Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 2 P C A1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 3 OP1 C A1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 4 OP2 C A1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 5 O5' C A1086 47.999 99.882 112.104 1.00 43.27 O
ATOM 6 C5' C A1086 49.388 99.600 112.291 1.00 40.76 C
ATOM 7 C4' C A1086 50.117 100.867 112.644 1.00 40.58 C
ATOM 8 O4' C A1086 50.246 101.688 111.460 1.00 38.47 O
ATOM 9 C3' C A1086 49.418 101.762 113.657 1.00 40.03 C
ATOM 10 O3' C A1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 11 C2' C A1086 50.016 103.128 113.352 1.00 38.79 C
ATOM 12 O2' C A1086 51.262 103.326 113.985 1.00 37.93 O
ATOM 13 C1' C A1086 50.199 103.055 111.830 1.00 38.19 C
ATOM 14 N1 C A1086 49.143 103.721 111.043 1.00 37.69 N
ATOM 15 C2 C A1086 48.967 105.104 111.176 1.00 36.93 C
ATOM 16 O2 C A1086 49.689 105.732 111.966 1.00 39.13 O
ATOM 17 N3 C A1086 48.019 105.721 110.444 1.00 35.89 N
ATOM 18 C4 C A1086 47.262 105.019 109.607 1.00 35.04 C
ATOM 19 N4 C A1086 46.349 105.678 108.901 1.00 36.85 N
ATOM 20 C5 C A1086 47.410 103.611 109.455 1.00 35.76 C
ATOM 21 C6 C A1086 48.350 103.007 110.186 1.00 36.81 C
ATOM 22 P U A1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 23 OP1 U A1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 24 OP2 U A1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 25 O5' U A1087 47.552 102.388 115.871 1.00 40.88 O
TER
ATOM 1 O3' U B2015 42.481 108.553 109.920 1.00 29.84 O
ATOM 2 P G B2016 43.650 107.890 109.048 1.00 30.98 P
ATOM 3 OP1 G B2016 43.249 106.477 108.837 1.00 31.21 O
ATOM 4 OP2 G B2016 44.963 108.197 109.679 1.00 29.28 O
ATOM 5 O5' G B2016 43.581 108.649 107.651 1.00 28.61 O
ATOM 6 C5' G B2016 42.529 108.404 106.711 1.00 26.18 C
ATOM 7 C4' G B2016 42.652 109.364 105.554 1.00 26.62 C
ATOM 8 O4' G B2016 42.616 110.727 106.058 1.00 27.43 O
ATOM 9 C3' G B2016 43.972 109.277 104.816 1.00 26.54 C
ATOM 10 O3' G B2016 43.920 108.234 103.851 1.00 28.72 O
ATOM 11 C2' G B2016 44.098 110.662 104.199 1.00 26.21 C
ATOM 12 O2' G B2016 43.324 110.811 103.033 1.00 25.94 O
ATOM 13 C1' G B2016 43.493 111.542 105.296 1.00 29.05 C
ATOM 14 N9 G B2016 44.480 112.148 106.194 1.00 31.93 N
ATOM 15 C8 G B2016 45.038 111.582 107.314 1.00 32.54 C
ATOM 16 N7 G B2016 45.917 112.353 107.895 1.00 32.83 N
ATOM 17 C5 G B2016 45.941 113.500 107.116 1.00 32.50 C
ATOM 18 C6 G B2016 46.723 114.680 107.240 1.00 33.83 C
ATOM 19 O6 G B2016 47.597 114.950 108.083 1.00 34.66 O
ATOM 20 N1 G B2016 46.420 115.596 106.242 1.00 32.59 N
ATOM 21 C2 G B2016 45.498 115.404 105.247 1.00 31.58 C
ATOM 22 N2 G B2016 45.349 116.414 104.383 1.00 32.44 N
ATOM 23 N3 G B2016 44.777 114.308 105.110 1.00 31.21 N
ATOM 24 C4 G B2016 45.049 113.401 106.071 1.00 31.70 C
ATOM 25 P C B2017 45.187 107.260 103.650 1.00 31.33 P
