Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02321:02325
Extra
PDB:
ATOM 1 O3' A A2320 60.389 115.529 78.507 1.00 27.76 O
ATOM 2 P G A2321 59.331 116.225 79.489 1.00 27.17 P
ATOM 3 OP1 G A2321 58.179 116.561 78.627 1.00 26.68 O
ATOM 4 OP2 G A2321 59.975 117.289 80.296 1.00 26.71 O
ATOM 5 O5' G A2321 58.888 115.036 80.445 1.00 27.35 O
ATOM 6 C5' G A2321 59.176 115.049 81.846 1.00 27.10 C
ATOM 7 C4' G A2321 59.485 113.652 82.299 1.00 28.12 C
ATOM 8 O4' G A2321 60.879 113.353 82.026 1.00 28.59 O
ATOM 9 C3' G A2321 59.352 113.382 83.782 1.00 28.43 C
ATOM 10 O3' G A2321 57.998 113.146 84.102 1.00 28.41 O
ATOM 11 C2' G A2321 60.201 112.129 83.939 1.00 27.78 C
ATOM 12 O2' G A2321 59.545 110.981 83.456 1.00 25.56 O
ATOM 13 C1' G A2321 61.376 112.457 83.012 1.00 28.35 C
ATOM 14 N9 G A2321 62.450 113.123 83.747 1.00 29.64 N
ATOM 15 C8 G A2321 62.819 114.445 83.673 1.00 29.77 C
ATOM 16 N7 G A2321 63.767 114.759 84.512 1.00 30.95 N
ATOM 17 C5 G A2321 64.052 113.571 85.169 1.00 29.67 C
ATOM 18 C6 G A2321 64.980 113.294 86.199 1.00 29.99 C
ATOM 19 O6 G A2321 65.765 114.068 86.758 1.00 30.72 O
ATOM 20 N1 G A2321 64.937 111.958 86.578 1.00 30.34 N
ATOM 21 C2 G A2321 64.108 111.012 86.037 1.00 28.04 C
ATOM 22 N2 G A2321 64.203 109.787 86.548 1.00 26.09 N
ATOM 23 N3 G A2321 63.245 111.254 85.071 1.00 28.94 N
ATOM 24 C4 G A2321 63.265 112.547 84.692 1.00 29.12 C
ATOM 25 P G A2322 57.459 113.480 85.570 1.00 32.39 P
ATOM 26 OP1 G A2322 55.985 113.322 85.498 1.00 31.72 O
ATOM 27 OP2 G A2322 58.038 114.770 86.017 1.00 31.01 O
ATOM 28 O5' G A2322 58.062 112.334 86.497 1.00 28.68 O
TER
ATOM 1 O3' A B2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 2 P U B2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 3 OP1 U B2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 4 OP2 U B2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 5 O5' U B2325 62.160 103.993 93.708 1.00 39.08 O
ATOM 6 C5' U B2325 63.028 103.624 94.792 1.00 37.36 C
ATOM 7 C4' U B2325 64.033 104.720 95.041 1.00 38.54 C
ATOM 8 O4' U B2325 64.799 104.952 93.823 1.00 38.66 O
ATOM 9 C3' U B2325 63.417 106.064 95.405 1.00 38.93 C
ATOM 10 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 11 C2' U B2325 63.306 106.748 94.048 1.00 38.30 C
ATOM 12 O2' U B2325 63.239 108.157 94.127 1.00 38.81 O
ATOM 13 C1' U B2325 64.594 106.279 93.376 1.00 38.44 C
ATOM 14 N1 U B2325 64.528 106.281 91.906 1.00 38.82 N
ATOM 15 C2 U B2325 65.144 107.328 91.225 1.00 39.40 C
ATOM 16 O2 U B2325 65.776 108.211 91.782 1.00 38.55 O
ATOM 17 N3 U B2325 64.999 107.297 89.862 1.00 40.08 N
ATOM 18 C4 U B2325 64.336 106.346 89.117 1.00 40.97 C
ATOM 19 O4 U B2325 64.263 106.479 87.896 1.00 41.75 O
ATOM 20 C5 U B2325 63.753 105.286 89.883 1.00 41.36 C
ATOM 21 C6 U B2325 63.864 105.289 91.217 1.00 39.39 C
