Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:99:97
Extra
PDB:
ATOM 1 O3' C A 8 52.007 42.626 98.876 1.00 50.89 O
ATOM 2 P C A 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 3 OP1 C A 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 4 OP2 C A 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 5 O5' C A 9 54.325 42.680 99.964 1.00 50.78 O
ATOM 6 C5' C A 9 53.980 42.505 101.343 1.00 50.85 C
ATOM 7 C4' C A 9 54.987 41.609 102.033 1.00 51.80 C
ATOM 8 O4' C A 9 55.055 40.336 101.329 1.00 51.06 O
ATOM 9 C3' C A 9 56.423 42.125 102.127 1.00 51.38 C
ATOM 10 O3' C A 9 57.013 41.657 103.334 1.00 52.37 O
ATOM 11 C2' C A 9 57.106 41.424 100.961 1.00 51.50 C
ATOM 12 O2' C A 9 58.485 41.228 101.198 1.00 52.80 O
ATOM 13 C1' C A 9 56.388 40.075 100.949 1.00 51.37 C
ATOM 14 N1 C A 9 56.383 39.455 99.616 1.00 51.39 N
ATOM 15 C2 C A 9 57.128 38.285 99.400 1.00 51.54 C
ATOM 16 O2 C A 9 57.714 37.749 100.356 1.00 51.93 O
ATOM 17 N3 C A 9 57.180 37.764 98.156 1.00 50.29 N
ATOM 18 C4 C A 9 56.514 38.347 97.159 1.00 50.05 C
ATOM 19 N4 C A 9 56.613 37.814 95.945 1.00 51.22 N
ATOM 20 C5 C A 9 55.719 39.507 97.360 1.00 50.90 C
ATOM 21 C6 C A 9 55.681 40.023 98.590 1.00 51.30 C
ATOM 22 P A A 10 56.994 42.580 104.643 1.00 52.46 P
ATOM 23 OP1 A A 10 55.629 43.129 104.820 1.00 53.18 O
ATOM 24 OP2 A A 10 58.147 43.502 104.564 1.00 54.22 O
ATOM 25 O5' A A 10 57.263 41.553 105.827 1.00 53.22 O
TER
ATOM 1 O3' G B 6 56.005 34.179 92.297 1.00 48.55 O
ATOM 2 P G B 7 56.219 35.534 93.139 1.00 48.47 P
ATOM 3 OP1 G B 7 56.663 36.565 92.170 1.00 48.89 O
ATOM 4 OP2 G B 7 57.051 35.253 94.341 1.00 45.86 O
ATOM 5 O5' G B 7 54.741 35.915 93.583 1.00 48.15 O
ATOM 6 C5' G B 7 53.744 36.173 92.584 1.00 49.45 C
ATOM 7 C4' G B 7 52.405 36.359 93.229 1.00 50.35 C
ATOM 8 O4' G B 7 51.985 35.113 93.838 1.00 49.89 O
ATOM 9 C3' G B 7 52.387 37.357 94.367 1.00 50.95 C
ATOM 10 O3' G B 7 52.292 38.686 93.866 1.00 52.85 O
ATOM 11 C2' G B 7 51.157 36.912 95.145 1.00 51.38 C
ATOM 12 O2' G B 7 49.951 37.303 94.522 1.00 49.28 O
ATOM 13 C1' G B 7 51.277 35.389 95.033 1.00 49.75 C
ATOM 14 N9 G B 7 51.986 34.758 96.145 1.00 48.33 N
ATOM 15 C8 G B 7 53.233 34.183 96.115 1.00 46.71 C
ATOM 16 N7 G B 7 53.580 33.657 97.255 1.00 46.45 N
ATOM 17 C5 G B 7 52.503 33.909 98.092 1.00 46.92 C
ATOM 18 C6 G B 7 52.297 33.560 99.446 1.00 48.39 C
ATOM 19 O6 G B 7 53.035 32.916 100.190 1.00 51.19 O
ATOM 20 N1 G B 7 51.078 34.026 99.919 1.00 47.80 N
ATOM 21 C2 G B 7 50.162 34.721 99.178 1.00 47.58 C
ATOM 22 N2 G B 7 49.046 35.090 99.820 1.00 46.96 N
ATOM 23 N3 G B 7 50.330 35.033 97.904 1.00 47.07 N
ATOM 24 C4 G B 7 51.519 34.601 97.430 1.00 47.08 C