ATOM 26 OP1 C B2017 44.800 106.246 102.645 1.00 29.42 O
ATOM 27 OP2 C B2017 45.674 106.810 104.986 1.00 30.91 O
ATOM 28 O5' C B2017 46.292 108.210 103.008 1.00 28.16 O
TER
ATOM 2 P C A1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 3 OP1 C A1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 4 OP2 C A1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 5 O5' C A1086 47.999 99.882 112.104 1.00 43.27 O
ATOM 6 C5' C A1086 49.388 99.600 112.291 1.00 40.76 C
ATOM 7 C4' C A1086 50.117 100.867 112.644 1.00 40.58 C
ATOM 8 O4' C A1086 50.246 101.688 111.460 1.00 38.47 O
ATOM 9 C3' C A1086 49.418 101.762 113.657 1.00 40.03 C
ATOM 10 O3' C A1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 11 C2' C A1086 50.016 103.128 113.352 1.00 38.79 C
ATOM 12 O2' C A1086 51.262 103.326 113.985 1.00 37.93 O
ATOM 13 C1' C A1086 50.199 103.055 111.830 1.00 38.19 C
ATOM 14 N1 C A1086 49.143 103.721 111.043 1.00 37.69 N
ATOM 15 C2 C A1086 48.967 105.104 111.176 1.00 36.93 C
ATOM 16 O2 C A1086 49.689 105.732 111.966 1.00 39.13 O
ATOM 17 N3 C A1086 48.019 105.721 110.444 1.00 35.89 N
ATOM 18 C4 C A1086 47.262 105.019 109.607 1.00 35.04 C
ATOM 19 N4 C A1086 46.349 105.678 108.901 1.00 36.85 N
ATOM 20 C5 C A1086 47.410 103.611 109.455 1.00 35.76 C
ATOM 21 C6 C A1086 48.350 103.007 110.186 1.00 36.81 C
ATOM 22 P U A1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 23 OP1 U A1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 24 OP2 U A1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 25 O5' U A1087 47.552 102.388 115.871 1.00 40.88 O
TER
ATOM 1 O3' U B2015 42.481 108.553 109.920 1.00 29.84 O
ATOM 2 P G B2016 43.650 107.890 109.048 1.00 30.98 P
ATOM 3 OP1 G B2016 43.249 106.477 108.837 1.00 31.21 O
ATOM 4 OP2 G B2016 44.963 108.197 109.679 1.00 29.28 O
ATOM 5 O5' G B2016 43.581 108.649 107.651 1.00 28.61 O
ATOM 6 C5' G B2016 42.529 108.404 106.711 1.00 26.18 C
ATOM 7 C4' G B2016 42.652 109.364 105.554 1.00 26.62 C
ATOM 8 O4' G B2016 42.616 110.727 106.058 1.00 27.43 O
ATOM 9 C3' G B2016 43.972 109.277 104.816 1.00 26.54 C
ATOM 10 O3' G B2016 43.920 108.234 103.851 1.00 28.72 O
ATOM 11 C2' G B2016 44.098 110.662 104.199 1.00 26.21 C
ATOM 12 O2' G B2016 43.324 110.811 103.033 1.00 25.94 O
ATOM 13 C1' G B2016 43.493 111.542 105.296 1.00 29.05 C
ATOM 14 N9 G B2016 44.480 112.148 106.194 1.00 31.93 N
ATOM 15 C8 G B2016 45.038 111.582 107.314 1.00 32.54 C
ATOM 16 N7 G B2016 45.917 112.353 107.895 1.00 32.83 N
ATOM 17 C5 G B2016 45.941 113.500 107.116 1.00 32.50 C
ATOM 18 C6 G B2016 46.723 114.680 107.240 1.00 33.83 C
ATOM 19 O6 G B2016 47.597 114.950 108.083 1.00 34.66 O
ATOM 20 N1 G B2016 46.420 115.596 106.242 1.00 32.59 N
ATOM 21 C2 G B2016 45.498 115.404 105.247 1.00 31.58 C
ATOM 22 N2 G B2016 45.349 116.414 104.383 1.00 32.44 N
ATOM 23 N3 G B2016 44.777 114.308 105.110 1.00 31.21 N
