ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A643:A702

Extra

PDB:
ATOM 1 O3' G A 642 168.232 118.703 -61.276 1.00 40.22 O
ATOM 2 P A A 643 169.157 118.119 -62.458 1.00 39.27 P
ATOM 3 OP1 A A 643 170.111 119.210 -62.807 1.00 38.54 O
ATOM 4 OP2 A A 643 168.306 117.513 -63.523 1.00 38.68 O
ATOM 5 O5' A A 643 169.984 116.982 -61.688 1.00 38.48 O
ATOM 6 C5' A A 643 170.599 115.914 -62.404 1.00 36.88 C
ATOM 7 C4' A A 643 170.865 114.731 -61.495 1.00 34.59 C
ATOM 8 O4' A A 643 172.061 114.899 -60.695 1.00 32.37 O
ATOM 9 C3' A A 643 169.839 114.351 -60.452 1.00 33.81 C
ATOM 10 O3' A A 643 168.697 113.735 -61.014 1.00 34.06 O
ATOM 11 C2' A A 643 170.636 113.363 -59.595 1.00 33.72 C
ATOM 12 O2' A A 643 170.649 112.046 -60.115 1.00 33.19 O
ATOM 13 C1' A A 643 172.055 113.927 -59.676 1.00 31.30 C
ATOM 14 N9 A A 643 172.471 114.537 -58.421 1.00 30.10 N
ATOM 15 C8 A A 643 172.356 115.840 -58.014 1.00 31.03 C
ATOM 16 N7 A A 643 172.825 116.061 -56.808 1.00 30.20 N
ATOM 17 C5 A A 643 173.279 114.816 -56.396 1.00 28.69 C
ATOM 18 C6 A A 643 173.901 114.382 -55.216 1.00 27.88 C
ATOM 19 N6 A A 643 174.191 115.188 -54.192 1.00 26.85 N
ATOM 20 N1 A A 643 174.228 113.076 -55.123 1.00 27.32 N
ATOM 21 C2 A A 643 173.953 112.273 -56.156 1.00 29.70 C
ATOM 22 N3 A A 643 173.379 112.565 -57.324 1.00 30.48 N
ATOM 23 C4 A A 643 173.064 113.870 -57.379 1.00 29.61 C
ATOM 24 P G A 644 167.241 114.051 -60.404 1.00 33.78 P
ATOM 25 OP1 G A 644 166.380 114.503 -61.548 1.00 33.70 O
ATOM 26 OP2 G A 644 167.369 114.909 -59.190 1.00 33.77 O
ATOM 27 O5' G A 644 166.730 112.637 -59.948 1.00 31.84 O
TER

ATOM 1 O3' U B 701 172.658 124.294 -47.579 1.00 65.25 O
ATOM 2 P G B 702 172.121 123.148 -48.562 1.00 60.75 P
ATOM 3 OP1 G B 702 170.662 122.980 -48.294 1.00 63.02 O
ATOM 4 OP2 G B 702 173.037 121.995 -48.383 1.00 61.42 O
ATOM 5 O5' G B 702 172.252 123.754 -50.033 1.00 54.96 O
ATOM 6 C5' G B 702 171.475 124.892 -50.438 1.00 48.33 C
ATOM 7 C4' G B 702 170.991 124.733 -51.865 1.00 43.81 C
ATOM 8 O4' G B 702 172.133 124.486 -52.731 1.00 43.03 O
ATOM 9 C3' G B 702 170.062 123.567 -52.152 1.00 42.59 C
ATOM 10 O3' G B 702 168.695 123.801 -51.827 1.00 42.12 O
ATOM 11 C2' G B 702 170.283 123.327 -53.643 1.00 41.14 C
ATOM 12 O2' G B 702 169.595 124.213 -54.492 1.00 41.42 O
ATOM 13 C1' G B 702 171.780 123.579 -53.768 1.00 39.56 C
ATOM 14 N9 G B 702 172.477 122.313 -53.541 1.00 35.84 N
ATOM 15 C8 G B 702 173.208 121.952 -52.435 1.00 33.29 C
ATOM 16 N7 G B 702 173.620 120.716 -52.475 1.00 33.24 N
ATOM 17 C5 G B 702 173.155 120.235 -53.694 1.00 32.79 C
ATOM 18 C6 G B 702 173.278 118.945 -54.283 1.00 32.22 C
ATOM 19 O6 G B 702 173.830 117.935 -53.822 1.00 31.75 O
ATOM 20 N1 G B 702 172.662 118.892 -55.531 1.00 31.07 N
ATOM 21 C2 G B 702 172.007 119.938 -56.132 1.00 31.42 C
ATOM 22 N2 G B 702 171.480 119.689 -57.343 1.00 31.11 N
ATOM 23 N3 G B 702 171.876 121.139 -55.588 1.00 31.51 N
ATOM 24 C4 G B 702 172.471 121.214 -54.377 1.00 33.17 C
ATOM 25 P G B 703 167.731 122.540 -51.531 1.00 38.84 P
ATOM 26 OP1 G B 703 166.375 123.055 -51.215 1.00 41.42 O
ATOM 27 OP2 G B 703 168.430 121.648 -50.568 1.00 39.44 O
ATOM 28 O5' G B 703 167.605 121.821 -52.924 1.00 36.77 O
TER

Atoms:
OP1: (170.111,119.210,-62.807)
OP2: (168.306,117.513,-63.523)
C3': (169.839,114.351,-60.452)
C1': (172.055,113.927,-59.676)
C5': (170.599,115.914,-62.404)
O4': (172.061,114.899,-60.695)
C8: (172.356,115.840,-58.014)
O2': (170.649,112.046,-60.115)
C6: (173.901,114.382,-55.216)
C5: (173.279,114.816,-56.396)
C4: (173.064,113.870,-57.379)
P: (169.157,118.119,-62.458)
C4': (170.865,114.731,-61.495)
C2': (170.636,113.363,-59.595)
C2: (173.953,112.273,-56.156)
N1: (174.228,113.076,-55.123)
N3: (173.379,112.565,-57.324)
N6: (174.191,115.188,-54.192)
N7: (172.825,116.061,-56.808)
N9: (172.471,114.537,-58.421)
O5': (169.984,116.982,-61.688)
O3': (168.697,113.735,-61.014)
OP1: (170.662,122.980,-48.294)
OP2: (173.037,121.995,-48.383)
C3': (170.062,123.567,-52.152)
C1': (171.780,123.579,-53.768)
C5': (171.475,124.892,-50.438)
O6: (173.830,117.935,-53.822)
O4': (172.133,124.486,-52.731)
C8: (173.208,121.952,-52.435)
C2: (172.007,119.938,-56.132)
C6: (173.278,118.945,-54.283)
C5: (173.155,120.235,-53.694)
C4: (172.471,121.214,-54.377)
P: (172.121,123.148,-48.562)
C4': (170.991,124.733,-51.865)
C2': (170.283,123.327,-53.643)
O2': (169.595,124.213,-54.492)
N1: (172.662,118.892,-55.531)
N2: (171.480,119.689,-57.343)
N3: (171.876,121.139,-55.588)
N7: (173.620,120.716,-52.475)
N9: (172.477,122.313,-53.541)
O5': (172.252,123.754,-50.033)
O3': (168.695,123.801,-51.827)
Image (generated by PyMOL):
PyMOL image
show in jmol