ATOM 25 P C B 8 53.247 39.835 94.459 1.00 52.04 P
ATOM 26 OP1 C B 8 52.951 41.048 93.662 1.00 50.93 O
ATOM 27 OP2 C B 8 54.634 39.325 94.522 1.00 52.23 O
ATOM 28 O5' C B 8 52.718 40.053 95.948 1.00 50.69 O
TER
ATOM 2 P C A 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 3 OP1 C A 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 4 OP2 C A 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 5 O5' C A 9 54.325 42.680 99.964 1.00 50.78 O
ATOM 6 C5' C A 9 53.980 42.505 101.343 1.00 50.85 C
ATOM 7 C4' C A 9 54.987 41.609 102.033 1.00 51.80 C
ATOM 8 O4' C A 9 55.055 40.336 101.329 1.00 51.06 O
ATOM 9 C3' C A 9 56.423 42.125 102.127 1.00 51.38 C
ATOM 10 O3' C A 9 57.013 41.657 103.334 1.00 52.37 O
ATOM 11 C2' C A 9 57.106 41.424 100.961 1.00 51.50 C
ATOM 12 O2' C A 9 58.485 41.228 101.198 1.00 52.80 O
ATOM 13 C1' C A 9 56.388 40.075 100.949 1.00 51.37 C
ATOM 14 N1 C A 9 56.383 39.455 99.616 1.00 51.39 N
ATOM 15 C2 C A 9 57.128 38.285 99.400 1.00 51.54 C
ATOM 16 O2 C A 9 57.714 37.749 100.356 1.00 51.93 O
ATOM 17 N3 C A 9 57.180 37.764 98.156 1.00 50.29 N
ATOM 18 C4 C A 9 56.514 38.347 97.159 1.00 50.05 C
ATOM 19 N4 C A 9 56.613 37.814 95.945 1.00 51.22 N
ATOM 20 C5 C A 9 55.719 39.507 97.360 1.00 50.90 C
ATOM 21 C6 C A 9 55.681 40.023 98.590 1.00 51.30 C
ATOM 22 P A A 10 56.994 42.580 104.643 1.00 52.46 P
ATOM 23 OP1 A A 10 55.629 43.129 104.820 1.00 53.18 O
ATOM 24 OP2 A A 10 58.147 43.502 104.564 1.00 54.22 O
ATOM 25 O5' A A 10 57.263 41.553 105.827 1.00 53.22 O
TER
ATOM 1 O3' G B 6 56.005 34.179 92.297 1.00 48.55 O
ATOM 2 P G B 7 56.219 35.534 93.139 1.00 48.47 P
ATOM 3 OP1 G B 7 56.663 36.565 92.170 1.00 48.89 O
ATOM 4 OP2 G B 7 57.051 35.253 94.341 1.00 45.86 O
ATOM 5 O5' G B 7 54.741 35.915 93.583 1.00 48.15 O
ATOM 6 C5' G B 7 53.744 36.173 92.584 1.00 49.45 C
ATOM 7 C4' G B 7 52.405 36.359 93.229 1.00 50.35 C
ATOM 8 O4' G B 7 51.985 35.113 93.838 1.00 49.89 O
ATOM 9 C3' G B 7 52.387 37.357 94.367 1.00 50.95 C
ATOM 10 O3' G B 7 52.292 38.686 93.866 1.00 52.85 O
ATOM 11 C2' G B 7 51.157 36.912 95.145 1.00 51.38 C
ATOM 12 O2' G B 7 49.951 37.303 94.522 1.00 49.28 O
ATOM 13 C1' G B 7 51.277 35.389 95.033 1.00 49.75 C
ATOM 14 N9 G B 7 51.986 34.758 96.145 1.00 48.33 N
ATOM 15 C8 G B 7 53.233 34.183 96.115 1.00 46.71 C
ATOM 16 N7 G B 7 53.580 33.657 97.255 1.00 46.45 N
ATOM 17 C5 G B 7 52.503 33.909 98.092 1.00 46.92 C
ATOM 18 C6 G B 7 52.297 33.560 99.446 1.00 48.39 C
ATOM 19 O6 G B 7 53.035 32.916 100.190 1.00 51.19 O
ATOM 20 N1 G B 7 51.078 34.026 99.919 1.00 47.80 N
ATOM 21 C2 G B 7 50.162 34.721 99.178 1.00 47.58 C
ATOM 22 N2 G B 7 49.046 35.090 99.820 1.00 46.96 N
ATOM 23 N3 G B 7 50.330 35.033 97.904 1.00 47.07 N
