Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A1380:X6
Extra
PDB:
ATOM 1 O3' C A1379 -99.410 27.652 -14.259 1.00 0.79 O
ATOM 2 P C A1380 -99.046 26.182 -14.791 1.00 24.61 P
ATOM 3 OP1 C A1380 -98.023 26.389 -15.861 1.00 25.89 O
ATOM 4 OP2 C A1380 -100.301 25.434 -15.091 1.00 22.77 O
ATOM 5 O5' C A1380 -98.350 25.475 -13.551 1.00 11.18 O
ATOM 6 C5' C A1380 -97.042 25.886 -13.123 1.00 11.71 C
ATOM 7 C4' C A1380 -96.695 25.239 -11.805 1.00 13.22 C
ATOM 8 O4' C A1380 -97.788 25.490 -10.889 1.00 15.24 O
ATOM 9 C3' C A1380 -96.533 23.727 -11.804 1.00 13.18 C
ATOM 10 O3' C A1380 -95.201 23.361 -12.162 1.00 10.35 O
ATOM 11 C2' C A1380 -96.862 23.370 -10.365 1.00 14.69 C
ATOM 12 O2' C A1380 -95.757 23.625 -9.523 1.00 14.81 O
ATOM 13 C1' C A1380 -97.958 24.385 -10.044 1.00 15.99 C
ATOM 14 N1 C A1380 -99.317 23.879 -10.241 1.00 11.92 N
ATOM 15 C2 C A1380 -99.864 23.094 -9.247 1.00 12.11 C
ATOM 16 O2 C A1380 -99.181 22.854 -8.253 1.00 12.76 O
ATOM 17 N3 C A1380 -101.112 22.613 -9.378 1.00 13.92 N
ATOM 18 C4 C A1380 -101.814 22.898 -10.464 1.00 13.82 C
ATOM 19 N4 C A1380 -103.051 22.398 -10.546 1.00 14.01 N
ATOM 20 C5 C A1380 -101.281 23.708 -11.515 1.00 15.16 C
ATOM 21 C6 C A1380 -100.036 24.171 -11.363 1.00 14.20 C
ATOM 22 P C A1381 -94.903 21.895 -12.786 1.00 2.97 P
ATOM 23 OP1 C A1381 -93.652 22.048 -13.609 1.00 0.96 O
ATOM 24 OP2 C A1381 -96.144 21.292 -13.402 1.00 0.79 O
ATOM 25 O5' C A1381 -94.510 21.052 -11.494 1.00 12.26 O
TER
ATOM 1 O3' U B 5 -106.263 21.341 -6.679 1.00 11.34 O
ATOM 2 P G B 6 -106.084 22.421 -7.861 1.00 19.29 P
ATOM 3 OP1 G B 6 -105.354 21.709 -8.945 1.00 26.40 O
ATOM 4 OP2 G B 6 -105.534 23.696 -7.324 1.00 26.40 O
ATOM 5 O5' G B 6 -107.566 22.711 -8.362 1.00 74.22 O
ATOM 6 C5' G B 6 -108.417 21.644 -8.794 1.00 74.22 C
ATOM 7 C4' G B 6 -109.809 22.159 -9.048 1.00 74.22 C
ATOM 8 O4' G B 6 -110.375 22.665 -7.827 1.00 74.22 O
ATOM 9 C3' G B 6 -109.934 23.288 -10.057 1.00 74.22 C
ATOM 10 O3' G B 6 -110.117 22.604 -11.282 1.00 74.22 O
ATOM 11 C2' G B 6 -111.212 24.014 -9.628 1.00 74.22 C
ATOM 12 O2' G B 6 -112.375 23.483 -10.243 1.00 74.22 O
ATOM 13 C1' G B 6 -111.275 23.708 -8.128 1.00 74.22 C
ATOM 14 N9 G B 6 -111.075 24.777 -7.157 1.00 24.18 N
ATOM 15 C8 G B 6 -109.893 25.166 -6.584 1.00 24.18 C
ATOM 16 N7 G B 6 -110.049 26.050 -5.643 1.00 24.18 N
ATOM 17 C5 G B 6 -111.410 26.280 -5.622 1.00 24.18 C
ATOM 18 C6 G B 6 -112.164 27.121 -4.803 1.00 24.18 C
ATOM 19 O6 G B 6 -111.776 27.844 -3.888 1.00 24.18 O
ATOM 20 N1 G B 6 -113.511 27.067 -5.121 1.00 24.18 N
ATOM 21 C2 G B 6 -114.056 26.287 -6.106 1.00 24.18 C
ATOM 22 N2 G B 6 -115.384 26.373 -6.267 1.00 24.18 N
ATOM 23 N3 G B 6 -113.355 25.482 -6.872 1.00 24.18 N
ATOM 24 C4 G B 6 -112.049 25.528 -6.576 1.00 24.18 C
ATOM 25 P U B 7 -110.234 23.399 -12.665 1.00 62.50 P
