947 107.749 1.00 28.00 O
ATOM 6 C5' G B2016 42.467 107.795 106.824 1.00 25.50 C
ATOM 7 C4' G B2016 42.607 108.786 105.686 1.00 25.59 C
ATOM 8 O4' G B2016 42.531 110.139 106.205 1.00 26.72 O
ATOM 9 C3' G B2016 43.931 108.748 104.944 1.00 26.25 C
ATOM 10 O3' G B2016 43.919 107.711 103.969 1.00 26.75 O
ATOM 11 C2' G B2016 44.009 110.149 104.340 1.00 25.46 C
ATOM 12 O2' G B2016 43.236 110.328 103.178 1.00 25.85 O
ATOM 13 C1' G B2016 43.377 110.993 105.448 1.00 26.01 C
ATOM 14 N9 G B2016 44.371 111.590 106.338 1.00 26.99 N
ATOM 15 C8 G B2016 44.928 111.028 107.463 1.00 25.67 C
ATOM 16 N7 G B2016 45.828 111.788 108.023 1.00 25.95 N
ATOM 17 C5 G B2016 45.865 112.924 107.227 1.00 25.71 C
ATOM 18 C6 G B2016 46.667 114.094 107.327 1.00 26.03 C
ATOM 19 O6 G B2016 47.545 114.355 108.157 1.00 28.53 O
ATOM 20 N1 G B2016 46.369 115.006 106.320 1.00 23.02 N
ATOM 21 C2 G B2016 45.431 114.812 105.335 1.00 23.47 C
ATOM 22 N2 G B2016 45.281 115.806 104.452 1.00 23.09 N
ATOM 23 N3 G B2016 44.692 113.723 105.223 1.00 23.44 N
ATOM 24 C4 G B2016 44.958 112.827 106.194 1.00 24.85 C
ATOM 25 P C B2017 45.187 106.735 103.812 1.00 29.06 P
ATOM 26 OP1 C B2017 44.758 105.636 102.914 1.00 25.75 O
ATOM 27 OP2 C B2017 45.746 106.396 105.158 1.00 31.63 O
ATOM 28 O5' C B2017 46.263 107.638 103.056 1.00 29.49 O
TER
ATOM 2 P C A1086 47.158 98.555 110.991 1.00 41.98 P
ATOM 3 OP1 C A1086 47.104 99.387 109.767 1.00 43.25 O
ATOM 4 OP2 C A1086 47.661 97.152 110.904 1.00 39.66 O
ATOM 5 O5' C A1086 48.017 99.361 112.061 1.00 39.90 O
ATOM 6 C5' C A1086 49.392 99.036 112.322 1.00 37.04 C
ATOM 7 C4' C A1086 50.151 100.288 112.670 1.00 36.91 C
ATOM 8 O4' C A1086 50.326 101.081 111.473 1.00 35.98 O
ATOM 9 C3' C A1086 49.449 101.212 113.655 1.00 37.56 C
ATOM 10 O3' C A1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 11 C2' C A1086 50.051 102.568 113.320 1.00 36.63 C
ATOM 12 O2' C A1086 51.298 102.760 113.952 1.00 40.89 O
ATOM 13 C1' C A1086 50.253 102.456 111.803 1.00 36.37 C
ATOM 14 N1 C A1086 49.201 103.087 110.980 1.00 34.85 N
ATOM 15 C2 C A1086 48.993 104.465 111.096 1.00 34.03 C
ATOM 16 O2 C A1086 49.722 105.123 111.857 1.00 38.18 O
ATOM 17 N3 C A1086 48.015 105.050 110.369 1.00 32.00 N
ATOM 18 C4 C A1086 47.280 104.322 109.534 1.00 30.14 C
ATOM 19 N4 C A1086 46.338 104.948 108.839 1.00 28.80 N
ATOM 20 C5 C A1086 47.482 102.920 109.377 1.00 31.76 C
ATOM 21 C6 C A1086 48.439 102.347 110.116 1.00 32.88 C
ATOM 22 P U A1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 23 OP1 U A1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 24 OP2 U A1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 25 O5' U A1087 47.584 101.819 115.888 1.00 35.74 O
TER
ATOM 1 O3' U B2015 42.340 107.991 109.963 1.00 26.64 O
ATOM 2 P G B2016 43.538 107.246 109.184 1.00 28.12 P
ATOM 3 OP1 G B2016 43.132 105.824 109.017 1.00 28.34 O
ATOM 4 OP2 G B2016 44.834 107.551 109.848 1.00 27.21 O
ATOM 5 O5' G B2016 43.554 107.947 107.749 1.00 28.00 O
ATOM 6 C5' G B2016 42.467 107.795 106.824 1.00 25.50 C
ATOM 7 C4' G B2016 42.607 108.786 105.686 1.00 25.59 C
ATOM 8 O4' G B2016 42.531 110.139 106.205 1.00 26.72 O
ATOM 9 C3' G B2016 43.931 108.748 104.944 1.00 26.25 C
ATOM 10 O3' G B2016 43.919 107.711 103.969 1.00 26.75 O
ATOM 11 C2' G B2016 44.009 110.149 104.340 1.00 25.46 C
ATOM 12 O2' G B2016 43.236 110.328 103.178 1.00 25.85 O
ATOM 13 C1' G B2016 43.377 110.993 105.448 1.00 26.01 C