ATOM 22 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 23 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 24 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 25 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
TER
ATOM 2 P G A2321 59.331 116.225 79.489 1.00 27.17 P
ATOM 3 OP1 G A2321 58.179 116.561 78.627 1.00 26.68 O
ATOM 4 OP2 G A2321 59.975 117.289 80.296 1.00 26.71 O
ATOM 5 O5' G A2321 58.888 115.036 80.445 1.00 27.35 O
ATOM 6 C5' G A2321 59.176 115.049 81.846 1.00 27.10 C
ATOM 7 C4' G A2321 59.485 113.652 82.299 1.00 28.12 C
ATOM 8 O4' G A2321 60.879 113.353 82.026 1.00 28.59 O
ATOM 9 C3' G A2321 59.352 113.382 83.782 1.00 28.43 C
ATOM 10 O3' G A2321 57.998 113.146 84.102 1.00 28.41 O
ATOM 11 C2' G A2321 60.201 112.129 83.939 1.00 27.78 C
ATOM 12 O2' G A2321 59.545 110.981 83.456 1.00 25.56 O
ATOM 13 C1' G A2321 61.376 112.457 83.012 1.00 28.35 C
ATOM 14 N9 G A2321 62.450 113.123 83.747 1.00 29.64 N
ATOM 15 C8 G A2321 62.819 114.445 83.673 1.00 29.77 C
ATOM 16 N7 G A2321 63.767 114.759 84.512 1.00 30.95 N
ATOM 17 C5 G A2321 64.052 113.571 85.169 1.00 29.67 C
ATOM 18 C6 G A2321 64.980 113.294 86.199 1.00 29.99 C
ATOM 19 O6 G A2321 65.765 114.068 86.758 1.00 30.72 O
ATOM 20 N1 G A2321 64.937 111.958 86.578 1.00 30.34 N
ATOM 21 C2 G A2321 64.108 111.012 86.037 1.00 28.04 C
ATOM 22 N2 G A2321 64.203 109.787 86.548 1.00 26.09 N
ATOM 23 N3 G A2321 63.245 111.254 85.071 1.00 28.94 N
ATOM 24 C4 G A2321 63.265 112.547 84.692 1.00 29.12 C
ATOM 25 P G A2322 57.459 113.480 85.570 1.00 32.39 P
ATOM 26 OP1 G A2322 55.985 113.322 85.498 1.00 31.72 O
ATOM 27 OP2 G A2322 58.038 114.770 86.017 1.00 31.01 O
ATOM 28 O5' G A2322 58.062 112.334 86.497 1.00 28.68 O
TER
ATOM 1 O3' A B2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 2 P U B2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 3 OP1 U B2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 4 OP2 U B2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 5 O5' U B2325 62.160 103.993 93.708 1.00 39.08 O
ATOM 6 C5' U B2325 63.028 103.624 94.792 1.00 37.36 C
ATOM 7 C4' U B2325 64.033 104.720 95.041 1.00 38.54 C
ATOM 8 O4' U B2325 64.799 104.952 93.823 1.00 38.66 O
ATOM 9 C3' U B2325 63.417 106.064 95.405 1.00 38.93 C
ATOM 10 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 11 C2' U B2325 63.306 106.748 94.048 1.00 38.30 C
ATOM 12 O2' U B2325 63.239 108.157 94.127 1.00 38.81 O
ATOM 13 C1' U B2325 64.594 106.279 93.376 1.00 38.44 C
ATOM 14 N1 U B2325 64.528 106.281 91.906 1.00 38.82 N
ATOM 15 C2 U B2325 65.144 107.328 91.225 1.00 39.40 C
ATOM 16 O2 U B2325 65.776 108.211 91.782 1.00 38.55 O
ATOM 17 N3 U B2325 64.999 107.297 89.862 1.00 40.08 N
ATOM 18 C4 U B2325 64.336 106.346 89.117 1.00 40.97 C
ATOM 19 O4 U B2325 64.263 106.479 87.896 1.00 41.75 O