ATOM 24 C4 G B 7 51.519 34.601 97.430 1.00 47.08 C
ATOM 25 P C B 8 53.247 39.835 94.459 1.00 52.04 P
ATOM 26 OP1 C B 8 52.951 41.048 93.662 1.00 50.93 O
ATOM 27 OP2 C B 8 54.634 39.325 94.522 1.00 52.23 O
ATOM 28 O5' C B 8 52.718 40.053 95.948 1.00 50.69 O
TER
Atoms:
C2: (57.128,38.285,99.400)
OP1: (52.994,44.754,99.616)
OP2: (54.024,43.493,97.641)
C4: (56.514,38.347,97.159)
O5': (54.325,42.680,99.964)
C3': (56.423,42.125,102.127)
C1': (56.388,40.075,100.949)
O4': (55.055,40.336,101.329)
C5': (53.980,42.505,101.343)
P: (53.368,43.478,98.970)
O2: (57.714,37.749,100.356)
C4': (54.987,41.609,102.033)
C2': (57.106,41.424,100.961)
O2': (58.485,41.228,101.198)
N1: (56.383,39.455,99.616)
N3: (57.180,37.764,98.156)
N4: (56.613,37.814,95.945)
C6: (55.681,40.023,98.590)
C5: (55.719,39.507,97.360)
O3': (57.013,41.657,103.334)
OP1: (52.994,44.754,99.616)
OP2: (54.024,43.493,97.641)
C4: (56.514,38.347,97.159)
O5': (54.325,42.680,99.964)
C3': (56.423,42.125,102.127)
C1': (56.388,40.075,100.949)
O4': (55.055,40.336,101.329)
C5': (53.980,42.505,101.343)
P: (53.368,43.478,98.970)
O2: (57.714,37.749,100.356)
C4': (54.987,41.609,102.033)
C2': (57.106,41.424,100.961)
O2': (58.485,41.228,101.198)
N1: (56.383,39.455,99.616)
N3: (57.180,37.764,98.156)
N4: (56.613,37.814,95.945)
C6: (55.681,40.023,98.590)
C5: (55.719,39.507,97.360)
O3': (57.013,41.657,103.334)
OP1: (56.663,36.565,92.170)
OP2: (57.051,35.253,94.341)
C3': (52.387,37.357,94.367)
C1': (51.277,35.389,95.033)
C5': (53.744,36.173,92.584)
O6: (53.035,32.916,100.190)
O4': (51.985,35.113,93.838)
C8: (53.233,34.183,96.115)
C2: (50.162,34.721,99.178)
C6: (52.297,33.560,99.446)
C5: (52.503,33.909,98.092)
C4: (51.519,34.601,97.430)
P: (56.219,35.534,93.139)
C4': (52.405,36.359,93.229)
C2': (51.157,36.912,95.145)
O2': (49.951,37.303,94.522)
N1: (51.078,34.026,99.919)
N2: (49.046,35.090,99.820)
N3: (50.330,35.033,97.904)
N7: (53.580,33.657,97.255)
N9: (51.986,34.758,96.145)
O5': (54.741,35.915,93.583)
O3': (52.292,38.686,93.866)
OP2: (57.051,35.253,94.341)
C3': (52.387,37.357,94.367)
C1': (51.277,35.389,95.033)
C5': (53.744,36.173,92.584)
O6: (53.035,32.916,100.190)
O4': (51.985,35.113,93.838)
C8: (53.233,34.183,96.115)
C2: (50.162,34.721,99.178)
C6: (52.297,33.560,99.446)
C5: (52.503,33.909,98.092)
C4: (51.519,34.601,97.430)
P: (56.219,35.534,93.139)
C4': (52.405,36.359,93.229)
C2': (51.157,36.912,95.145)
O2': (49.951,37.303,94.522)
N1: (51.078,34.026,99.919)
N2: (49.046,35.090,99.820)
N3: (50.330,35.033,97.904)
N7: (53.580,33.657,97.255)
N9: (51.986,34.758,96.145)
O5': (54.741,35.915,93.583)
O3': (52.292,38.686,93.866)
Image (generated by PyMOL):