ATOM 26 OP1 U B 7 -109.070 24.323 -12.786 1.00 86.19 O
ATOM 27 OP2 U B 7 -111.621 23.918 -12.812 1.00 86.19 O
ATOM 28 O5' U B 7 -110.056 22.217 -13.706 1.00 15.44 O
TER
ATOM 2 P C A1380 -99.046 26.182 -14.791 1.00 24.61 P
ATOM 3 OP1 C A1380 -98.023 26.389 -15.861 1.00 25.89 O
ATOM 4 OP2 C A1380 -100.301 25.434 -15.091 1.00 22.77 O
ATOM 5 O5' C A1380 -98.350 25.475 -13.551 1.00 11.18 O
ATOM 6 C5' C A1380 -97.042 25.886 -13.123 1.00 11.71 C
ATOM 7 C4' C A1380 -96.695 25.239 -11.805 1.00 13.22 C
ATOM 8 O4' C A1380 -97.788 25.490 -10.889 1.00 15.24 O
ATOM 9 C3' C A1380 -96.533 23.727 -11.804 1.00 13.18 C
ATOM 10 O3' C A1380 -95.201 23.361 -12.162 1.00 10.35 O
ATOM 11 C2' C A1380 -96.862 23.370 -10.365 1.00 14.69 C
ATOM 12 O2' C A1380 -95.757 23.625 -9.523 1.00 14.81 O
ATOM 13 C1' C A1380 -97.958 24.385 -10.044 1.00 15.99 C
ATOM 14 N1 C A1380 -99.317 23.879 -10.241 1.00 11.92 N
ATOM 15 C2 C A1380 -99.864 23.094 -9.247 1.00 12.11 C
ATOM 16 O2 C A1380 -99.181 22.854 -8.253 1.00 12.76 O
ATOM 17 N3 C A1380 -101.112 22.613 -9.378 1.00 13.92 N
ATOM 18 C4 C A1380 -101.814 22.898 -10.464 1.00 13.82 C
ATOM 19 N4 C A1380 -103.051 22.398 -10.546 1.00 14.01 N
ATOM 20 C5 C A1380 -101.281 23.708 -11.515 1.00 15.16 C
ATOM 21 C6 C A1380 -100.036 24.171 -11.363 1.00 14.20 C
ATOM 22 P C A1381 -94.903 21.895 -12.786 1.00 2.97 P
ATOM 23 OP1 C A1381 -93.652 22.048 -13.609 1.00 0.96 O
ATOM 24 OP2 C A1381 -96.144 21.292 -13.402 1.00 0.79 O
ATOM 25 O5' C A1381 -94.510 21.052 -11.494 1.00 12.26 O
TER
ATOM 1 O3' U B 5 -106.263 21.341 -6.679 1.00 11.34 O
ATOM 2 P G B 6 -106.084 22.421 -7.861 1.00 19.29 P
ATOM 3 OP1 G B 6 -105.354 21.709 -8.945 1.00 26.40 O
ATOM 4 OP2 G B 6 -105.534 23.696 -7.324 1.00 26.40 O
ATOM 5 O5' G B 6 -107.566 22.711 -8.362 1.00 74.22 O
ATOM 6 C5' G B 6 -108.417 21.644 -8.794 1.00 74.22 C
ATOM 7 C4' G B 6 -109.809 22.159 -9.048 1.00 74.22 C
ATOM 8 O4' G B 6 -110.375 22.665 -7.827 1.00 74.22 O
ATOM 9 C3' G B 6 -109.934 23.288 -10.057 1.00 74.22 C
ATOM 10 O3' G B 6 -110.117 22.604 -11.282 1.00 74.22 O
ATOM 11 C2' G B 6 -111.212 24.014 -9.628 1.00 74.22 C
ATOM 12 O2' G B 6 -112.375 23.483 -10.243 1.00 74.22 O
ATOM 13 C1' G B 6 -111.275 23.708 -8.128 1.00 74.22 C
ATOM 14 N9 G B 6 -111.075 24.777 -7.157 1.00 24.18 N
ATOM 15 C8 G B 6 -109.893 25.166 -6.584 1.00 24.18 C
ATOM 16 N7 G B 6 -110.049 26.050 -5.643 1.00 24.18 N
ATOM 17 C5 G B 6 -111.410 26.280 -5.622 1.00 24.18 C
ATOM 18 C6 G B 6 -112.164 27.121 -4.803 1.00 24.18 C
ATOM 19 O6 G B 6 -111.776 27.844 -3.888 1.00 24.18 O
ATOM 20 N1 G B 6 -113.511 27.067 -5.121 1.00 24.18 N
ATOM 21 C2 G B 6 -114.056 26.287 -6.106 1.00 24.18 C
ATOM 22 N2 G B 6 -115.384 26.373 -6.267 1.00 24.18 N
ATOM 23 N3 G B 6 -113.355 25.482 -6.872 1.00 24.18 N
ATOM 24 C4 G B 6 -112.049 25.528 -6.576 1.00 24.18 C