ATOM 20 C5 U B2325 63.753 105.286 89.883 1.00 41.36 C
ATOM 21 C6 U B2325 63.864 105.289 91.217 1.00 39.39 C
ATOM 22 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 23 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 24 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 25 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
TER
Atoms:
OP1: (58.179,116.561,78.627)
OP2: (59.975,117.289,80.296)
C3': (59.352,113.382,83.782)
C1': (61.376,112.457,83.012)
C5': (59.176,115.049,81.846)
O6: (65.765,114.068,86.758)
O4': (60.879,113.353,82.026)
C8: (62.819,114.445,83.673)
C2: (64.108,111.012,86.037)
C6: (64.980,113.294,86.199)
C5: (64.052,113.571,85.169)
C4: (63.265,112.547,84.692)
P: (59.331,116.225,79.489)
C4': (59.485,113.652,82.299)
C2': (60.201,112.129,83.939)
O2': (59.545,110.981,83.456)
N1: (64.937,111.958,86.578)
N2: (64.203,109.787,86.548)
N3: (63.245,111.254,85.071)
N7: (63.767,114.759,84.512)
N9: (62.450,113.123,83.747)
O5': (58.888,115.036,80.445)
O3': (57.998,113.146,84.102)
OP2: (59.975,117.289,80.296)
C3': (59.352,113.382,83.782)
C1': (61.376,112.457,83.012)
C5': (59.176,115.049,81.846)
O6: (65.765,114.068,86.758)
O4': (60.879,113.353,82.026)
C8: (62.819,114.445,83.673)
C2: (64.108,111.012,86.037)
C6: (64.980,113.294,86.199)
C5: (64.052,113.571,85.169)
C4: (63.265,112.547,84.692)
P: (59.331,116.225,79.489)
C4': (59.485,113.652,82.299)
C2': (60.201,112.129,83.939)
O2': (59.545,110.981,83.456)
N1: (64.937,111.958,86.578)
N2: (64.203,109.787,86.548)
N3: (63.245,111.254,85.071)
N7: (63.767,114.759,84.512)
N9: (62.450,113.123,83.747)
O5': (58.888,115.036,80.445)
O3': (57.998,113.146,84.102)
C4: (64.336,106.346,89.117)
N3: (64.999,107.297,89.862)
OP1: (60.522,102.139,94.011)
OP2: (59.890,104.565,94.563)
C2: (65.144,107.328,91.225)
C1': (64.594,106.279,93.376)
C3': (63.417,106.064,95.405)
O5': (62.160,103.993,93.708)
O4': (64.799,104.952,93.823)
C5': (63.028,103.624,94.792)
P: (60.621,103.589,93.711)
C4': (64.033,104.720,95.041)
C2': (63.306,106.748,94.048)
O2': (63.239,108.157,94.127)
N1: (64.528,106.281,91.906)
O4: (64.263,106.479,87.896)
O2: (65.776,108.211,91.782)
C6: (63.864,105.289,91.217)
C5: (63.753,105.286,89.883)
O3': (64.315,106.770,96.256)
N3: (64.999,107.297,89.862)
OP1: (60.522,102.139,94.011)
OP2: (59.890,104.565,94.563)
C2: (65.144,107.328,91.225)
C1': (64.594,106.279,93.376)
C3': (63.417,106.064,95.405)
O5': (62.160,103.993,93.708)
O4': (64.799,104.952,93.823)
C5': (63.028,103.624,94.792)
P: (60.621,103.589,93.711)
C4': (64.033,104.720,95.041)
C2': (63.306,106.748,94.048)
O2': (63.239,108.157,94.127)
N1: (64.528,106.281,91.906)
O4: (64.263,106.479,87.896)
O2: (65.776,108.211,91.782)
C6: (63.864,105.289,91.217)
C5: (63.753,105.286,89.883)
O3': (64.315,106.770,96.256)
Image (generated by PyMOL):