Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1185:1219
Extra
PDB:
ATOM 1 O3' A A 184 112.202 -4.287 112.958 1.00 60.75 O
ATOM 2 P U A 185 112.311 -2.734 112.610 1.00 62.11 P
ATOM 3 OP1 U A 185 113.439 -2.171 113.418 1.00 62.81 O
ATOM 4 OP2 U A 185 110.948 -2.145 112.756 1.00 61.71 O
ATOM 5 O5' U A 185 112.701 -2.790 111.072 1.00 61.71 O
ATOM 6 C5' U A 185 113.773 -3.616 110.630 1.00 61.92 C
ATOM 7 C4' U A 185 113.779 -3.730 109.141 1.00 61.42 C
ATOM 8 O4' U A 185 112.747 -4.640 108.731 1.00 60.90 O
ATOM 9 C3' U A 185 113.471 -2.450 108.394 1.00 61.10 C
ATOM 10 O3' U A 185 114.599 -1.639 108.248 1.00 61.47 O
ATOM 11 C2' U A 185 112.915 -2.952 107.078 1.00 60.46 C
ATOM 12 O2' U A 185 113.949 -3.328 106.192 1.00 60.54 O
ATOM 13 C1' U A 185 112.174 -4.205 107.527 1.00 60.32 C
ATOM 14 N1 U A 185 110.761 -3.917 107.775 1.00 59.92 N
ATOM 15 C2 U A 185 109.925 -4.292 106.752 1.00 59.31 C
ATOM 16 O2 U A 185 110.308 -4.857 105.757 1.00 59.12 O
ATOM 17 N3 U A 185 108.625 -4.017 106.956 1.00 58.94 N
ATOM 18 C4 U A 185 108.065 -3.405 108.037 1.00 59.11 C
ATOM 19 O4 U A 185 106.847 -3.243 108.016 1.00 58.72 O
ATOM 20 C5 U A 185 108.988 -3.021 109.052 1.00 59.76 C
ATOM 21 C6 U A 185 110.297 -3.274 108.903 1.00 60.14 C
ATOM 22 P G A 186 114.539 -0.083 108.607 1.00 57.42 P
ATOM 23 OP1 G A 186 115.896 0.495 108.259 1.00 57.82 O
ATOM 24 OP2 G A 186 114.043 0.031 110.000 1.00 57.71 O
ATOM 25 O5' G A 186 113.433 0.465 107.593 1.00 56.72 O
TER
ATOM 1 O3' A B 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 2 P A B 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 3 OP1 A B 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 4 OP2 A B 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 5 O5' A B 219 103.650 -3.267 99.241 1.00 55.79 O
ATOM 6 C5' A B 219 102.676 -3.422 100.247 1.00 55.76 C
ATOM 7 C4' A B 219 103.283 -3.999 101.484 1.00 56.27 C
ATOM 8 O4' A B 219 104.068 -5.158 101.134 1.00 56.39 O
ATOM 9 C3' A B 219 104.240 -3.093 102.228 1.00 56.79 C
ATOM 10 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 11 C2' A B 219 105.161 -4.076 102.936 1.00 57.25 C
ATOM 12 O2' A B 219 104.564 -4.508 104.135 1.00 57.40 O
ATOM 13 C1' A B 219 105.193 -5.257 101.960 1.00 56.96 C
ATOM 14 N9 A B 219 106.374 -5.253 101.091 1.00 57.10 N
ATOM 15 C8 A B 219 106.296 -5.181 99.730 1.00 56.70 C
ATOM 16 N7 A B 219 107.454 -5.193 99.115 1.00 56.91 N
ATOM 17 C5 A B 219 108.356 -5.302 100.153 1.00 57.47 C
ATOM 18 C6 A B 219 109.749 -5.346 100.173 1.00 57.94 C
ATOM 19 N6 A B 219 110.474 -5.309 99.067 1.00 57.88 N
ATOM 20 N1 A B 219 110.378 -5.417 101.360 1.00 58.47 N
ATOM 21 C2 A B 219 109.654 -5.456 102.469 1.00 58.54 C
ATOM 22 N3 A B 219 108.339 -5.418 102.576 1.00 58.14 N
ATOM 23 C4 A B 219 107.721 -5.346 101.377 1.00 57.60 C
