Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.638 99.180 111.721 1.00 46.18 O
ATOM 2 P C A1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C A1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C A1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C A1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C A1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C A1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C A1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C A1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C A1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C A1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C A1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C A1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C A1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C A1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C A1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C A1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C A1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C A1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C A1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
TER
ATOM 1 O3' U B2015 42.398 108.563 109.878 1.00 34.26 O
ATOM 2 P G B2016 43.616 107.870 109.084 1.00 34.34 P
ATOM 3 OP1 G B2016 43.265 106.433 108.961 1.00 35.95 O
ATOM 4 OP2 G B2016 44.899 108.257 109.720 1.00 35.36 O
ATOM 5 O5' G B2016 43.588 108.540 107.638 1.00 33.04 O
ATOM 6 C5' G B2016 42.476 108.363 106.740 1.00 29.79 C
ATOM 7 C4' G B2016 42.577 109.353 105.604 1.00 31.97 C
ATOM 8 O4' G B2016 42.534 110.706 106.142 1.00 33.28 O
ATOM 9 C3' G B2016 43.891 109.303 104.843 1.00 31.14 C
ATOM 10 O3' G B2016 43.882 108.270 103.867 1.00 31.29 O
ATOM 11 C2' G B2016 43.997 110.707 104.261 1.00 31.33 C
ATOM 12 O2' G B2016 43.216 110.922 103.111 1.00 32.02 O
ATOM 13 C1' G B2016 43.398 111.546 105.390 1.00 33.34 C
ATOM 14 N9 G B2016 44.407 112.126 106.277 1.00 34.48 N
ATOM 15 C8 G B2016 44.983 111.550 107.385 1.00 34.84 C
ATOM 16 N7 G B2016 45.875 112.318 107.956 1.00 34.85 N
ATOM 17 C5 G B2016 45.889 113.469 107.180 1.00 34.35 C
ATOM 18 C6 G B2016 46.671 114.642 107.296 1.00 35.48 C
ATOM 19 O6 G B2016 47.555 114.902 108.125 1.00 38.05 O
ATOM 20 N1 G B2016 46.353 115.566 106.305 1.00 34.61 N
ATOM 21 C2 G B2016 45.414 115.380 105.322 1.00 32.95 C
ATOM 22 N2 G B2016 45.239 116.392 104.464 1.00 32.36 N
ATOM 23 N3 G B2016 44.698 114.285 105.191 1.00 32.40 N
ATOM 24 C4 G B2016 44.982 113.375 106.147 1.00 34.24 C
ATOM 25 P C B2017 45.154 107.290 103.722 1.00 33.52 P
ATOM 26 OP1 C B2017 44.744 106.210 102.804 1.00 31.36 O
ATOM 27 OP2 C B2017 45.680 106.935 105.077 1.00 33.15 O
ATOM 28 O5' C B2017 46.244 108.195 102.988 1.00 32.46 O
TER
ATOM 2 P C A1086 47.084 99.153 111.021 1.00 47.88 P
ATOM 3 OP1 C A1086 46.990 99.937 109.763 1.00 48.07 O
ATOM 4 OP2 C A1086 47.559 97.743 110.975 1.00 45.61 O
ATOM 5 O5' C A1086 47.986 99.986 112.032 1.00 46.00 O
ATOM 6 C5' C A1086 49.356 99.653 112.269 1.00 42.50 C
ATOM 7 C4' C A1086 50.107 100.893 112.669 1.00 42.95 C
ATOM 8 O4' C A1086 50.280 101.735 111.506 1.00 41.20 O
ATOM 9 C3' C A1086 49.401 101.770 113.696 1.00 41.57 C
ATOM 10 O3' C A1086 49.723 101.350 115.027 1.00 42.51 O
ATOM 11 C2' C A1086 49.984 103.149 113.411 1.00 40.72 C
ATOM 12 O2' C A1086 51.210 103.359 114.074 1.00 41.95 O
ATOM 13 C1' C A1086 50.208 103.094 111.892 1.00 40.46 C
ATOM 14 N1 C A1086 49.168 103.754 111.076 1.00 40.59 N
ATOM 15 C2 C A1086 48.972 105.137 111.209 1.00 39.53 C
ATOM 16 O2 C A1086 49.687 105.775 111.995 1.00 39.51 O
ATOM 17 N3 C A1086 48.014 105.740 110.472 1.00 37.98 N
ATOM 18 C4 C A1086 47.284 105.025 109.617 1.00 36.54 C
ATOM 19 N4 C A1086 46.369 105.664 108.898 1.00 38.51 N
ATOM 20 C5 C A1086 47.465 103.624 109.458 1.00 36.80 C
