Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01086:02016
Extra
PDB:
ATOM 1 O3' C A1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 2 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C A1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C A1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C A1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C A1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C A1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C A1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C A1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C A1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C A1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C A1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C A1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C A1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C A1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C A1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C A1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
TER
ATOM 1 O3' U B2015 42.355 108.555 109.798 1.00 30.30 O
ATOM 2 P G B2016 43.618 107.915 109.055 1.00 30.24 P
ATOM 3 OP1 G B2016 43.377 106.459 108.905 1.00 30.39 O
ATOM 4 OP2 G B2016 44.841 108.386 109.754 1.00 31.25 O
ATOM 5 O5' G B2016 43.573 108.576 107.612 1.00 29.57 O
ATOM 6 C5' G B2016 42.433 108.408 106.761 1.00 29.15 C
ATOM 7 C4' G B2016 42.511 109.372 105.610 1.00 28.72 C
ATOM 8 O4' G B2016 42.440 110.726 106.121 1.00 28.98 O
ATOM 9 C3' G B2016 43.815 109.324 104.837 1.00 28.22 C
ATOM 10 O3' G B2016 43.770 108.298 103.855 1.00 30.13 O
ATOM 11 C2' G B2016 43.872 110.712 104.223 1.00 28.94 C
ATOM 12 O2' G B2016 43.041 110.824 103.088 1.00 27.74 O
ATOM 13 C1' G B2016 43.287 111.565 105.355 1.00 31.02 C
ATOM 14 N9 G B2016 44.293 112.159 106.240 1.00 32.75 N
ATOM 15 C8 G B2016 44.823 111.618 107.387 1.00 32.65 C
ATOM 16 N7 G B2016 45.724 112.380 107.945 1.00 32.53 N
ATOM 17 C5 G B2016 45.794 113.494 107.121 1.00 32.76 C
ATOM 18 C6 G B2016 46.604 114.649 107.207 1.00 34.03 C
ATOM 19 O6 G B2016 47.466 114.930 108.052 1.00 36.63 O
ATOM 20 N1 G B2016 46.342 115.530 106.168 1.00 33.97 N
ATOM 21 C2 G B2016 45.430 115.327 105.170 1.00 32.68 C
ATOM 22 N2 G B2016 45.322 116.300 104.260 1.00 34.44 N
ATOM 23 N3 G B2016 44.680 114.253 105.070 1.00 32.29 N
ATOM 24 C4 G B2016 44.910 113.382 106.072 1.00 32.59 C
ATOM 25 P C B2017 45.001 107.275 103.701 1.00 31.85 P
ATOM 26 OP1 C B2017 44.544 106.212 102.772 1.00 30.38 O
ATOM 27 OP2 C B2017 45.499 106.898 105.063 1.00 31.14 O
ATOM 28 O5' C B2017 46.113 108.141 102.961 1.00 30.07 O
TER
ATOM 2 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 3 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 4 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 5 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
ATOM 6 C5' C A1086 49.316 99.608 112.173 1.00 42.65 C
ATOM 7 C4' C A1086 50.027 100.876 112.577 1.00 41.71 C
ATOM 8 O4' C A1086 50.197 101.726 111.420 1.00 39.68 O
ATOM 9 C3' C A1086 49.306 101.744 113.603 1.00 41.49 C
ATOM 10 O3' C A1086 49.583 101.317 114.942 1.00 42.66 O
ATOM 11 C2' C A1086 49.905 103.121 113.340 1.00 40.73 C
ATOM 12 O2' C A1086 51.146 103.305 113.990 1.00 42.08 O
ATOM 13 C1' C A1086 50.122 103.086 111.820 1.00 39.85 C
ATOM 14 N1 C A1086 49.070 103.759 111.027 1.00 38.75 N
ATOM 15 C2 C A1086 48.877 105.140 111.183 1.00 38.55 C
ATOM 16 O2 C A1086 49.611 105.773 111.960 1.00 38.58 O
ATOM 17 N3 C A1086 47.903 105.751 110.474 1.00 38.93 N
ATOM 18 C4 C A1086 47.151 105.048 109.625 1.00 38.56 C
ATOM 19 N4 C A1086 46.203 105.698 108.941 1.00 39.42 N
ATOM 20 C5 C A1086 47.337 103.649 109.436 1.00 37.70 C
ATOM 21 C6 C A1086 48.292 103.051 110.152 1.00 37.86 C