ATOM 24 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 25 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 26 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 27 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
TER
ATOM 2 P U A 185 112.311 -2.734 112.610 1.00 62.11 P
ATOM 3 OP1 U A 185 113.439 -2.171 113.418 1.00 62.81 O
ATOM 4 OP2 U A 185 110.948 -2.145 112.756 1.00 61.71 O
ATOM 5 O5' U A 185 112.701 -2.790 111.072 1.00 61.71 O
ATOM 6 C5' U A 185 113.773 -3.616 110.630 1.00 61.92 C
ATOM 7 C4' U A 185 113.779 -3.730 109.141 1.00 61.42 C
ATOM 8 O4' U A 185 112.747 -4.640 108.731 1.00 60.90 O
ATOM 9 C3' U A 185 113.471 -2.450 108.394 1.00 61.10 C
ATOM 10 O3' U A 185 114.599 -1.639 108.248 1.00 61.47 O
ATOM 11 C2' U A 185 112.915 -2.952 107.078 1.00 60.46 C
ATOM 12 O2' U A 185 113.949 -3.328 106.192 1.00 60.54 O
ATOM 13 C1' U A 185 112.174 -4.205 107.527 1.00 60.32 C
ATOM 14 N1 U A 185 110.761 -3.917 107.775 1.00 59.92 N
ATOM 15 C2 U A 185 109.925 -4.292 106.752 1.00 59.31 C
ATOM 16 O2 U A 185 110.308 -4.857 105.757 1.00 59.12 O
ATOM 17 N3 U A 185 108.625 -4.017 106.956 1.00 58.94 N
ATOM 18 C4 U A 185 108.065 -3.405 108.037 1.00 59.11 C
ATOM 19 O4 U A 185 106.847 -3.243 108.016 1.00 58.72 O
ATOM 20 C5 U A 185 108.988 -3.021 109.052 1.00 59.76 C
ATOM 21 C6 U A 185 110.297 -3.274 108.903 1.00 60.14 C
ATOM 22 P G A 186 114.539 -0.083 108.607 1.00 57.42 P
ATOM 23 OP1 G A 186 115.896 0.495 108.259 1.00 57.82 O
ATOM 24 OP2 G A 186 114.043 0.031 110.000 1.00 57.71 O
ATOM 25 O5' G A 186 113.433 0.465 107.593 1.00 56.72 O
TER
ATOM 1 O3' A B 218 102.944 -0.926 98.947 1.00 44.55 O
ATOM 2 P A B 219 103.468 -2.176 98.106 1.00 55.48 P
ATOM 3 OP1 A B 219 104.786 -1.830 97.537 1.00 55.74 O
ATOM 4 OP2 A B 219 102.377 -2.565 97.179 1.00 54.91 O
ATOM 5 O5' A B 219 103.650 -3.267 99.241 1.00 55.79 O
ATOM 6 C5' A B 219 102.676 -3.422 100.247 1.00 55.76 C
ATOM 7 C4' A B 219 103.283 -3.999 101.484 1.00 56.27 C
ATOM 8 O4' A B 219 104.068 -5.158 101.134 1.00 56.39 O
ATOM 9 C3' A B 219 104.240 -3.093 102.228 1.00 56.79 C
ATOM 10 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 11 C2' A B 219 105.161 -4.076 102.936 1.00 57.25 C
ATOM 12 O2' A B 219 104.564 -4.508 104.135 1.00 57.40 O
ATOM 13 C1' A B 219 105.193 -5.257 101.960 1.00 56.96 C
ATOM 14 N9 A B 219 106.374 -5.253 101.091 1.00 57.10 N
ATOM 15 C8 A B 219 106.296 -5.181 99.730 1.00 56.70 C
ATOM 16 N7 A B 219 107.454 -5.193 99.115 1.00 56.91 N
ATOM 17 C5 A B 219 108.356 -5.302 100.153 1.00 57.47 C
ATOM 18 C6 A B 219 109.749 -5.346 100.173 1.00 57.94 C
ATOM 19 N6 A B 219 110.474 -5.309 99.067 1.00 57.88 N
ATOM 20 N1 A B 219 110.378 -5.417 101.360 1.00 58.47 N
ATOM 21 C2 A B 219 109.654 -5.456 102.469 1.00 58.54 C
ATOM 22 N3 A B 219 108.339 -5.418 102.576 1.00 58.14 N