ATOM 21 C6 C A1086 48.403 103.033 110.200 1.00 37.47 C
ATOM 22 P U A1087 48.555 101.024 116.086 1.00 44.28 P
ATOM 23 OP1 U A1087 49.169 101.027 117.433 1.00 42.65 O
ATOM 24 OP2 U A1087 47.823 99.810 115.613 1.00 41.83 O
ATOM 25 O5' U A1087 47.587 102.282 116.000 1.00 41.41 O
TER
ATOM 1 O3' U B2015 42.398 108.563 109.878 1.00 34.26 O
ATOM 2 P G B2016 43.616 107.870 109.084 1.00 34.34 P
ATOM 3 OP1 G B2016 43.265 106.433 108.961 1.00 35.95 O
ATOM 4 OP2 G B2016 44.899 108.257 109.720 1.00 35.36 O
ATOM 5 O5' G B2016 43.588 108.540 107.638 1.00 33.04 O
ATOM 6 C5' G B2016 42.476 108.363 106.740 1.00 29.79 C
ATOM 7 C4' G B2016 42.577 109.353 105.604 1.00 31.97 C
ATOM 8 O4' G B2016 42.534 110.706 106.142 1.00 33.28 O
ATOM 9 C3' G B2016 43.891 109.303 104.843 1.00 31.14 C
ATOM 10 O3' G B2016 43.882 108.270 103.867 1.00 31.29 O
ATOM 11 C2' G B2016 43.997 110.707 104.261 1.00 31.33 C
ATOM 12 O2' G B2016 43.216 110.922 103.111 1.00 32.02 O
ATOM 13 C1' G B2016 43.398 111.546 105.390 1.00 33.34 C
ATOM 14 N9 G B2016 44.407 112.126 106.277 1.00 34.48 N
ATOM 15 C8 G B2016 44.983 111.550 107.385 1.00 34.84 C
ATOM 16 N7 G B2016 45.875 112.318 107.956 1.00 34.85 N
ATOM 17 C5 G B2016 45.889 113.469 107.180 1.00 34.35 C
ATOM 18 C6 G B2016 46.671 114.642 107.296 1.00 35.48 C
ATOM 19 O6 G B2016 47.555 114.902 108.125 1.00 38.05 O
ATOM 20 N1 G B2016 46.353 115.566 106.305 1.00 34.61 N
ATOM 21 C2 G B2016 45.414 115.380 105.322 1.00 32.95 C
ATOM 22 N2 G B2016 45.239 116.392 104.464 1.00 32.36 N
ATOM 23 N3 G B2016 44.698 114.285 105.191 1.00 32.40 N
ATOM 24 C4 G B2016 44.982 113.375 106.147 1.00 34.24 C
ATOM 25 P C B2017 45.154 107.290 103.722 1.00 33.52 P
ATOM 26 OP1 C B2017 44.744 106.210 102.804 1.00 31.36 O
ATOM 27 OP2 C B2017 45.680 106.935 105.077 1.00 33.15 O
ATOM 28 O5' C B2017 46.244 108.195 102.988 1.00 32.46 O
TER
Atoms:
C2: (48.972,105.137,111.209)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
OP1: (46.990,99.937,109.763)
OP2: (47.559,97.743,110.975)
C4: (47.284,105.025,109.617)
O5': (47.986,99.986,112.032)
C3': (49.401,101.770,113.696)
C1': (50.208,103.094,111.892)
O4': (50.280,101.735,111.506)
C5': (49.356,99.653,112.269)
P: (47.084,99.153,111.021)
O2: (49.687,105.775,111.995)
C4': (50.107,100.893,112.669)
C2': (49.984,103.149,113.411)
O2': (51.210,103.359,114.074)
N1: (49.168,103.754,111.076)
N3: (48.014,105.740,110.472)
N4: (46.369,105.664,108.898)
C6: (48.403,103.033,110.200)
C5: (47.465,103.624,109.458)
O3': (49.723,101.350,115.027)
OP1: (43.265,106.433,108.961)
OP2: (44.899,108.257,109.720)
C3': (43.891,109.303,104.843)
C1': (43.398,111.546,105.390)
C5': (42.476,108.363,106.740)
O6: (47.555,114.902,108.125)
O4': (42.534,110.706,106.142)
C8: (44.983,111.550,107.385)
C2: (45.414,115.380,105.322)
C6: (46.671,114.642,107.296)
C5: (45.889,113.469,107.180)
C4: (44.982,113.375,106.147)
P: (43.616,107.870,109.084)
C4': (42.577,109.353,105.604)
C2': (43.997,110.707,104.261)
O2': (43.216,110.922,103.111)
N1: (46.353,115.566,106.305)
N2: (45.239,116.392,104.464)
N3: (44.698,114.285,105.191)
N7: (45.875,112.318,107.956)
N9: (44.407,112.126,106.277)
O5': (43.588,108.540,107.638)
O3': (43.882,108.270,103.867)
OP2: (44.899,108.257,109.720)
C3': (43.891,109.303,104.843)
C1': (43.398,111.546,105.390)
C5': (42.476,108.363,106.740)
O6: (47.555,114.902,108.125)
O4': (42.534,110.706,106.142)
C8: (44.983,111.550,107.385)
C2: (45.414,115.380,105.322)
C6: (46.671,114.642,107.296)
C5: (45.889,113.469,107.180)
C4: (44.982,113.375,106.147)
P: (43.616,107.870,109.084)
C4': (42.577,109.353,105.604)
C2': (43.997,110.707,104.261)
O2': (43.216,110.922,103.111)
N1: (46.353,115.566,106.305)
N2: (45.239,116.392,104.464)
N3: (44.698,114.285,105.191)
N7: (45.875,112.318,107.956)
N9: (44.407,112.126,106.277)
O5': (43.588,108.540,107.638)
O3': (43.882,108.270,103.867)
Image (generated by PyMOL):