ATOM 22 P U A1087 48.380 100.950 115.947 1.00 42.61 P
ATOM 23 OP1 U A1087 48.963 100.881 117.312 1.00 40.03 O
ATOM 24 OP2 U A1087 47.650 99.777 115.397 1.00 41.51 O
ATOM 25 O5' U A1087 47.415 102.209 115.889 1.00 41.19 O
TER
ATOM 1 O3' U B2015 42.355 108.555 109.798 1.00 30.30 O
ATOM 2 P G B2016 43.618 107.915 109.055 1.00 30.24 P
ATOM 3 OP1 G B2016 43.377 106.459 108.905 1.00 30.39 O
ATOM 4 OP2 G B2016 44.841 108.386 109.754 1.00 31.25 O
ATOM 5 O5' G B2016 43.573 108.576 107.612 1.00 29.57 O
ATOM 6 C5' G B2016 42.433 108.408 106.761 1.00 29.15 C
ATOM 7 C4' G B2016 42.511 109.372 105.610 1.00 28.72 C
ATOM 8 O4' G B2016 42.440 110.726 106.121 1.00 28.98 O
ATOM 9 C3' G B2016 43.815 109.324 104.837 1.00 28.22 C
ATOM 10 O3' G B2016 43.770 108.298 103.855 1.00 30.13 O
ATOM 11 C2' G B2016 43.872 110.712 104.223 1.00 28.94 C
ATOM 12 O2' G B2016 43.041 110.824 103.088 1.00 27.74 O
ATOM 13 C1' G B2016 43.287 111.565 105.355 1.00 31.02 C
ATOM 14 N9 G B2016 44.293 112.159 106.240 1.00 32.75 N
ATOM 15 C8 G B2016 44.823 111.618 107.387 1.00 32.65 C
ATOM 16 N7 G B2016 45.724 112.380 107.945 1.00 32.53 N
ATOM 17 C5 G B2016 45.794 113.494 107.121 1.00 32.76 C
ATOM 18 C6 G B2016 46.604 114.649 107.207 1.00 34.03 C
ATOM 19 O6 G B2016 47.466 114.930 108.052 1.00 36.63 O
ATOM 20 N1 G B2016 46.342 115.530 106.168 1.00 33.97 N
ATOM 21 C2 G B2016 45.430 115.327 105.170 1.00 32.68 C
ATOM 22 N2 G B2016 45.322 116.300 104.260 1.00 34.44 N
ATOM 23 N3 G B2016 44.680 114.253 105.070 1.00 32.29 N
ATOM 24 C4 G B2016 44.910 113.382 106.072 1.00 32.59 C
ATOM 25 P C B2017 45.001 107.275 103.701 1.00 31.85 P
ATOM 26 OP1 C B2017 44.544 106.212 102.772 1.00 30.38 O
ATOM 27 OP2 C B2017 45.499 106.898 105.063 1.00 31.14 O
ATOM 28 O5' C B2017 46.113 108.141 102.961 1.00 30.07 O
TER
Atoms:
C2: (48.877,105.140,111.183)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
OP1: (46.982,99.888,109.743)
OP2: (47.438,97.662,110.918)
C4: (47.151,105.048,109.625)
O5': (47.908,99.856,112.048)
C3': (49.306,101.744,113.603)
C1': (50.122,103.086,111.820)
O4': (50.197,101.726,111.420)
C5': (49.316,99.608,112.173)
P: (47.012,99.082,110.985)
O2: (49.611,105.773,111.960)
C4': (50.027,100.876,112.577)
C2': (49.905,103.121,113.340)
O2': (51.146,103.305,113.990)
N1: (49.070,103.759,111.027)
N3: (47.903,105.751,110.474)
N4: (46.203,105.698,108.941)
C6: (48.292,103.051,110.152)
C5: (47.337,103.649,109.436)
O3': (49.583,101.317,114.942)
OP1: (43.377,106.459,108.905)
OP2: (44.841,108.386,109.754)
C3': (43.815,109.324,104.837)
C1': (43.287,111.565,105.355)
C5': (42.433,108.408,106.761)
O6: (47.466,114.930,108.052)
O4': (42.440,110.726,106.121)
C8: (44.823,111.618,107.387)
C2: (45.430,115.327,105.170)
C6: (46.604,114.649,107.207)
C5: (45.794,113.494,107.121)
C4: (44.910,113.382,106.072)
P: (43.618,107.915,109.055)
C4': (42.511,109.372,105.610)
C2': (43.872,110.712,104.223)
O2': (43.041,110.824,103.088)
N1: (46.342,115.530,106.168)
N2: (45.322,116.300,104.260)
N3: (44.680,114.253,105.070)
N7: (45.724,112.380,107.945)
N9: (44.293,112.159,106.240)
O5': (43.573,108.576,107.612)
O3': (43.770,108.298,103.855)
OP2: (44.841,108.386,109.754)
C3': (43.815,109.324,104.837)
C1': (43.287,111.565,105.355)
C5': (42.433,108.408,106.761)
O6: (47.466,114.930,108.052)
O4': (42.440,110.726,106.121)
C8: (44.823,111.618,107.387)
C2: (45.430,115.327,105.170)
C6: (46.604,114.649,107.207)
C5: (45.794,113.494,107.121)
C4: (44.910,113.382,106.072)
P: (43.618,107.915,109.055)
C4': (42.511,109.372,105.610)
C2': (43.872,110.712,104.223)
O2': (43.041,110.824,103.088)
N1: (46.342,115.530,106.168)
N2: (45.322,116.300,104.260)
N3: (44.680,114.253,105.070)
N7: (45.724,112.380,107.945)
N9: (44.293,112.159,106.240)
O5': (43.573,108.576,107.612)
O3': (43.770,108.298,103.855)
Image (generated by PyMOL):