ATOM 25 P U B 7 -110.234 23.399 -12.665 1.00 62.50 P
ATOM 26 OP1 U B 7 -109.070 24.323 -12.786 1.00 86.19 O
ATOM 27 OP2 U B 7 -111.621 23.918 -12.812 1.00 86.19 O
ATOM 28 O5' U B 7 -110.056 22.217 -13.706 1.00 15.44 O
TER
Atoms:
C2: (-99.864,23.094,-9.247)
OP1: (-98.023,26.389,-15.861)
OP2: (-100.301,25.434,-15.091)
C4: (-101.814,22.898,-10.464)
O5': (-98.350,25.475,-13.551)
C3': (-96.533,23.727,-11.804)
C1': (-97.958,24.385,-10.044)
O4': (-97.788,25.490,-10.889)
C5': (-97.042,25.886,-13.123)
P: (-99.046,26.182,-14.791)
O2: (-99.181,22.854,-8.253)
C4': (-96.695,25.239,-11.805)
C2': (-96.862,23.370,-10.365)
O2': (-95.757,23.625,-9.523)
N1: (-99.317,23.879,-10.241)
N3: (-101.112,22.613,-9.378)
N4: (-103.051,22.398,-10.546)
C6: (-100.036,24.171,-11.363)
C5: (-101.281,23.708,-11.515)
O3': (-95.201,23.361,-12.162)
OP1: (-98.023,26.389,-15.861)
OP2: (-100.301,25.434,-15.091)
C4: (-101.814,22.898,-10.464)
O5': (-98.350,25.475,-13.551)
C3': (-96.533,23.727,-11.804)
C1': (-97.958,24.385,-10.044)
O4': (-97.788,25.490,-10.889)
C5': (-97.042,25.886,-13.123)
P: (-99.046,26.182,-14.791)
O2: (-99.181,22.854,-8.253)
C4': (-96.695,25.239,-11.805)
C2': (-96.862,23.370,-10.365)
O2': (-95.757,23.625,-9.523)
N1: (-99.317,23.879,-10.241)
N3: (-101.112,22.613,-9.378)
N4: (-103.051,22.398,-10.546)
C6: (-100.036,24.171,-11.363)
C5: (-101.281,23.708,-11.515)
O3': (-95.201,23.361,-12.162)
OP1: (-105.354,21.709,-8.945)
OP2: (-105.534,23.696,-7.324)
C3': (-109.934,23.288,-10.057)
C1': (-111.275,23.708,-8.128)
C5': (-108.417,21.644,-8.794)
O6: (-111.776,27.844,-3.888)
O4': (-110.375,22.665,-7.827)
C8: (-109.893,25.166,-6.584)
C2: (-114.056,26.287,-6.106)
C6: (-112.164,27.121,-4.803)
C5: (-111.410,26.280,-5.622)
C4: (-112.049,25.528,-6.576)
P: (-106.084,22.421,-7.861)
C4': (-109.809,22.159,-9.048)
C2': (-111.212,24.014,-9.628)
O2': (-112.375,23.483,-10.243)
N1: (-113.511,27.067,-5.121)
N2: (-115.384,26.373,-6.267)
N3: (-113.355,25.482,-6.872)
N7: (-110.049,26.050,-5.643)
N9: (-111.075,24.777,-7.157)
O5': (-107.566,22.711,-8.362)
O3': (-110.117,22.604,-11.282)
OP2: (-105.534,23.696,-7.324)
C3': (-109.934,23.288,-10.057)
C1': (-111.275,23.708,-8.128)
C5': (-108.417,21.644,-8.794)
O6: (-111.776,27.844,-3.888)
O4': (-110.375,22.665,-7.827)
C8: (-109.893,25.166,-6.584)
C2: (-114.056,26.287,-6.106)
C6: (-112.164,27.121,-4.803)
C5: (-111.410,26.280,-5.622)
C4: (-112.049,25.528,-6.576)
P: (-106.084,22.421,-7.861)
C4': (-109.809,22.159,-9.048)
C2': (-111.212,24.014,-9.628)
O2': (-112.375,23.483,-10.243)
N1: (-113.511,27.067,-5.121)
N2: (-115.384,26.373,-6.267)
N3: (-113.355,25.482,-6.872)
N7: (-110.049,26.050,-5.643)
N9: (-111.075,24.777,-7.157)
O5': (-107.566,22.711,-8.362)
O3': (-110.117,22.604,-11.282)
Image (generated by PyMOL):