ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A1271:A1278

Extra

PDB:
ATOM 1 O3' G A1270 -116.430 145.273 74.326 1.00 49.29 O
ATOM 2 P G A1271 -115.474 146.054 75.368 1.00112.70 P
ATOM 3 OP1 G A1271 -116.315 147.057 76.053 1.00 53.01 O
ATOM 4 OP2 G A1271 -114.223 146.492 74.686 1.00 51.68 O
ATOM 5 O5' G A1271 -115.093 144.938 76.442 1.00102.61 O
ATOM 6 C5' G A1271 -116.121 144.274 77.205 1.00101.24 C
ATOM 7 C4' G A1271 -115.515 143.330 78.222 1.00100.75 C
ATOM 8 O4' G A1271 -114.975 142.138 77.585 1.00101.73 O
ATOM 9 C3' G A1271 -114.359 143.868 79.044 1.00100.28 C
ATOM 10 O3' G A1271 -114.796 144.704 80.105 1.00100.42 O
ATOM 11 C2' G A1271 -113.690 142.587 79.535 1.00100.25 C
ATOM 12 O2' G A1271 -114.347 142.022 80.651 1.00 99.55 O
ATOM 13 C1' G A1271 -113.863 141.660 78.331 1.00 99.88 C
ATOM 14 N9 G A1271 -112.673 141.689 77.483 1.00 38.41 N
ATOM 15 C8 G A1271 -112.455 142.499 76.395 1.00 36.79 C
ATOM 16 N7 G A1271 -111.269 142.352 75.870 1.00 34.41 N
ATOM 17 C5 G A1271 -110.669 141.375 76.651 1.00 34.38 C
ATOM 18 C6 G A1271 -109.364 140.809 76.571 1.00 32.91 C
ATOM 19 O6 G A1271 -108.444 141.089 75.783 1.00 32.02 O
ATOM 20 N1 G A1271 -109.168 139.836 77.546 1.00 31.88 N
ATOM 21 C2 G A1271 -110.095 139.471 78.490 1.00 32.23 C
ATOM 22 N2 G A1271 -109.707 138.517 79.346 1.00 31.70 N
ATOM 23 N3 G A1271 -111.310 140.004 78.588 1.00 34.78 N
ATOM 24 C4 G A1271 -111.527 140.941 77.641 1.00 35.99 C
ATOM 25 P C A1272 -113.710 145.499 80.988 1.00 58.93 P
ATOM 26 OP1 C A1272 -114.481 146.388 81.917 1.00 31.29 O
ATOM 27 OP2 C A1272 -112.616 146.068 80.131 1.00 27.28 O
ATOM 28 O5' C A1272 -113.069 144.358 81.879 1.00 72.11 O
TER

ATOM 1 O3' U B1277 -107.748 138.910 89.792 1.00 31.04 O
ATOM 2 P U B1278 -109.177 138.764 89.064 1.00 42.73 P
ATOM 3 OP1 U B1278 -109.466 140.081 88.431 1.00 68.39 O
ATOM 4 OP2 U B1278 -110.134 138.191 90.058 1.00 68.94 O
ATOM 5 O5' U B1278 -108.951 137.692 87.900 1.00 42.91 O
ATOM 6 C5' U B1278 -109.216 136.281 88.114 1.00 43.38 C
ATOM 7 C4' U B1278 -109.388 135.566 86.791 1.00 44.04 C
ATOM 8 O4' U B1278 -110.535 136.124 86.098 1.00 45.06 O
ATOM 9 C3' U B1278 -108.213 135.647 85.816 1.00 44.26 C
ATOM 10 O3' U B1278 -108.179 134.433 85.048 1.00 43.86 O
ATOM 11 C2' U B1278 -108.627 136.790 84.886 1.00 44.69 C
ATOM 12 O2' U B1278 -108.049 136.730 83.595 1.00 43.54 O
ATOM 13 C1' U B1278 -110.143 136.587 84.819 1.00 46.07 C
ATOM 14 N1 U B1278 -110.932 137.788 84.503 1.00 90.65 N
ATOM 15 C2 U B1278 -111.607 137.829 83.292 1.00 91.71 C
ATOM 16 O2 U B1278 -111.551 136.941 82.462 1.00 91.27 O
ATOM 17 N3 U B1278 -112.353 138.958 83.087 1.00 93.67 N
ATOM 18 C4 U B1278 -112.488 140.030 83.943 1.00 92.98 C
ATOM 19 O4 U B1278 -113.247 140.949 83.642 1.00 91.88 O
ATOM 20 C5 U B1278 -111.746 139.923 85.157 1.00 92.28 C
ATOM 21 C6 U B1278 -111.014 138.836 85.391 1.00 91.47 C
ATOM 22 P C B1279 -107.103 133.284 85.379 1.00 64.55 P
ATOM 23 OP1 C B1279 -107.130 132.319 84.244 1.00 84.19 O
ATOM 24 OP2 C B1279 -107.364 132.794 86.764 1.00 82.68 O
ATOM 25 O5' C B1279 -105.701 134.048 85.361 1.00 55.60 O
TER

Atoms:
OP1: (-116.315,147.057,76.053)
OP2: (-114.223,146.492,74.686)
C3': (-114.359,143.868,79.044)
C1': (-113.863,141.660,78.331)
C5': (-116.121,144.274,77.205)
O6: (-108.444,141.089,75.783)
O4': (-114.975,142.138,77.585)
C8: (-112.455,142.499,76.395)
C2: (-110.095,139.471,78.490)
C6: (-109.364,140.809,76.571)
C5: (-110.669,141.375,76.651)
C4: (-111.527,140.941,77.641)
P: (-115.474,146.054,75.368)
C4': (-115.515,143.330,78.222)
C2': (-113.690,142.587,79.535)
O2': (-114.347,142.022,80.651)
N1: (-109.168,139.836,77.546)
N2: (-109.707,138.517,79.346)
N3: (-111.310,140.004,78.588)
N7: (-111.269,142.352,75.870)
N9: (-112.673,141.689,77.483)
O5': (-115.093,144.938,76.442)
O3': (-114.796,144.704,80.105)
C4: (-112.488,140.030,83.943)
N3: (-112.353,138.958,83.087)
OP1: (-109.466,140.081,88.431)
OP2: (-110.134,138.191,90.058)
C2: (-111.607,137.829,83.292)
C1': (-110.143,136.587,84.819)
C3': (-108.213,135.647,85.816)
O5': (-108.951,137.692,87.900)
O4': (-110.535,136.124,86.098)
C5': (-109.216,136.281,88.114)
P: (-109.177,138.764,89.064)
C4': (-109.388,135.566,86.791)
C2': (-108.627,136.790,84.886)
O2': (-108.049,136.730,83.595)
N1: (-110.932,137.788,84.503)
O4: (-113.247,140.949,83.642)
O2: (-111.551,136.941,82.462)
C6: (-111.014,138.836,85.391)
C5: (-111.746,139.923,85.157)
O3': (-108.179,134.433,85.048)
Image (generated by PyMOL):
PyMOL image
show in jmol