ATOM 24 C4 G B2016 45.049 113.401 106.071 1.00 31.70 C
ATOM 25 P C B2017 45.187 107.260 103.650 1.00 31.33 P
ATOM 26 OP1 C B2017 44.800 106.246 102.645 1.00 29.42 O
ATOM 27 OP2 C B2017 45.674 106.810 104.986 1.00 30.91 O
ATOM 28 O5' C B2017 46.292 108.210 103.008 1.00 28.16 O
TER
Atoms:
C2: (48.967,105.104,111.176)
OP1: (47.117,99.869,109.794)
OP2: (47.585,97.667,111.018)
C4: (47.262,105.019,109.607)
O5': (47.999,99.882,112.104)
C3': (49.418,101.762,113.657)
C1': (50.199,103.055,111.830)
O4': (50.246,101.688,111.460)
C5': (49.388,99.600,112.291)
P: (47.124,99.077,111.051)
O2: (49.689,105.732,111.966)
C4': (50.117,100.867,112.644)
C2': (50.016,103.128,113.352)
O2': (51.262,103.326,113.985)
N1: (49.143,103.721,111.043)
N3: (48.019,105.721,110.444)
N4: (46.349,105.678,108.901)
C6: (48.350,103.007,110.186)
C5: (47.410,103.611,109.455)
O3': (49.684,101.362,115.003)
OP1: (47.117,99.869,109.794)
OP2: (47.585,97.667,111.018)
C4: (47.262,105.019,109.607)
O5': (47.999,99.882,112.104)
C3': (49.418,101.762,113.657)
C1': (50.199,103.055,111.830)
O4': (50.246,101.688,111.460)
C5': (49.388,99.600,112.291)
P: (47.124,99.077,111.051)
O2: (49.689,105.732,111.966)
C4': (50.117,100.867,112.644)
C2': (50.016,103.128,113.352)
O2': (51.262,103.326,113.985)
N1: (49.143,103.721,111.043)
N3: (48.019,105.721,110.444)
N4: (46.349,105.678,108.901)
C6: (48.350,103.007,110.186)
C5: (47.410,103.611,109.455)
O3': (49.684,101.362,115.003)
OP1: (43.249,106.477,108.837)
OP2: (44.963,108.197,109.679)
C3': (43.972,109.277,104.816)
C1': (43.493,111.542,105.296)
C5': (42.529,108.404,106.711)
O6: (47.597,114.950,108.083)
O4': (42.616,110.727,106.058)
C8: (45.038,111.582,107.314)
C2: (45.498,115.404,105.247)
C6: (46.723,114.680,107.240)
C5: (45.941,113.500,107.116)
C4: (45.049,113.401,106.071)
P: (43.650,107.890,109.048)
C4': (42.652,109.364,105.554)
C2': (44.098,110.662,104.199)
O2': (43.324,110.811,103.033)
N1: (46.420,115.596,106.242)
N2: (45.349,116.414,104.383)
N3: (44.777,114.308,105.110)
N7: (45.917,112.353,107.895)
N9: (44.480,112.148,106.194)
O5': (43.581,108.649,107.651)
O3': (43.920,108.234,103.851)
OP2: (44.963,108.197,109.679)
C3': (43.972,109.277,104.816)
C1': (43.493,111.542,105.296)
C5': (42.529,108.404,106.711)
O6: (47.597,114.950,108.083)
O4': (42.616,110.727,106.058)
C8: (45.038,111.582,107.314)
C2: (45.498,115.404,105.247)
C6: (46.723,114.680,107.240)
C5: (45.941,113.500,107.116)
C4: (45.049,113.401,106.071)
P: (43.650,107.890,109.048)
C4': (42.652,109.364,105.554)
C2': (44.098,110.662,104.199)
O2': (43.324,110.811,103.033)
N1: (46.420,115.596,106.242)
N2: (45.349,116.414,104.383)
N3: (44.777,114.308,105.110)
N7: (45.917,112.353,107.895)
N9: (44.480,112.148,106.194)
O5': (43.581,108.649,107.651)
O3': (43.920,108.234,103.851)
Image (generated by PyMOL):