ATOM 14 N9 G B2016 44.371 111.590 106.338 1.00 26.99 N
ATOM 15 C8 G B2016 44.928 111.028 107.463 1.00 25.67 C
ATOM 16 N7 G B2016 45.828 111.788 108.023 1.00 25.95 N
ATOM 17 C5 G B2016 45.865 112.924 107.227 1.00 25.71 C
ATOM 18 C6 G B2016 46.667 114.094 107.327 1.00 26.03 C
ATOM 19 O6 G B2016 47.545 114.355 108.157 1.00 28.53 O
ATOM 20 N1 G B2016 46.369 115.006 106.320 1.00 23.02 N
ATOM 21 C2 G B2016 45.431 114.812 105.335 1.00 23.47 C
ATOM 22 N2 G B2016 45.281 115.806 104.452 1.00 23.09 N
ATOM 23 N3 G B2016 44.692 113.723 105.223 1.00 23.44 N
ATOM 24 C4 G B2016 44.958 112.827 106.194 1.00 24.85 C
ATOM 25 P C B2017 45.187 106.735 103.812 1.00 29.06 P
ATOM 26 OP1 C B2017 44.758 105.636 102.914 1.00 25.75 O
ATOM 27 OP2 C B2017 45.746 106.396 105.158 1.00 31.63 O
ATOM 28 O5' C B2017 46.263 107.638 103.056 1.00 29.49 O
TER
Atoms:
C2: (48.993,104.465,111.096)
OP1: (47.104,99.387,109.767)
OP2: (47.661,97.152,110.904)
C4: (47.280,104.322,109.534)
O5': (48.017,99.361,112.061)
C3': (49.449,101.212,113.655)
C1': (50.253,102.456,111.803)
O4': (50.326,101.081,111.473)
C5': (49.392,99.036,112.322)
P: (47.158,98.555,110.991)
O2: (49.722,105.123,111.857)
C4': (50.151,100.288,112.670)
C2': (50.051,102.568,113.320)
O2': (51.298,102.760,113.952)
N1: (49.201,103.087,110.980)
N3: (48.015,105.050,110.369)
N4: (46.338,104.948,108.839)
C6: (48.439,102.347,110.116)
C5: (47.482,102.920,109.377)
O3': (49.742,100.843,115.006)
OP1: (47.104,99.387,109.767)
OP2: (47.661,97.152,110.904)
C4: (47.280,104.322,109.534)
O5': (48.017,99.361,112.061)
C3': (49.449,101.212,113.655)
C1': (50.253,102.456,111.803)
O4': (50.326,101.081,111.473)
C5': (49.392,99.036,112.322)
P: (47.158,98.555,110.991)
O2: (49.722,105.123,111.857)
C4': (50.151,100.288,112.670)
C2': (50.051,102.568,113.320)
O2': (51.298,102.760,113.952)
N1: (49.201,103.087,110.980)
N3: (48.015,105.050,110.369)
N4: (46.338,104.948,108.839)
C6: (48.439,102.347,110.116)
C5: (47.482,102.920,109.377)
O3': (49.742,100.843,115.006)
OP1: (43.132,105.824,109.017)
OP2: (44.834,107.551,109.848)
C3': (43.931,108.748,104.944)
C1': (43.377,110.993,105.448)
C5': (42.467,107.795,106.824)
O6: (47.545,114.355,108.157)
O4': (42.531,110.139,106.205)
C8: (44.928,111.028,107.463)
C2: (45.431,114.812,105.335)
C6: (46.667,114.094,107.327)
C5: (45.865,112.924,107.227)
C4: (44.958,112.827,106.194)
P: (43.538,107.246,109.184)
C4': (42.607,108.786,105.686)
C2': (44.009,110.149,104.340)
O2': (43.236,110.328,103.178)
N1: (46.369,115.006,106.320)
N2: (45.281,115.806,104.452)
N3: (44.692,113.723,105.223)
N7: (45.828,111.788,108.023)
N9: (44.371,111.590,106.338)
O5': (43.554,107.947,107.749)
O3': (43.919,107.711,103.969)
OP2: (44.834,107.551,109.848)
C3': (43.931,108.748,104.944)
C1': (43.377,110.993,105.448)
C5': (42.467,107.795,106.824)
O6: (47.545,114.355,108.157)
O4': (42.531,110.139,106.205)
C8: (44.928,111.028,107.463)
C2: (45.431,114.812,105.335)
C6: (46.667,114.094,107.327)
C5: (45.865,112.924,107.227)
C4: (44.958,112.827,106.194)
P: (43.538,107.246,109.184)
C4': (42.607,108.786,105.686)
C2': (44.009,110.149,104.340)
O2': (43.236,110.328,103.178)
N1: (46.369,115.006,106.320)
N2: (45.281,115.806,104.452)
N3: (44.692,113.723,105.223)
N7: (45.828,111.788,108.023)
N9: (44.371,111.590,106.338)
O5': (43.554,107.947,107.749)
O3': (43.919,107.711,103.969)
Image (generated by PyMOL):