ATOM 23 C4 A B 219 107.721 -5.346 101.377 1.00 57.60 C
ATOM 24 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 25 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 26 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 27 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
TER
Atoms:
C4: (108.065,-3.405,108.037)
N3: (108.625,-4.017,106.956)
OP1: (113.439,-2.171,113.418)
OP2: (110.948,-2.145,112.756)
C2: (109.925,-4.292,106.752)
C1': (112.174,-4.205,107.527)
C3': (113.471,-2.450,108.394)
O5': (112.701,-2.790,111.072)
O4': (112.747,-4.640,108.731)
C5': (113.773,-3.616,110.630)
P: (112.311,-2.734,112.610)
C4': (113.779,-3.730,109.141)
C2': (112.915,-2.952,107.078)
O2': (113.949,-3.328,106.192)
N1: (110.761,-3.917,107.775)
O4: (106.847,-3.243,108.016)
O2: (110.308,-4.857,105.757)
C6: (110.297,-3.274,108.903)
C5: (108.988,-3.021,109.052)
O3': (114.599,-1.639,108.248)
N3: (108.625,-4.017,106.956)
OP1: (113.439,-2.171,113.418)
OP2: (110.948,-2.145,112.756)
C2: (109.925,-4.292,106.752)
C1': (112.174,-4.205,107.527)
C3': (113.471,-2.450,108.394)
O5': (112.701,-2.790,111.072)
O4': (112.747,-4.640,108.731)
C5': (113.773,-3.616,110.630)
P: (112.311,-2.734,112.610)
C4': (113.779,-3.730,109.141)
C2': (112.915,-2.952,107.078)
O2': (113.949,-3.328,106.192)
N1: (110.761,-3.917,107.775)
O4: (106.847,-3.243,108.016)
O2: (110.308,-4.857,105.757)
C6: (110.297,-3.274,108.903)
C5: (108.988,-3.021,109.052)
O3': (114.599,-1.639,108.248)
OP1: (104.786,-1.830,97.537)
OP2: (102.377,-2.565,97.179)
C3': (104.240,-3.093,102.228)
C1': (105.193,-5.257,101.960)
C5': (102.676,-3.422,100.247)
O4': (104.068,-5.158,101.134)
C8: (106.296,-5.181,99.730)
O2': (104.564,-4.508,104.135)
C6: (109.749,-5.346,100.173)
C5: (108.356,-5.302,100.153)
C4: (107.721,-5.346,101.377)
P: (103.468,-2.176,98.106)
C4': (103.283,-3.999,101.484)
C2': (105.161,-4.076,102.936)
C2: (109.654,-5.456,102.469)
N1: (110.378,-5.417,101.360)
N3: (108.339,-5.418,102.576)
N6: (110.474,-5.309,99.067)
N7: (107.454,-5.193,99.115)
N9: (106.374,-5.253,101.091)
O5': (103.650,-3.267,99.241)
O3': (103.563,-2.215,103.117)
OP2: (102.377,-2.565,97.179)
C3': (104.240,-3.093,102.228)
C1': (105.193,-5.257,101.960)
C5': (102.676,-3.422,100.247)
O4': (104.068,-5.158,101.134)
C8: (106.296,-5.181,99.730)
O2': (104.564,-4.508,104.135)
C6: (109.749,-5.346,100.173)
C5: (108.356,-5.302,100.153)
C4: (107.721,-5.346,101.377)
P: (103.468,-2.176,98.106)
C4': (103.283,-3.999,101.484)
C2': (105.161,-4.076,102.936)
C2: (109.654,-5.456,102.469)
N1: (110.378,-5.417,101.360)
N3: (108.339,-5.418,102.576)
N6: (110.474,-5.309,99.067)
N7: (107.454,-5.193,99.115)
N9: (106.374,-5.253,101.091)
O5': (103.650,-3.267,99.241)
O3': (103.563,-2.215,103.117)
Image (generated by PyMOL):